-
1
-
-
0032900737
-
CRITICA: coding region identification tool invoking comparative analysis
-
Badger, J. H., and G. J. Olsen. 1999. CRITICA: coding region identification tool invoking comparative analysis. Mol. Biol. Evol. 16:512-524.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 512-524
-
-
Badger, J.H.1
Olsen, G.J.2
-
2
-
-
0001284156
-
Ambrosia fungi: a taxonomic revision, and nutritional studies of some species
-
Batra, L. R. 1967. Ambrosia fungi: a taxonomic revision, and nutritional studies of some species. Mycologia 59:976-1017.
-
(1967)
Mycologia
, vol.59
, pp. 976-1017
-
-
Batra, L.R.1
-
4
-
-
0345531106
-
Enzymespecific profiles for genome annotation: PRIAM
-
Claudel-Renard, C., C. Chevalet, T. Faraut, and D. Kahn. 2003. Enzymespecific profiles for genome annotation: PRIAM. Nucleic Acids Res. 31: 6633-6639.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6633-6639
-
-
Claudel-Renard, C.1
Chevalet, C.2
Faraut, T.3
Kahn, D.4
-
5
-
-
34147132825
-
Identifying bacterial genes and endosymbiont DNA with Glimmer
-
Delcher, A. L., K. A. Bratke, E. C. Powers, and S. L. Salzberg. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673-679.
-
(2007)
Bioinformatics
, vol.23
, pp. 673-679
-
-
Delcher, A.L.1
Bratke, K.A.2
Powers, E.C.3
Salzberg, S.L.4
-
6
-
-
0031978181
-
Base-calling of automated sequencer traces using Phred. II. Error probabilities
-
Ewing, B., and P. Green. 1998. Base-calling of automated sequencer traces using Phred. II. Error probabilities. Genome Res. 8:186-194.
-
(1998)
Genome Res
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
7
-
-
0031955518
-
Base-calling of automated sequencer traces using Phred. I. Accuracy assessment
-
Ewing, B., L. Hillier, M. C. Wendl, and P. Green. 1998. Base-calling of automated sequencer traces using Phred. I. Accuracy assessment. Genome Res. 8:175-185.
-
(1998)
Genome Res
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, L.2
Wendl, M.C.3
Green, P.4
-
8
-
-
0031955116
-
Consed: A graphical tool for sequence finishing
-
Gordon, D., C. Abajian, and P. Green. 1998. Consed: A graphical tool for sequence finishing. Genome Res. 8:195-202.
-
(1998)
Genome Res
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
9
-
-
33846555715
-
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
-
Goris, J., et al. 2007. DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. Int. J. Syst. Evol. Microbiol. 57:81-91.
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 81-91
-
-
Goris, J.1
-
10
-
-
22044440860
-
Impact of flooding on soil bacterial communities associated with poplar (Populus sp) trees
-
Graff, A., and R. Conrad. 2005. Impact of flooding on soil bacterial communities associated with poplar (Populus sp.) trees. FEMS Microbiol. Ecol. 53:401-415.
-
(2005)
FEMS Microbiol. Ecol.
, vol.53
, pp. 401-415
-
-
Graff, A.1
Conrad, R.2
-
11
-
-
33751109989
-
Finishing repetitive regions automatically with Dupfinisher
-
H. Valafar (ed.), BIOCOMP'06. CSREA Press, Las Vegas, NV
-
Han, C., and P. Chain. 2006. Finishing repetitive regions automatically with Dupfinisher, p. 142-147. In H. Valafar (ed.), Proceedings of the 2006 International Conference on Bioinformatics Computational Biology, BIOCOMP'06. CSREA Press, Las Vegas, NV.
-
(2006)
Proceedings of the 2006 International Conference on Bioinformatics Computational Biology
, pp. 142-147
-
-
Han, C.1
Chain, P.2
-
12
-
-
75549090213
-
KEGG for representation and analysis of molecular networks involving diseases and drugs
-
Kanehisa, M., S. Goto, M. Furumichi, M. Tanabe, and M. Hirakawa. 2010. KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res. 38:D355-D360.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Kanehisa, M.1
Goto, S.2
Furumichi, M.3
Tanabe, M.4
Hirakawa, M.5
-
13
-
-
34250665888
-
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
-
Lagesen, K., et al. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3100-3108
-
-
Lagesen, K.1
-
14
-
-
0030854739
-
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
-
Lowe, T. M., and S. R. Eddy. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:0955-0964.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 0955-0964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
15
-
-
24044455869
-
Genome sequencing in microfabricated highdensity picolitre reactors
-
Margulies, M., et al. 2005. Genome sequencing in microfabricated highdensity picolitre reactors. Nature 437:376-380.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
-
16
-
-
44349169524
-
Genome sequence of the streptomycin-producing microorganism streptomyces griseus IFO 13350
-
Ohnishi, Y., et al. 2008. Genome sequence of the streptomycin-producing microorganism streptomyces griseus IFO 13350. J. Bacteriol. 190:4050-4060.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 4050-4060
-
-
Ohnishi, Y.1
-
17
-
-
73149098333
-
Shifting the genomic gold standard for the prokaryotic species definition
-
Richter, M., and R. Rosselló-Móra. 2009. Shifting the genomic gold standard for the prokaryotic species definition. Proc. Natl. Acad. Sci. U. S. A. 106: 19126-19131.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 19126-19131
-
-
Richter, M.1
Rosselló-Móra, R.2
-
18
-
-
0033956060
-
The COG database: a tool for genome-scale analysis of protein functions and evolution
-
Tatusov, R. L., M. Y. Galperin, D. A. Natale, and E. V. Koonin. 2000. The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res. 28:33-36.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 33-36
-
-
Tatusov, R.L.1
Galperin, M.Y.2
Natale, D.A.3
Koonin, E.V.4
-
19
-
-
0008210738
-
Streptomycin: background, isolation, properties, and utilization
-
Waksman, S. A. 1953. Streptomycin: background, isolation, properties, and utilization. Science 118:259-266.
-
(1953)
Science
, vol.118
, pp. 259-266
-
-
Waksman, S.A.1
-
20
-
-
43149115851
-
Velvet: algorithms for de novo short read assembly using de Bruijn graphs
-
Zerbino, D. R., and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.
-
(2008)
Genome Res
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
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