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Volumn 154, Issue 2-3, 2011, Pages 156-162

Adaptation of AmtR-controlled gene expression by modulation of AmtR binding activity in Corynebacterium glutamicum

Author keywords

Autoregulation; Nitrogen control; Nitrogen regulation; TetR

Indexed keywords

AUTOREGULATIONS; BINDING ACTIVITIES; CORYNEBACTERIUM GLUTAMICUM; IN-VITRO; IN-VIVO; NITROGEN CONTROL; NITROGEN LIMITATION; NITROGEN REGULATION; STRINGENT REGULATIONS; TETR; WILD TYPES;

EID: 79958697326     PISSN: 01681656     EISSN: 18734863     Source Type: Journal    
DOI: 10.1016/j.jbiotec.2010.09.930     Document Type: Article
Times cited : (11)

References (40)
  • 1
    • 85008585468 scopus 로고
    • Taxonomical studies on glutamic acid-producing bacteria
    • Abe S., Takayama K., Kinoshita S. Taxonomical studies on glutamic acid-producing bacteria. J. Gen. Microbiol. 1967, 13:279-301.
    • (1967) J. Gen. Microbiol. , vol.13 , pp. 279-301
    • Abe, S.1    Takayama, K.2    Kinoshita, S.3
  • 2
    • 35448940010 scopus 로고    scopus 로고
    • Phosphate control of phoA, phoC and phoD gene expression in Streptomyces coelicolor reveals significant differences in binding of PhoP to their promoter regions
    • Apel A.K., Sola-Landa A., Rodriguez-Garcia A., Martin J.F. Phosphate control of phoA, phoC and phoD gene expression in Streptomyces coelicolor reveals significant differences in binding of PhoP to their promoter regions. Microbiology 2007, 153:3527-3537.
    • (2007) Microbiology , vol.153 , pp. 3527-3537
    • Apel, A.K.1    Sola-Landa, A.2    Rodriguez-Garcia, A.3    Martin, J.F.4
  • 3
    • 0031877016 scopus 로고    scopus 로고
    • Combining evidence using p-values: application to sequence homology searches
    • Bailey T.L., Gribskov M. Combining evidence using p-values: application to sequence homology searches. Bioinformatics 1998, 14:48-54.
    • (1998) Bioinformatics , vol.14 , pp. 48-54
    • Bailey, T.L.1    Gribskov, M.2
  • 4
    • 0035159923 scopus 로고    scopus 로고
    • Glutamate synthase of Corynebacterium glutamicum is not essential for glutamate synthesis and is regulated by the nitrogen status
    • Beckers G., Nolden L., Burkovski A. Glutamate synthase of Corynebacterium glutamicum is not essential for glutamate synthesis and is regulated by the nitrogen status. Microbiology 2001, 147:2961-2970.
    • (2001) Microbiology , vol.147 , pp. 2961-2970
    • Beckers, G.1    Nolden, L.2    Burkovski, A.3
  • 5
    • 7744241359 scopus 로고    scopus 로고
    • Molecular identification of the urea uptake system and transcriptional analysis of urea transporter- and urease-encoding genes in Corynebacterium glutamicum
    • Beckers G., Bendt A.K., Krämer R., Burkovski A. Molecular identification of the urea uptake system and transcriptional analysis of urea transporter- and urease-encoding genes in Corynebacterium glutamicum. J. Bacteriol. 2004, 186:7645-7652.
    • (2004) J. Bacteriol. , vol.186 , pp. 7645-7652
    • Beckers, G.1    Bendt, A.K.2    Krämer, R.3    Burkovski, A.4
  • 6
    • 26944466128 scopus 로고    scopus 로고
    • Regulation of AmtR-controlled gene expression in Corynebacterium glutamicum: mechanism and characterization of the AmtR regulon
    • Beckers G., Strösser J., Hildebrandt U., Kalinowski J., Farwick M., Krämer R., Burkovski A. Regulation of AmtR-controlled gene expression in Corynebacterium glutamicum: mechanism and characterization of the AmtR regulon. Mol. Microbiol. 2005, 58:580-595.
    • (2005) Mol. Microbiol. , vol.58 , pp. 580-595
    • Beckers, G.1    Strösser, J.2    Hildebrandt, U.3    Kalinowski, J.4    Farwick, M.5    Krämer, R.6    Burkovski, A.7
  • 7
    • 3142622769 scopus 로고    scopus 로고
    • Utilization of creatinine as an alternative nitrogen source in Corynebacterium glutamicum
    • Bendt A.K., Beckers G., Silberbach M., Wittmann A., Burkovski A. Utilization of creatinine as an alternative nitrogen source in Corynebacterium glutamicum. Arch. Microbiol. 2004, 181:443-450.
    • (2004) Arch. Microbiol. , vol.181 , pp. 443-450
    • Bendt, A.K.1    Beckers, G.2    Silberbach, M.3    Wittmann, A.4    Burkovski, A.5
  • 8
    • 0026564643 scopus 로고
    • Molecular analysis of the Corynebacterium glutamicum gdh gene encoding glutamate dehydrogenase
    • Börmann E.R., Eikmanns B.J., Sahm H. Molecular analysis of the Corynebacterium glutamicum gdh gene encoding glutamate dehydrogenase. Mol. Microbiol. 1992, 6:317-326.
    • (1992) Mol. Microbiol. , vol.6 , pp. 317-326
    • Börmann, E.R.1    Eikmanns, B.J.2    Sahm, H.3
  • 9
    • 77955165473 scopus 로고    scopus 로고
    • The transcriptional regulatory repertoire of Corynebacterium glutamicum: reconstruction of the network controlling pathways involved in lysine and glutamate production
    • Brinkrolf K., Schröder S., Pühler A., Tauch A. The transcriptional regulatory repertoire of Corynebacterium glutamicum: reconstruction of the network controlling pathways involved in lysine and glutamate production. J. Biotechnol. 2010, 10.1016/j.jbiotec.2009.12.004.
    • (2010) J. Biotechnol.
    • Brinkrolf, K.1    Schröder, S.2    Pühler, A.3    Tauch, A.4
  • 10
    • 33644596184 scopus 로고    scopus 로고
    • The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum
    • Brune I., Werner H., Hüser A.T., Kalinowski J., Pühler A., Tauch A. The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum. BMC Genomics 2006, 7:21.
    • (2006) BMC Genomics , vol.7 , pp. 21
    • Brune, I.1    Werner, H.2    Hüser, A.T.3    Kalinowski, J.4    Pühler, A.5    Tauch, A.6
  • 11
    • 61649094948 scopus 로고    scopus 로고
    • A combination of transcriptome and metabolome analyses reveals new targets of the Corynebacterium glutamicum nitrogen regulator AmtR
    • Buchinger S., Strösser J., Rehm N., Hänßler E., Hans S., Bathe B., Schomburg D., Krämer R., Burkovski A. A combination of transcriptome and metabolome analyses reveals new targets of the Corynebacterium glutamicum nitrogen regulator AmtR. J. Biotechnol. 2009, 140:68-74.
    • (2009) J. Biotechnol. , vol.140 , pp. 68-74
    • Buchinger, S.1    Strösser, J.2    Rehm, N.3    Hänßler, E.4    Hans, S.5    Bathe, B.6    Schomburg, D.7    Krämer, R.8    Burkovski, A.9
  • 13
    • 0025912270 scopus 로고
    • A family of Corynebacterium glutamicum/Escherichia coli shuttle vectors for cloning, controlled gene expression, and promoter probing
    • Eikmanns B.J., Kleinertz E., Liebl W., Sahm H. A family of Corynebacterium glutamicum/Escherichia coli shuttle vectors for cloning, controlled gene expression, and promoter probing. Gene 1991, 102:93-98.
    • (1991) Gene , vol.102 , pp. 93-98
    • Eikmanns, B.J.1    Kleinertz, E.2    Liebl, W.3    Sahm, H.4
  • 14
    • 0025295967 scopus 로고
    • Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants
    • Grant S.N.G., Jessee J., Bloom F.R., Hanahan D. Differential plasmid rescue from transgenic mouse DNAs into Escherichia coli methylation-restriction mutants. Proc. Natl. Acad. Sci. U.S.A. 1990, 87:4645-4649.
    • (1990) Proc. Natl. Acad. Sci. U.S.A. , vol.87 , pp. 4645-4649
    • Grant, S.N.G.1    Jessee, J.2    Bloom, F.R.3    Hanahan, D.4
  • 15
    • 55749115555 scopus 로고    scopus 로고
    • Molecular mechanisms of nitrogen control in corynebacteria
    • Caister Academic Press, Norwich, A. Burkovski (Ed.)
    • Hänßler E., Burkovski A. Molecular mechanisms of nitrogen control in corynebacteria. Corynebacteria: Genomics and Molecular Biology 2008, 183-201. Caister Academic Press, Norwich. A. Burkovski (Ed.).
    • (2008) Corynebacteria: Genomics and Molecular Biology , pp. 183-201
    • Hänßler, E.1    Burkovski, A.2
  • 17
    • 73449142796 scopus 로고    scopus 로고
    • Crystallization and preliminary analysis of selenomethionine-labelled AmtR from Corynebacterium glutamicum
    • Hasselt K., Sevvana M., Burkovski A., Muller Y.A. Crystallization and preliminary analysis of selenomethionine-labelled AmtR from Corynebacterium glutamicum. Acta Cryst. Sec. F 2009, 65:1123-1127.
    • (2009) Acta Cryst. Sec. F , vol.65 , pp. 1123-1127
    • Hasselt, K.1    Sevvana, M.2    Burkovski, A.3    Muller, Y.A.4
  • 18
    • 0032826179 scopus 로고    scopus 로고
    • Identifying DNA and protein patterns with statistically significant alignments of multiple sequences
    • Hertz G.Z., Stormo G.D. Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. Bioinformatics 1999, 15:563-577.
    • (1999) Bioinformatics , vol.15 , pp. 563-577
    • Hertz, G.Z.1    Stormo, G.D.2
  • 19
    • 0033865395 scopus 로고    scopus 로고
    • AmtR, a global repressor in the nitrogen regulation system of Corynebacterium glutamicum
    • Jakoby M., Nolden L., Meier-Wagner J., Krämer R., Burkovski A. AmtR, a global repressor in the nitrogen regulation system of Corynebacterium glutamicum. Mol. Microbiol. 2000, 37:964-977.
    • (2000) Mol. Microbiol. , vol.37 , pp. 964-977
    • Jakoby, M.1    Nolden, L.2    Meier-Wagner, J.3    Krämer, R.4    Burkovski, A.5
  • 20
    • 0027164654 scopus 로고
    • Isoleucine synthesis in Corynebacterium glutamicum: molecular analysis of the ilvB-ilvN-ilvC operon
    • Keilhauer C., Eggeling L., Sahm H. Isoleucine synthesis in Corynebacterium glutamicum: molecular analysis of the ilvB-ilvN-ilvC operon. J. Bacteriol. 1993, 175:5595-5603.
    • (1993) J. Bacteriol. , vol.175 , pp. 5595-5603
    • Keilhauer, C.1    Eggeling, L.2    Sahm, H.3
  • 21
    • 34547815674 scopus 로고    scopus 로고
    • Plasmid vectors for testing in vivo promoter activites in Corynebacterium glutamicum and Rhodococcus erythropolis
    • Knoppová M., Phensaijai M., Veselý M., Zemanová M., Nešvera J., Pátek M. Plasmid vectors for testing in vivo promoter activites in Corynebacterium glutamicum and Rhodococcus erythropolis. Curr. Microbiol. 2007, 55:234-239.
    • (2007) Curr. Microbiol. , vol.55 , pp. 234-239
    • Knoppová, M.1    Phensaijai, M.2    Veselý, M.3    Zemanová, M.4    Nešvera, J.5    Pátek, M.6
  • 22
    • 0035154822 scopus 로고    scopus 로고
    • Multiplicity of ammonium uptake systems in Corynebacterium glutamicum: role of Amt and AmtB
    • Meier-Wagner J., Nolden L., Jakoby M., Siewe R., Krämer R., Burkovski A. Multiplicity of ammonium uptake systems in Corynebacterium glutamicum: role of Amt and AmtB. Microbiology 2001, 147:135-143.
    • (2001) Microbiology , vol.147 , pp. 135-143
    • Meier-Wagner, J.1    Nolden, L.2    Jakoby, M.3    Siewe, R.4    Krämer, R.5    Burkovski, A.6
  • 25
    • 0035838555 scopus 로고    scopus 로고
    • Glutamine synthetases in Corynebacterium glutamicum: transcriptional control and regulation of activity
    • Nolden L., Farwick M., Krämer R., Burkovski A. Glutamine synthetases in Corynebacterium glutamicum: transcriptional control and regulation of activity. FEMS Microbiol. Lett. 2001, 201:91-98.
    • (2001) FEMS Microbiol. Lett. , vol.201 , pp. 91-98
    • Nolden, L.1    Farwick, M.2    Krämer, R.3    Burkovski, A.4
  • 28
    • 51149094964 scopus 로고    scopus 로고
    • Phosphate-dependent regulation of the low- and high-affinity transport systems in the model actinomycete Streptomyces coelicolor
    • Santos-Beneit F., Rodriguez-Garcia A., Franco-Dominguez E., Martin J.F. Phosphate-dependent regulation of the low- and high-affinity transport systems in the model actinomycete Streptomyces coelicolor. Microbiology 2008, 154:2356-2370.
    • (2008) Microbiology , vol.154 , pp. 2356-2370
    • Santos-Beneit, F.1    Rodriguez-Garcia, A.2    Franco-Dominguez, E.3    Martin, J.F.4
  • 29
    • 0028289983 scopus 로고
    • Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum
    • Schäfer A., Tauch A., Jäger W., Kalinowski J., Thierbach G., Pühler A. Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum. Gene 1994, 145:69-73.
    • (1994) Gene , vol.145 , pp. 69-73
    • Schäfer, A.1    Tauch, A.2    Jäger, W.3    Kalinowski, J.4    Thierbach, G.5    Pühler, A.6
  • 30
    • 0029989297 scopus 로고    scopus 로고
    • Functional and genetic characterization of the (methyl)ammonium uptake carrier of Corynebacterium glutamicum
    • Siewe R.M., Weil B., Burkovski A., Eikmanns B.J., Eikmanns M., Krämer R. Functional and genetic characterization of the (methyl)ammonium uptake carrier of Corynebacterium glutamicum. J. Biol. Chem. 1996, 271:5398-5403.
    • (1996) J. Biol. Chem. , vol.271 , pp. 5398-5403
    • Siewe, R.M.1    Weil, B.2    Burkovski, A.3    Eikmanns, B.J.4    Eikmanns, M.5    Krämer, R.6
  • 32
    • 18444403458 scopus 로고    scopus 로고
    • Adaptation of Corynebacterium glutamicum to ammonium-limitation: a global analysis using transcriptome and proteome techniques
    • Silberbach M., Schäfer M., Hüser A., Kalinowski J., Pühler A., Krämer R., Burkovski A. Adaptation of Corynebacterium glutamicum to ammonium-limitation: a global analysis using transcriptome and proteome techniques. Appl. Environ. Microbiol. 2005, 71:2391-2402.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 2391-2402
    • Silberbach, M.1    Schäfer, M.2    Hüser, A.3    Kalinowski, J.4    Pühler, A.5    Krämer, R.6    Burkovski, A.7
  • 34
    • 40249107679 scopus 로고    scopus 로고
    • Target genes and structure of the direct repeats in the DNA-binding sequence of the response regulator PhoP in Streptomyces coelicolor
    • Sola-Landa A., Rodriguez-Garcia A., Apel A.K., Martin J.F. Target genes and structure of the direct repeats in the DNA-binding sequence of the response regulator PhoP in Streptomyces coelicolor. Nucleic Acids Res. 2008, 36:1358-1368.
    • (2008) Nucleic Acids Res. , vol.36 , pp. 1358-1368
    • Sola-Landa, A.1    Rodriguez-Garcia, A.2    Apel, A.K.3    Martin, J.F.4
  • 35
    • 0024604438 scopus 로고
    • Methods for calculating the probabilities of finding patterns in sequences
    • Staden R. Methods for calculating the probabilities of finding patterns in sequences. Comput. Appl. Biosci. 1989, 5:89-96.
    • (1989) Comput. Appl. Biosci. , vol.5 , pp. 89-96
    • Staden, R.1
  • 36
    • 0025283867 scopus 로고
    • Use of T7 polymerase to direct expression of cloned genes
    • Academic Press, San Diego, CA
    • Studier F.W., Rosenberg A.H., Dunn J.J., Dubendorff J.W. Use of T7 polymerase to direct expression of cloned genes. Methods Enzymol. 1990, 185:60-89. Academic Press, San Diego, CA.
    • (1990) Methods Enzymol. , vol.185 , pp. 60-89
    • Studier, F.W.1    Rosenberg, A.H.2    Dunn, J.J.3    Dubendorff, J.W.4
  • 37
    • 0036137323 scopus 로고    scopus 로고
    • A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
    • Thijs G., Lescot M., Marchal K., Rombauts S., De Moor B., Rouze P., Moreau Y. A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling. Bioinformatics 2001, 17:1113-1122.
    • (2001) Bioinformatics , vol.17 , pp. 1113-1122
    • Thijs, G.1    Lescot, M.2    Marchal, K.3    Rombauts, S.4    De Moor, B.5    Rouze, P.6    Moreau, Y.7
  • 38
    • 33845749560 scopus 로고    scopus 로고
    • Nitrogen metabolism and nitrogen control in corynebacteria: variations of a common theme
    • Walter B., Hänßler E., Kalinowski J., Burkovski A. Nitrogen metabolism and nitrogen control in corynebacteria: variations of a common theme. J. Mol. Microbiol. Biotechnol. 2007, 12:131-138.
    • (2007) J. Mol. Microbiol. Biotechnol. , vol.12 , pp. 131-138
    • Walter, B.1    Hänßler, E.2    Kalinowski, J.3    Burkovski, A.4
  • 39
    • 41549129426 scopus 로고    scopus 로고
    • Dissection of ammonium uptake systems in Corynebacterium glutamicum: mechanism and energetics of AmtA and AmtB
    • Walter B., Küspert M., Ansorge A., Krämer R., Burkovski A. Dissection of ammonium uptake systems in Corynebacterium glutamicum: mechanism and energetics of AmtA and AmtB. J. Bacteriol. 2008, 190:2611-2614.
    • (2008) J. Bacteriol. , vol.190 , pp. 2611-2614
    • Walter, B.1    Küspert, M.2    Ansorge, A.3    Krämer, R.4    Burkovski, A.5
  • 40
    • 33645983933 scopus 로고    scopus 로고
    • The DtxR regulon of Corynebacterium glutamicum
    • Wennerhold J., Bott M. The DtxR regulon of Corynebacterium glutamicum. J. Bacteriol. 2006, 188:2907-2918.
    • (2006) J. Bacteriol. , vol.188 , pp. 2907-2918
    • Wennerhold, J.1    Bott, M.2


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