메뉴 건너뛰기




Volumn 10, Issue 3, 2011, Pages 177-190

PCR-based analysis of microbial communities during the EuroGeoMars campaign at Mars Desert Research Station, Utah

Author keywords

astrobiology; life detection; Mars Desert Research Station; microbial communities; PCR instrumentation; ribosomal DNA

Indexed keywords

BIOMARKER; DETECTION METHOD; DNA; EXPERIMENTAL STUDY; LABORATORY METHOD; MARS; MICROBIAL ACTIVITY; MOLECULAR ECOLOGY; OPTIMIZATION; PLANETARY SURFACE; POLYMERASE CHAIN REACTION; RESEARCH INSTITUTION;

EID: 79959345558     PISSN: 14735504     EISSN: 14753006     Source Type: Journal    
DOI: 10.1017/S1473550411000073     Document Type: Article
Times cited : (20)

References (56)
  • 1
    • 79959339837 scopus 로고    scopus 로고
    • Available online at accessed 20 October 2010
    • Ahram Biosystems (2010). Available online at http://www.ahrambio.com/ product.html (accessed 20 October 2010).
    • (2010) Ahram Biosystems
  • 2
    • 0001723098 scopus 로고
    • La suspension de la vie au dessous de 1/20K absolu par démagnétisation adiabatique de l'alun de fer dans le vide le plus elevé
    • Becquerel, P. (1950). La suspension de la vie au dessous de 1/20K absolu par démagnétisation adiabatique de l'alun de fer dans le vide le plus elevé. C. R. Hebd. Séances Acad. Sci. Paris 231, 261-263.
    • (1950) C. R. Hebd. Séances Acad. Sci. Paris , vol.231 , pp. 261-263
    • Becquerel, P.1
  • 6
    • 18144421536 scopus 로고    scopus 로고
    • Radiative habitable zones in martian polar environments
    • DOI 10.1016/j.icarus.2004.12.009, PII S0019103504004348
    • Córdoba-Jabonero, C., Zorzano, M.P., Selsis, F., Patel, M.R. & Cockell, C.S. (2005). Radiative zones in Martian polar environments. Icarus 175, 360-371. (Pubitemid 40621531)
    • (2005) Icarus , vol.175 , Issue.2 , pp. 360-371
    • Cordoba-Jabonero, C.1    Zorzano, M.-P.2    Selsis, F.3    Patel, M.R.4    Cockell, C.S.5
  • 7
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • DeLong, E.F. (1992). Archaea in coastal marine environments. Proc. Natl. Acad. Sci. U.S.A. 89, 5685-5689.
    • (1992) Proc. Natl. Acad. Sci. U.S.A. , vol.89 , pp. 5685-5689
    • Delong, E.F.1
  • 8
    • 79959326629 scopus 로고    scopus 로고
    • A wide variety of extremophiles and large beta-diversity at the Mars Desert Research Station (Utah)
    • Direito, S.O.L., Ehrenfreund, P., Marees, A., Staats, M., Foing, B. & Röling, W.F.M. (2011). A wide variety of extremophiles and large beta-diversity at the Mars Desert Research Station (Utah). Int. J. Astrobiol. 10, 191-207.
    • (2011) Int. J. Astrobiol. , vol.10 , pp. 191-207
    • Direito, S.O.L.1    Ehrenfreund, P.2    Marees, A.3    Staats, M.4    Foing, B.5    Röling, W.F.M.6
  • 13
    • 70349605827 scopus 로고    scopus 로고
    • Bacterial spores in granite survive hypervelocity launch by spallation: Implications for lithopanspermia
    • Fajardo-Cavazos, P., Langenhorst, F., Melosh, H.J. & Nicholson, W.L. (2009). Bacterial spores in granite survive hypervelocity launch by spallation: implications for lithopanspermia. Astrobiology 9, 647-657.
    • (2009) Astrobiology , vol.9 , pp. 647-657
    • Fajardo-Cavazos, P.1    Langenhorst, F.2    Melosh, H.J.3    Nicholson, W.L.4
  • 14
    • 31944439522 scopus 로고    scopus 로고
    • Bacillus subtilis spores on artificial meteorites survive hypervelocity atmospheric entry: Implications for lithopanspermia
    • DOI 10.1089/ast.2005.5.726
    • Fajardo-Cavazos, P., Link, L., Melosh, H.J. & Nicholson, W.L. (2005). Bacillus subtilis spores on artificial meteorites survive hypervelocity atmospheric entry: implications for Lithopanspermia. Astrobiology 5, 726-736. (Pubitemid 43185852)
    • (2005) Astrobiology , vol.5 , Issue.6 , pp. 726-736
    • Fajardo-Cavazos, P.1    Link, L.2    Melosh, H.J.3    Nicholson, W.L.4
  • 15
    • 77953600892 scopus 로고    scopus 로고
    • Exposure of DNA and Bacillus subtilis spores to simulated Martian environments: Use of quantitative PCR (qPCR) to measure inactivation rates of DNA to function as a template molecule
    • Fajardo-Cavazos, P., Schuerger, A.C. & Nicholson, W.L. (2010). Exposure of DNA and Bacillus subtilis spores to simulated Martian environments: use of quantitative PCR (qPCR) to measure inactivation rates of DNA to function as a template molecule. Astrobiology 10, 403-411.
    • (2010) Astrobiology , vol.10 , pp. 403-411
    • Fajardo-Cavazos, P.1    Schuerger, A.C.2    Nicholson, W.L.3
  • 16
    • 84859307755 scopus 로고    scopus 로고
    • EuroGeoMars Campaign: Last Rotation Crew 77. End of Rotation Report (online). Available at accessed 1 November 2010
    • Foing,B. (2009). Summary Report. EuroGeoMars Campaign: Last Rotation Crew 77. End of Rotation Report (online). Available at http://desert. marssociety.org/mdrs/fs08/0227/summary.asp (accessed 1 November 2010).
    • (2009) Summary Report
    • Foing, B.1
  • 23
    • 35548935238 scopus 로고    scopus 로고
    • Could life travel across interplanetary space? Panspermia revisited
    • ed. Rothschild, L.J. & Lister, A.M. London: Academic Press
    • Horneck, G. (2003). Could life travel across interplanetary space? Panspermia revisited. In Evolution on Planet Earth: The Impact of the Physical Environment, ed. Rothschild, L.J. & Lister, A.M., pp. 109-127. London: Academic Press.
    • (2003) Evolution on Planet Earth: The Impact of the Physical Environment , pp. 109-127
    • Horneck, G.1
  • 24
    • 48549091185 scopus 로고    scopus 로고
    • The microbial case for Mars and its implication for human expeditions to Mars
    • Horneck, G. (2008b). The microbial case for Mars and its implication for human expeditions to Mars. Acta Astronaut. 63, 1015-1024.
    • (2008) Acta Astronaut. , vol.63 , pp. 1015-1024
    • Horneck, G.1
  • 25
    • 39749142110 scopus 로고    scopus 로고
    • Microbial rock inhabitants survive hypervelocity impacts on mars-like host planets: First phase of lithopanspermia experimentally tested
    • DOI 10.1089/ast.2007.0134
    • Horneck, G., Stöffler, D., Ott, S., Hornemann, U., Cockell, C.S., Moeller, R., Meyer, C., de Vera, J.P., Fritz, J., Schade, S. et al. (2008a). Microbial rock inhabitants survive hypervelocity impacts on Mars-like host planets: first phase of lithopanspermia experimentally tested. Astrobiology 8, 17-44. (Pubitemid 351309892)
    • (2008) Astrobiology , vol.8 , Issue.1 , pp. 17-44
    • Horneck, G.1    Stoffler, D.2    Ott, S.3    Hornemann, U.4    Cockell, C.S.5    Moeller, R.6    Meyer, C.7    De Vera, J.-P.8    Fritz, J.9    Schade, S.10    Artemieva, N.A.11
  • 26
    • 18144401354 scopus 로고    scopus 로고
    • The Paleome: A sedimentary genetic record of past microbial communities
    • DOI 10.1089/ast.2005.5.141
    • Inagaki, F., Okada, H., Tsapin, A.I. & Nealson, K.H. (2005). Microbial survival: the paleome: a sedimentary genetic record of past microbial communities. Astrobiology 5, 141-153. (Pubitemid 40621746)
    • (2005) Astrobiology , vol.5 , Issue.2 , pp. 141-153
    • Inagaki, F.1    Okada, H.2    Tsapin, A.I.3    Nealson, K.H.4
  • 29
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • ed. Stackebrandt, E. & Goodfellow M. Wiley, New York
    • Lane, D.J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, ed. Stackebrandt, E. & Goodfellow, M., pp. 115-175. Wiley, New York.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 30
    • 0027278557 scopus 로고
    • Instability and decay of the primary structure of DNA
    • DOI 10.1038/362709a0
    • Lindahl, T. (1993). Instability and decay of the primary structure of DNA. Nature 362, 709-715. (Pubitemid 23125973)
    • (1993) Nature , vol.362 , Issue.6422 , pp. 709-715
    • Lindahl, T.1
  • 32
    • 55049124330 scopus 로고    scopus 로고
    • Role of DNA protection and repair in resistance of Bacillus subtilis spores to ultrahigh shock pressures simulating hypervelocity impacts
    • Moeller, R., Horneck, G., Rabbow, E., Reitz, G., Meyer, C., Hornemann, U. & Stöffler, D. (2008). Role of DNA protection and repair in resistance of Bacillus subtilis spores to ultrahigh shock pressures simulating hypervelocity impacts. Appl. Environ. Microbiol. 74, 6682-6689.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 6682-6689
    • Moeller, R.1    Horneck, G.2    Rabbow, E.3    Reitz, G.4    Meyer, C.5    Hornemann, U.6    Stöffler, D.7
  • 33
    • 77953050113 scopus 로고    scopus 로고
    • Molecular analysis of the microbial communities of Mars analog lakes in Western Australia
    • Mormile, M.R., Hong, B.Y. & Benison, K.C. (2009). Molecular analysis of the microbial communities of Mars analog lakes in Western Australia. Astrobiology 9, 919-930.
    • (2009) Astrobiology , vol.9 , pp. 919-930
    • Mormile, M.R.1    Hong, B.Y.2    Benison, K.C.3
  • 34
    • 0023461268 scopus 로고
    • Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction
    • Mullis, K.B. & Faloona, F.A. (1987). Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol. 155, 335-350.
    • (1987) Methods Enzymol. , vol.155 , pp. 335-350
    • Mullis, K.B.1    Faloona, F.A.2
  • 35
    • 71749121381 scopus 로고    scopus 로고
    • Experimental methods for studying microbial survival in extraterrestrial environments
    • Olsson-Francis, K. & Cockell, C.S. (2010). Experimental methods for studying microbial survival in extraterrestrial environments. J. Microbiol. Methods 80, 1-13.
    • (2010) J. Microbiol. Methods , vol.80 , pp. 1-13
    • Olsson-Francis, K.1    Cockell, C.S.2
  • 38
    • 77149176258 scopus 로고    scopus 로고
    • Growth of microorganisms in Martian-like shallow subsurface conditions: Laboratory modeling
    • Pavlov, A.K., Shelegedina, V.N., Vdovina, M.A. & Pavlov, A.A. (2010). Growth of microorganisms in Martian-like shallow subsurface conditions: laboratory modeling. Int. J. Astrobiol. 9, 51-58.
    • (2010) Int. J. Astrobiol. , vol.9 , pp. 51-58
    • Pavlov, A.K.1    Shelegedina, V.N.2    Vdovina, M.A.3    Pavlov, A.A.4
  • 39
    • 35548929474 scopus 로고    scopus 로고
    • Can identification of a fourth domain of life be made from sequence data alone, and could it be done on Mars?
    • DOI 10.1089/ast.2006.0094
    • Poole, A.M. & Willerslev, E. (2007). Can identification of a fourth domain of life be made from sequence data alone, and could it be done on Mars? Astrobiology 7, 801-814 (Pubitemid 350014784)
    • (2007) Astrobiology , vol.7 , Issue.5 , pp. 801-814
    • Poole, A.M.1    Willerslev, E.2
  • 40
    • 79959356405 scopus 로고    scopus 로고
    • Available online at accessed 20 October 2010
    • Promega (2010). Available online at: http://www.promega.com/maxwell16/ (accessed 20 October 2010)
    • (2010) Promega
  • 41
    • 79959350178 scopus 로고    scopus 로고
    • Available online at accessed 20 October 2010
    • Qiagen (2010). Available online at: http://www.qiagen.com/products/ automation/qiacube.aspx?ShowInfo=1&r=2721 (accessed 20 October 2010).
    • (2010) Qiagen
  • 42
    • 69149097786 scopus 로고    scopus 로고
    • Tardigrade Resistance to Space Effects: First Results of Experiments on the LIFE-TARSE Mission on FOTON-M3 (September 2007)
    • Rebecchi, L., Altiero, T., Guidetti, R., Cesari, M., Bertolani, R., Negroni, M. & Rizzo, A.M. (2009). Tardigrade resistance to space effects: first results of experiments on the LIFE-TARSE mission on FOTON-M3 (September 2007). Astrobiology 9, 581-591.
    • (2009) Astrobiology , vol.9 , pp. 581-591
    • Rebecchi, L.1    Altiero, T.2    Guidetti, R.3    Cesari, M.4    Bertolani, R.5    Negroni, M.6    Rizzo, A.M.7
  • 43
    • 0022372670 scopus 로고
    • Enzymatic amplification of β-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia
    • Saiki, R.K., Scharf, S., Faloona, F., Mullis, K.B., Horn, G.T., Erlich, H.A. & Arnheim, N. (1985). Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science 230, 1350-1354. (Pubitemid 16105164)
    • (1985) Science , vol.230 , Issue.4732 , pp. 1350-1354
    • Saiki, R.K.1    Scharf, S.2    Faloona, F.3
  • 47
    • 79959349855 scopus 로고    scopus 로고
    • Human crew related aspects for astrobiology research
    • Thiel, C.S., Pletser, V. & Foing, B. (2011). Human crew related aspects for astrobiology research. Int. J. Astrobiol. 10, 255-267.
    • (2011) Int. J. Astrobiol. , vol.10 , pp. 255-267
    • Thiel, C.S.1    Pletser, V.2    Foing, B.3
  • 49
    • 0029789623 scopus 로고    scopus 로고
    • A quantitative map of nucleotide substitution rates in bacterial rRNA
    • Van de Peer, Y., Chapelle, S. & de Wachter, R. (1996). A quantitative map of nucleotide substitution rates in bacterial ribosomal subunit RNA. Nucleic Acids Res., 24, 3381-3391. (Pubitemid 26294450)
    • (1996) Nucleic Acids Research , vol.24 , Issue.17 , pp. 3381-3391
    • Van De Peer, Y.1    Chapelle, S.2    De Wachter, R.3
  • 51
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • ed. Innis, N., Gelfand D., Sninsky, J. & White, T. Academic Press, New York
    • White, T.J., Bruns, T.D., Lee, S.B. & Taylor, J.W. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR-Protocols and Applications-A Laboratory Manual, ed. Innis, N., Gelfand, D., Sninsky, J. & White, T., pp. 315-322. Academic Press, New York.
    • (1990) PCR-Protocols and Applications-A Laboratory Manual , pp. 315-322
    • White, T.J.1    Bruns, T.D.2    Lee, S.B.3    Taylor, J.W.4
  • 56
    • 0023184331 scopus 로고
    • Bacterial evolution
    • Woese, C. (1987). Bacterial evolution. Microbiol. Rev. 51, 221-271. (Pubitemid 17082512)
    • (1987) Microbiological Reviews , vol.51 , Issue.2 , pp. 221-271
    • Woese, C.R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.