메뉴 건너뛰기




Volumn 6, Issue 6, 2011, Pages 604-613

From IMGT-ONTOLOGY IDENTIFICATION axiom to IMGT standardized keywords: For immunoglobulins (IG), t cell receptors (TR), and conventional genes

Author keywords

[No Author keywords available]

Indexed keywords

IMMUNOGLOBULIN; PROTEOME; T LYMPHOCYTE RECEPTOR; TRANSCRIPTOME;

EID: 79958055455     PISSN: None     EISSN: 15596095     Source Type: Journal    
DOI: 10.1101/pdb.ip82     Document Type: Article
Times cited : (32)

References (35)
  • 2
    • 79958042285 scopus 로고    scopus 로고
    • IMGT/DomainGapAlign: IMGT standardized analysis of amino acid sequences of variable, constant, and groove domains (IG, TR, MH, IgSF, MhSF)
    • Cold Spring Harb Protoc, doi: 10.1101/pdb.prot5636
    • Ehrenmann F, Lefranc M-P. 2011a. IMGT/DomainGapAlign: IMGT standardized analysis of amino acid sequences of variable, constant, and groove domains (IG, TR, MH, IgSF, MhSF). Cold Spring Harb Protoc doi: 10.1101/pdb.prot5636.
    • (2011)
    • Ehrenmann, F.1    Lefranc, M.-P.2
  • 3
    • 79958045184 scopus 로고    scopus 로고
    • IMGT/3Dstructure-DB: Querying the IMGT database for 3D structures in immunology and immunoinformatics (IG or antibodies, TR, MH, RPI, and FPIA)
    • Cold Spring Harb Protoc, doi: 10.1101/pdb.prot5637
    • Ehrenmann F, Lefranc M-P. 2011b. IMGT/3Dstructure-DB: Querying the IMGT database for 3D structures in immunology and immunoinformatics (IG or antibodies, TR, MH, RPI, and FPIA). Cold Spring Harb Protoc doi: 10.1101/pdb.prot5637.
    • (2011)
    • Ehrenmann, F.1    Lefranc, M.-P.2
  • 4
    • 79958045911 scopus 로고    scopus 로고
    • Standardized sequence and structure analysis of antibody using IMGT
    • 2nd ed. (ed. R Kontermann, S Dübel, Springer-Verlag, Berlin/Heidelberg
    • Ehrenmann F, Duroux P, Giudicelli V, Lefranc M-P. 2010a. Standardized sequence and structure analysis of antibody using IMGT. In Antibody engineering, 2nd ed. (ed. R Kontermann, S Dübel), Vol 2, pp. 11-31. Springer-Verlag, Berlin/Heidelberg.
    • (2010) Antibody Engineering , vol.2 , pp. 11-31
    • Ehrenmann, F.1    Duroux, P.2    Giudicelli, V.3    Lefranc, M.-P.4
  • 5
    • 75549091258 scopus 로고    scopus 로고
    • IMGT/3Dstructure-DB and IMGT/DomainGapAlign: A database and a tool for immunoglobulins or antibodies, T cell receptors, MHC, IgSF and MhcSF
    • Ehrenmann F, Kaas Q, Lefranc M-P. 2010b. IMGT/3Dstructure-DB and IMGT/DomainGapAlign: A database and a tool for immunoglobulins or antibodies, T cell receptors, MHC, IgSF and MhcSF. Nucl Acids Res 38: D301-D307.
    • (2010) Nucl Acids Res , vol.38
    • Ehrenmann, F.1    Kaas, Q.2    Lefranc, M.-P.3
  • 6
    • 79958045790 scopus 로고    scopus 로고
    • IMGT/Collier de Perles: IMGT standardized representation of domains (IG, TR, and IgSF variable and constant domains, MH and MhSF groove domains)
    • Cold Spring Harb Protoc, doi: 10.1101/pdb. prot5635
    • Ehrenmann F, Giudicelli V, Brochet X, Lefranc M-P. 2011. IMGT/Collier de Perles: IMGT standardized representation of domains (IG, TR, and IgSF variable and constant domains, MH and MhSF groove domains). Cold Spring Harb Protoc doi: 10.1101/pdb. prot5635.
    • (2011)
    • Ehrenmann, F.1    Giudicelli, V.2    Brochet, X.3    Lefranc, M.-P.4
  • 7
    • 0033493024 scopus 로고    scopus 로고
    • Ontology for Immunogenetics: The IMGT-ONTOLOGY
    • Giudicelli V, Lefranc M-P. 1999. Ontology for Immunogenetics: The IMGT-ONTOLOGY. Bioinformatics 12: 1047-1054.
    • (1999) Bioinformatics , vol.12 , pp. 1047-1054
    • Giudicelli, V.1    Lefranc, M.-P.2
  • 8
    • 79958026088 scopus 로고    scopus 로고
    • IMGT/JunctionAnalysis: IMGT standardized analysis of the V-J and V-D-J junctions of the rearranged immunoglobulins (IG) and T cell receptors (TR)
    • Cold Spring Harb Protoc, doi: 10.1101/pdb.prot5634
    • Giudicelli V, Lefranc M-P. 2011. IMGT/JunctionAnalysis: IMGT standardized analysis of the V-J and V-D-J junctions of the rearranged immunoglobulins (IG) and T cell receptors (TR). Cold Spring Harb Protoc doi: 10.1101/pdb.prot5634.
    • (2011)
    • Giudicelli, V.1    Lefranc, M.-P.2
  • 10
    • 79958045471 scopus 로고    scopus 로고
    • IMGT/V-QUEST: IMGT standardized analysis of the immunoglobulin (IG) and T cell receptor (TR) nucleotide sequences
    • Cold Spring Harb Protoc, doi: 10.1101/pdb.prot5633
    • Giudicelli V, Brochet X, Lefranc M-P. 2011. IMGT/V-QUEST: IMGT standardized analysis of the immunoglobulin (IG) and T cell receptor (TR) nucleotide sequences. Cold Spring Harb Protoc doi: 10.1101/pdb.prot5633.
    • (2011)
    • Giudicelli, V.1    Brochet, X.2    Lefranc, M.-P.3
  • 11
    • 32544458887 scopus 로고    scopus 로고
    • T cell receptor/peptide/MHC molecular characterization and standardized pMHC contact sites in IMGT/3Dstructure-DB
    • Kaas Q, Lefranc M-P. 2005. T cell receptor/peptide/MHC molecular characterization and standardized pMHC contact sites in IMGT/3Dstructure-DB. In Silico Biol 5: 505-528.
    • (2005) Silico Biol , vol.5 , pp. 505-528
    • Kaas, Q.1    Lefranc, M.-P.2
  • 12
    • 34248341854 scopus 로고    scopus 로고
    • IMGT Colliers de Perles: Standardized sequence-structure representations of the IgSF and MhcSF superfamily domains
    • Kaas Q, Lefranc M-P. 2007. IMGT Colliers de Perles: Standardized sequence-structure representations of the IgSF and MhcSF superfamily domains. Curr Bioinform 2: 21-30.
    • (2007) Curr Bioinform , vol.2 , pp. 21-30
    • Kaas, Q.1    Lefranc, M.-P.2
  • 13
    • 46049112076 scopus 로고    scopus 로고
    • IG, TR, MHC, IgSf and MhcSF: What do we learn from the IMGT Colliers de Perles?
    • Kaas Q, Ehrenmann F, Lefranc M-P. 2007. IG, TR, MHC, IgSf and MhcSF: What do we learn from the IMGT Colliers de Perles?. Brief Funct Genomic Proteomic 6: 253-264.
    • (2007) Brief Funct Genomic Proteomic , vol.6 , pp. 253-264
    • Kaas, Q.1    Ehrenmann, F.2    Lefranc, M.-P.3
  • 14
    • 46049113012 scopus 로고    scopus 로고
    • IMGT standardization for molecular characterization of the T cell receptor/peptide/MHC complexes
    • ed. C Schoenbach et al.), Immunomics Reviews, Series of Springer Science and Business Media LLC, Springer, New York
    • Kaas Q, Duprat E, Tourneur G, Lefranc M-P. 2008. IMGT standardization for molecular characterization of the T cell receptor/peptide/MHC complexes. In Immunoinformatics (ed. C Schoenbach et al.), pp. 19-49. Immunomics Reviews, Series of Springer Science and Business Media LLC, Springer, New York.
    • (2008) Immunoinformatics , pp. 19-49
    • Kaas, Q.1    Duprat, E.2    Tourneur, G.3    Lefranc, M.-P.4
  • 15
    • 0343307090 scopus 로고    scopus 로고
    • Unique database numbering system for immunogenetic analysis
    • Lefranc M-P. 1997. Unique database numbering system for immunogenetic analysis. Immunol Today 18: 509.
    • (1997) Immunol Today , vol.18 , pp. 509
    • Lefranc, M.-P.1
  • 16
    • 0032824862 scopus 로고    scopus 로고
    • The IMGT unique numbering for immunoglobulins, T cell receptors and Ig-like domains
    • Lefranc M-P. 1999. The IMGT unique numbering for immunoglobulins, T cell receptors and Ig-like domains. The Immunologist 7: 132-136.
    • (1999) The Immunologist , vol.7 , pp. 132-136
    • Lefranc, M.-P.1
  • 17
    • 79958037727 scopus 로고    scopus 로고
    • IMGT-ONTOLOGY, IMGT databases, tools and Web resources for Immunoinformatics
    • ed. C Schoenbach et al.), Immunomics Reviews, Series of Springer Science and Business Media LLC, Springer, New York
    • Lefranc M-P. 2008. IMGT-ONTOLOGY, IMGT databases, tools and Web resources for Immunoinformatics. In Immunoinformatics (ed. C Schoenbach et al.), pp. 1-18. Immunomics Reviews, Series of Springer Science and Business Media LLC, Springer, New York.
    • (2008) Immunoinformatics , pp. 1-18
    • Lefranc, M.-P.1
  • 18
    • 79958062905 scopus 로고    scopus 로고
    • Antibody database and tools: The IMGT experience
    • (ed. A Zhiqiang, John Wiley and Sons Inc, Hoboken, NJ
    • Lefranc M-P. 2009. Antibody database and tools: The IMGT experience. In Therapeutic monoclonal antibodies: From bench to clinic (ed. A Zhiqiang), pp. 91-114. John Wiley and Sons Inc, Hoboken, NJ.
    • (2009) Therapeutic Monoclonal Antibodies: From Bench to Clinic , pp. 91-114
    • Lefranc, M.-P.1
  • 19
    • 79958059559 scopus 로고    scopus 로고
    • IMGT, the international ImMunoGeneTics information system
    • Cold Spring Harb Protoc, doi: 10.1101/pdb.top115
    • Lefranc M-P. 2011a. IMGT, the international ImMunoGeneTics information system. Cold Spring Harb Protoc doi: 10.1101/pdb.top115.
    • (2011)
    • Lefranc, M.-P.1
  • 20
    • 79958028552 scopus 로고    scopus 로고
    • From IMGT-ONTOLOGY DESCRIPTION axiom to IMGT standardized labels: For immunoglobulin (IG) and T cell receptor (TR) sequences and structures
    • Cold Spring Harb Protoc, doi: 10.1101/pdb.ip83
    • Lefranc M-P. 2011b. From IMGT-ONTOLOGY DESCRIPTION axiom to IMGT standardized labels: For immunoglobulin (IG) and T cell receptor (TR) sequences and structures. Cold Spring Harb Protoc doi: 10.1101/pdb.ip83.
    • (2011)
    • Lefranc, M.-P.1
  • 21
    • 79958075726 scopus 로고    scopus 로고
    • From IMGT-ONTOLOGY CLASSIFICATION axiom to IMGT standardized gene and allele nomenclature: For immunoglobulins (IG) and T cell receptors (TR)
    • Cold Spring Harb Protoc, doi: 10.1101/pdb.ip84
    • Lefranc M-P. 2011c. From IMGT-ONTOLOGY CLASSIFICATION axiom to IMGT standardized gene and allele nomenclature: For immunoglobulins (IG) and T cell receptors (TR). Cold Spring Harb Protoc doi: 10.1101/pdb.ip84.
    • (2011)
    • Lefranc, M.-P.1
  • 22
    • 79958044933 scopus 로고    scopus 로고
    • IMGT unique numbering for the variable (V), constant (C), and groove (G) domains of IG, TR, MH, IgSF, and MhSF
    • doi: 10.1101/pdb.ip85
    • Lefranc M-P. 2011d. IMGT unique numbering for the variable (V), constant (C), and groove (G) domains of IG, TR, MH, IgSF, and MhSF. Cold Spring Harb Protoc doi: 10.1101/pdb.ip85.
    • (2011) Cold Spring Harb Protoc
    • Lefranc, M.-P.1
  • 23
    • 79958044933 scopus 로고    scopus 로고
    • IMGT Collier de Perles for the variable (V), constant (C), and groove (G) domains of IG, TR, MH, IgSF, and MhSF
    • Cold Spring Harb Protoc, doi: 10.1101/pdb.ip86
    • Lefranc M-P. 2011e. IMGT Collier de Perles for the variable (V), constant (C), and groove (G) domains of IG, TR, MH, IgSF, and MhSF. Cold Spring Harb Protoc doi: 10.1101/pdb.ip86.
    • (2011)
    • Lefranc, M.-P.1
  • 24
    • 78651406195 scopus 로고    scopus 로고
    • Antibody nomenclature: From IMGT-ONTOLOGY to INN definitions
    • Lefranc M-P. 2011f. Antibody nomenclature: From IMGT-ONTOLOGY to INN definitions. MAbs 3: 1-2.
    • (2011) MAbs , vol.3 , pp. 1-2
    • Lefranc, M.-P.1
  • 30
    • 21444450056 scopus 로고    scopus 로고
    • IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN
    • Lefranc M-P, Duprat E, Kaas Q, Tranne M, Thiriot A, Lefranc G. 2005b. IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN. Dev Comp Immunol 29: 917-938.
    • (2005) Dev Comp Immunol , vol.29 , pp. 917-938
    • Lefranc, M.-P.1    Duprat, E.2    Kaas, Q.3    Tranne, M.4    Thiriot, A.5    Lefranc, G.6
  • 32
    • 46049099840 scopus 로고    scopus 로고
    • IMGT, a system and an ontology that bridge biological and computational spheres in bioinformatics
    • Lefranc M-P, Giudicelli V, Regnier L, Duroux P. 2008. IMGT, a system and an ontology that bridge biological and computational spheres in bioinformatics. Brief Bioinform 9: 263-275.
    • (2008) Brief Bioinform , vol.9 , pp. 263-275
    • Lefranc, M.-P.1    Giudicelli, V.2    Regnier, L.3    Duroux, P.4
  • 35
    • 0036200078 scopus 로고    scopus 로고
    • IMGT gene identification and Colliers de Perles of human immunoglobulin with known 3D structures
    • Ruiz M, Lefranc M-P. 2002. IMGT gene identification and Colliers de Perles of human immunoglobulin with known 3D structures. Immunogenetics 53: 857-883.
    • (2002) Immunogenetics , vol.53 , pp. 857-883
    • Ruiz, M.1    Lefranc, M.-P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.