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Volumn , Issue , 2011, Pages 73-76

Efficient calculation of pairwise nonbonded forces

Author keywords

High Performance Reconfigurable Computing; Molecular Dynamics

Indexed keywords

DESIGN SPACES; FPGA IMPLEMENTATIONS; HIGH PERFORMANCE RECONFIGURABLE COMPUTING; MOLECULAR DYNAMICS SIMULATIONS; NONBONDED INTERACTION; PROTOTYPE IMPLEMENTATIONS; RESOURCE REQUIREMENTS; SIMULATION QUALITY;

EID: 79958742931     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/FCCM.2011.34     Document Type: Conference Paper
Times cited : (24)

References (11)
  • 1
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    • (2010) ACM Transactions on Reconfigurable Technology and Systems , vol.3 , Issue.4
    • Chiu, M.1    Herbordt, M.2
  • 3
    • 70049089977 scopus 로고    scopus 로고
    • D. Hardy, "NAMD-lite," http//www.ks.uiuc.edu/Development/ MDTools/namdlite/, University of Illinois at Urbana-Champaign, 2007.
    • (2007) NAMD-lite
    • Hardy, D.1
  • 6
    • 67650135820 scopus 로고    scopus 로고
    • Efficient table lookup without inverse square roots for calculation of pair wise atomic interactions in classical simulations
    • L. Nilsson, "Efficient table lookup without inverse square roots for calculation of pair wise atomic interactions in classical simulations," J. Computational Chemistry, vol. 30, pp. 1490-1498, 2009.
    • (2009) J. Computational Chemistry , vol.30 , pp. 1490-1498
    • Nilsson, L.1
  • 8
    • 36749115010 scopus 로고
    • The performance implications of thread management alternatives for shared-memory multiprocessors
    • T. Andrea, W. Swope, and H. Anderson, "The performance implications of thread management alternatives for shared-memory multiprocessors," J. of Chemical Physics, vol. 79, no. 9, pp. 4576-4584, 1983.
    • (1983) J. of Chemical Physics , vol.79 , Issue.9 , pp. 4576-4584
    • Andrea, T.1    Swope, W.2    Anderson, H.3
  • 10
    • 18144377695 scopus 로고    scopus 로고
    • Monitoring energy drift with shadow Hamiltonians
    • DOI 10.1016/j.jcp.2004.12.009, PII S0021999104005212
    • R. Engle, R. Skeel, and M. Drees, "Monitoring Energy Drift with Shadow Hamiltonians," J. Computational Physics, vol. 206, pp. 432-452, 2005. (Pubitemid 40621269)
    • (2005) Journal of Computational Physics , vol.206 , Issue.2 , pp. 432-452
    • Engle, R.D.1    Skeel, R.D.2    Drees, M.3
  • 11
    • 22944460220 scopus 로고    scopus 로고
    • Gaussian split ewald: A fast ewald mesh method for molecular simulation
    • Y. Shan, J. Klepeis, M. Eastwood, R. Dror, and D. Shaw, "Gaussian split Ewald: A fast Ewald mesh method for molecular simulation," J. Chemical Physics, vol. 122, no. 4, 2005.
    • (2005) J. Chemical Physics , vol.122 , Issue.4
    • Shan, Y.1    Klepeis, J.2    Eastwood, M.3    Dror, R.4    Shaw, D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.