Identification and characterization of CdgB, a diguanylate cyclase involved in developmental processes in Streptomyces coelicolor

Journal of Bacteriology

Volumn 193, Issue 12, 2011, Pages 3100-3108

  Tran, Ngat T ^a   Hengst, Chris D Den ^a   Gomez Escribano, Juan Pablo ^a   Buttner, Mark J ^a  

^a JOHN INNES CENTRE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ACTINORHODINE; BACTERIAL ENZYME; CYCLIC DIMERIC GMP B; DIGUANYLATE CYCLASE; UNCLASSIFIED DRUG;

ARTICLE; CELL ADHESION; CELL CULTURE; ENZYME ACTIVITY; ENZYME ANALYSIS; ESCHERICHIA COLI; EXTRACELLULAR MATRIX; GENE DELETION; MYCELIUM; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; PROTEIN EXPRESSION; STREPTOMYCES COELICOLOR;

ANTHRAQUINONES; BACTERIAL PROTEINS; DNA-BINDING PROTEINS; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; PHOSPHORUS-OXYGEN LYASES; STREPTOMYCES COELICOLOR; TRANSCRIPTION FACTORS;

ESCHERICHIA COLI; MYCELIUM (GENUS); STREPTOMYCES; STREPTOMYCES COELICOLOR;

EID: 79958062471     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.01460-10     Document Type: Article

References (46)

1. Aldridge, P., R. Paul, P. Goymer, P. Rainey, and U. Jenal. 2003. Role of the GGDEF regulator PleD in polar development of Caulobacter crescentus. Mol. Microbiol. 47:1695-1708.
2. Boehm, A., et al. 2010. Second messenger-mediated adjustment of bacterial swimming velocity. Cell 141:107-116.
3. Busso, D., B. Delagoutte-Busso, and D. Moras. 2005. Construction of a set Gateway-based destination vectors for high-throughput cloning and expression screening in Escherichia coli. Anal. Biochem. 343:313-321.
4. Chin, K. H., et al. 2010. The cAMP receptor-like protein CLP is a novel c-di-GMP receptor linking cell-cell signaling to virulence gene expression in Xanthomonas campestris. J. Mol. Biol. 396:646-662.
5. Christen, M., B. Christen, M. Folcher, A. Schauerte, and U. Jenal. 2005. Identification and characterization of a cyclic di-GMP-specific phosphodiesterase and its allosteric control by GTP. J. Biol. Chem. 280:30829-30837.
6. Christen, B., et al. 2006. Allosteric control of cyclic di-GMP signaling. J. Biol. Chem. 281:32015-32024.
7. de Jong, W., H. A. Wosten, L. Dijkhuizen, and D. Claessen. 2009. Attachment of Streptomyces coelicolor is mediated by amyloidal fimbriae that are anchored to the cell surface via cellulose. Mol. Microbiol. 73:1128-2240.
8. den Hengst, C. D., et al. 2010. Genes essential for morphological development and antibiotic production in Streptomyces coelicolor are targets of BldD during vegetative growth. Mol. Microbiol. 78:361-379.
9. Elliot, M. A., and B. K. Leskiw. 1999. The BldD protein from Streptomyces coelicolor is a DNA-binding protein. J. Bacteriol. 181:6832-6835.
10. Elliot, M. A., M. J. Bibb, M. J. Buttner, and B. K. Leskiw. 2001. BldD is a direct regulator of key developmental genes in Streptomyces coelicolor A3(2). Mol. Microbiol. 40:257-269.
11. Flärdh, K. 2003. Essential role of DivIVA in polar growth and morphogenesis in Streptomyces coelicolor A3(2). Mol. Microbiol. 49:1523-1536.
12. Flärdh, K., and M. J. Buttner. 2009. Streptomyces morphogenetics: dissecting differentiation in a filamentous bacterium. Nat. Rev. Microbiol. 7:36-49.
13. Galperin, M. Y., A. N. Nikolskaya, and E. V. Koonin. 2001. Novel domains of the prokaryotic two-component signal transduction systems. FEMS Microbiol. Lett. 204:213-214.
14. García, B., et al. 2004. Role of the GGDEF protein family in Salmonella cellulose biosynthesis and biofilm formation. Mol. Microbiol. 54:264-277.
15. Gregory, M. A., R. Till, and M. C. Smith. 2003. Integration site for Streptomyces phage ΦBT1 and development of site-specific integrating vectors. J. Bacteriol. 185:5320-5323.
16. Gust, B., G. L. Challis, K. Fowler, T. Kieser, and K. F. Chater. 2003. Gene replacement by PCR targeting in Streptomyces and its use to identify a protein domain involved in the biosynthesis of the sesquiterpene odour geosmin. Proc. Natl. Acad. Sci. U. S. A. 100:1541-1546.
17. Hempel, A. M., S. Wang, M. Letek, J. A. Gil, and K. Flärdh. 2008. Assemblies of DivIVA mark sites for hyphal branching and can establish new zones of cell wall growth in Streptomyces coelicolor. J. Bacteriol. 90:7579-7583.
18. Hengge, R. 2009. Principles of c-di-GMP signalling in bacteria. Nat. Rev. Microbiol. 7:263-273.
19. Hickman, J. W., and C. S. Harwood. 2008. Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor. Mol. Microbiol. 69:376-389.
20. Hickman, J. W., D. F. Tifrea, and C. S. Harwood. 2005. A chemosensory system that regulates biofilm formation through modulation of cyclic diguanylate levels. Proc. Natl. Acad. Sci. U. S. A. 102:14422-14427.
21. Hong, H. J., M. I. Hutchings, L. M. Hill, and M. J. Buttner. 2005. The role of the novel Fem protein VanK in vancomycin resistance in Streptomyces coelicolor. J. Biol. Chem. 280:13055-13061.
22. Huitema, E., S. Pritchard, D. Matteson, S. K. Radhakrishnan, and P. H. Viollier. 2006. Bacterial birth scar proteins mark future flagellum assembly site. Cell 124:1025-1037.
23. Kader, A., R. Simm, U. Gerstel, M. Morr, and U. Römling. 2006. Hierar-chical involvement of various GGDEF domain proteins in rdar morphotype development of Salmonella enterica serovar Typhimurium. Mol. Microbiol. 60:602-616.
24. Kelemen, G. H., et al. 2001. A connection between stress and development in the multicellular prokaryote Streptomyces coelicolor A3(2). Mol. Microbiol. 40:804-814.
25. Kieser, T., M. J. Bibb, M. J. Buttner, K. F. Chater, and D. A. Hopwood. 2000. Practical Streptomyces genetics. The John Innes Foundation, Norwich, United Kingdom.
26. Lee, V. T., et al. 2007. A cyclic-di-GMP receptor required for bacterial exopolysaccharide production. Mol. Microbiol. 65:1474-1484.
27. Levi, A., and U. Jenal. 2006. Holdfast formation in motile swarmer cells optimizes surface attachment during Caulobacter crescentus development. J. Bacteriol. 188:5315-5318.
28. Merighi, M., V. T. Lee, M. Hyodo, Y. Hayakawa, and S. Lory. 2007. The second messenger bis-(3'-5')-cyclic-GMP and its PilZ domain-containing receptor Alg44 are required for alginate biosynthesis in Pseudomonas aeruginosa. Mol. Microbiol. 65:876-895.
29. Paget, M. S., L. Chamberlin, A. Atrih, S. J. Foster, and M. J. Buttner. 1999. Evidence that the extracytoplasmic function sigma factor σE is required for normal cell wall structure in Streptomyces coelicolor A3(2). J. Bacteriol. 181:204-211.
30. Paul, R., et al. 2004. Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain. Genes Dev. 18:715-727.
31. Pesavento, C., and R. Hengge. 2009. Bacterial nucleotide-based second messengers. Curr. Opin. Microbiol. 12:170-176.
32. Qi, Y., F. Rao, Z. Luo, and Z. X. Liang. 2009. A flavin cofactor-binding PAS domain regulates c-di-GMP synthesis in AxDGC2 from Acetobacter xylinum. Biochemistry 48:10275-10285.
33. Ross, P., et al. 1987. Regulation of cellulose synthesis in Acetobacter xylinum by cyclic diguanylic acid. Nature 325:279-281.
34. Ryan, R. P., et al. 2006. Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover. Proc. Natl. Acad. Sci. U. S. A. 103:6712-6717.
35. Ryan, R. P., Y. Fouhy, J. F. Lucey, and J. M. Dow. 2006. Cyclic di-GMP signaling in bacteria: recent advances and new puzzles. J. Bacteriol. 188: 8327-8334.
36. Ryjenkov, D. A., M. Tarutina, O. V. Moskvin, and M. Gomelsky. 2005. Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: insights into biochemistry of the GGDEF protein domain. J. Bacteriol. 187:1792-1798.
37. Schirmer, T., and U. Jenal. 2009. Structural and mechanistic determinants of c-di-GMP signalling. Nat. Rev. Microbiol. 7:724-735.
38. Schmidt, A. J., D. A. Ryjenkov, and M. Gomelsky. 2005. The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: enzymatically active and inactive EAL domains. J. Bacteriol. 187:4774-4781.
39. Simm, R., M. Morr, A. Kader, M. Nimtz, and U. Römling. 2004. GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility. Mol. Microbiol. 53:1123-1134.
40. Sudarsan, N., et al. 2008. Riboswitches in eubacteria sense the second messenger cyclic di-GMP. Science 321:411-413.
41. Tischler, A. D., and A. Camilli. 2005. Cyclic diguanylate regulates Vibrio cholerae virulence gene expression. Infect. Immun. 73:5873-5882.
42. Wassmann, P., et al. 2007. Structure of BeF3-modified response regulator PleD: implications for diguanylate cyclase activation, catalysis, and feedback inhibition. Structure 15:915-927.
43. Weber, H., C. Pesavento, A. Possling, G. Tischendorf, and R. Hengge. 2006. Cyclic-di-GMP-mediated signalling within the sigma network of Escherichia coli. Mol. Microbiol. 62:1014-1034.
44. Wolfe, A. J., and K. L. Visick. 2008. Get the message out: cyclic-di-GMP regulates multiple levels of flagellum-based motility. J. Bacteriol. 190:463- 475.
45. Xu, H., K. F. Chater, Z. Deng, and M. Tao. 2008. A cellulose synthase-like protein involved in hyphal tip growth and morphological differentiation in Streptomyces. J. Bacteriol. 190:4971-4978.
46. Zogaj, X., M. Nimtz, M. Rohde, W. Bokranz, and U. Römling. 2001. The multicellular morphotypes of Salmonella typhimurium and Escherichia coli produce cellulose as the second component of the extracellular matrix. Mol. Microbiol. 39:1452-1463.