Development of the visual loop-mediated isothermal amplification assays for seven genetically modified maize events and their application in practical samples analysis

Journal of Agricultural and Food Chemistry

Volumn 59, Issue 11, 2011, Pages 5914-5918

  Chen, Lili ^a,b   Guo, Jinchao ^b   Wang, Qidi ^b   Kai, Guoyin ^a   Yang, Litao ^b  

^a SHANGHAI NORMAL UNIVERSITY   (China)

^b SHANGHAI JIAO TONG UNIVERSITY   (China)

Author keywords

event specific; Genetically modified maize; loop mediated isothermal amplification

Indexed keywords

AGAROSE GEL; EVENT-BASED; EVENT-SPECIFIC; GENETICALLY MODIFIED CROPS; GENETICALLY MODIFIED MAIZE; GENOMIC DNA; GM CROPS; GM MAIZE; LIMITS OF DETECTION; LOOP-MEDIATED ISOTHERMAL AMPLIFICATION; ROUTINE ANALYSIS; SPECIFIC PRIMERS; VISUAL OBSERVATIONS;

CROPS; ELECTROPHORESIS; GENETICALLY MODIFIED PLANTS; POLYMERASE CHAIN REACTION;

ASSAYS;

PRIMER DNA;

ARTICLE; EVALUATION; GENETICS; MAIZE; METHODOLOGY; POLYMERASE CHAIN REACTION; SPECIES DIFFERENCE; TRANSGENIC PLANT;

DNA PRIMERS; PLANTS, GENETICALLY MODIFIED; POLYMERASE CHAIN REACTION; SPECIES SPECIFICITY; ZEA MAYS;

ZEA MAYS;

EID: 79958005948     PISSN: 00218561     EISSN: 15205118     Source Type: Journal    
DOI: 10.1021/jf200459s     Document Type: Article

References (24)

1. James, C. Global status of commercialized biotech/GM crops: 2009. ISAAA Brief, No. 41; ISAAA: Ithaca, NY, 2009.
2. Moreano, F.; Ehlert, A.; Busch, U.; Engel, K. H. Ligation-dependent probe amplification for the simultaneous event-specific detection and relative quantification of DNA from two genetically modified organisms Eur. Food Res. Technol. 2006, 222, 479-485 (Pubitemid 43383246)
3. Morisett, D.; Dobnik, D.; Hamels, S.; Žel, J.; Gruden, K. NAIMA: Target amplification strategy allowing quantitative on-chip detection of GMOs Nucleic Acids Res. 2008, 36, e118
4. Prins, T. W.; van Dijk, J. P.; Beenen, H. G.; Van Hoef, A. M. A.; Voorhuijzen, M. M.; Schoen, C. D.; Aarts, H. J. M.; Kok, E. J. Optimised padlock probe ligation and microarray detection of multiple (nonauthorised) GMOs in a single reaction BMC Genomics 2008, 9, 584
5. Chaouachi, M.; Chupeau, G.; Berard, A.; McKhann, H.; Romaniuk, M.; Giancola, S.; Laval, V.; Bertheau, Y.; Brunel, D. A high-throughput multiplex method adapted for GMO detection J. Agric. Food Chem. 2008, 56, 11596-11606
6. Bai, S. L.; Zhang, J.; Li, S. C.; Chen, H. D.; Terzaghi, W.; Zhang, X.; Chi, X. R.; Tian, J.; Luo, H. X.; Huang, W. S.; Chen, Y.; Zhang, Y. C. Detection of Six Genetically Modified Maize Lines Using Optical Thin-Film Biosensor Chips J. Agric. Food Chem. 2010, 88, 8490-8494
7. Lipp, M.; Shillito, R.; Giroux, R.; Spiegelhalter, F.; Charlton, S.; Pinero, D.; Song, P. Polymerase chain reaction technology as an analytical tool in agricultural biotechnology J. AOAC Int. 2005, 88, 136-155 (Pubitemid 40207025)
8. Farid, E. A. Detection of genetically modified organisms in foods Trends Biotechnol. 2002, 20, 215-223
9. Holst-Jensen, A.; Rønning, S. B.; Løvseth, A.; Berdal, K. G. PCR technology for screening and quantification of genetically modified organisms (GMOs) Anal. Bioanal. Chem. 2003, 375, 985-993 (Pubitemid 40890301)
10. Holck, A.; Vaïtilingom, M.; Didierjean, L.; Rudi, K. 5′-Nuclease PCR for quantitative event-specific detection of the genetically modified Mon810 MaisGard maize Eur. Food Res. Technol. 2002, 214, 449-454
11. Yang, L. T.; Guo, J. C.; Pan, A. H.; Zhang, H. B.; Zhang, K. W.; Wang, Z. M.; Zhang, D. B. Event-specific Quantitative Detection of Nine Genetically Modified Maizes Using One Novel Standard Reference Molecule J. Agric. Food Chem. 2007, 55, 15-24
12. Yang, L. T.; Xu, S. C.; Pan, A. H.; Yin, C. S.; Zhang, K. W.; Wang, Z. Y.; Zhou, Z. G.; Zhang, D. B. Event specific qualitative and quantitative polymerase chain reaction detection of genetically modified MON863 maize based on the 5′-transgene integration sequence J. Agric. Food Chem. 2005, 53, 9312-8
13. Shen, K. L.; Li, X.; Wang, S.; Pan, Y. J.; Shi, Z. H.; Sun, Y. N.; Yang, L. T. Establishment and in-house validation of simplex and duplex PCR methods for event-specific detection of maize SYN-E3272-5 using a new reference molecule J. AOAC Int. 2010, 93, 663-75
14. Li, X.; Yang, L. T.; Zhang, J.; Wang, S.; Shen, K. L.; Pan, L. W.; Zhang, D. B. Simplex and duplex polymerase chain reaction analysis of Herculex RW (59122) maize based on one reference molecule including separated fragments of 5′ integration site and endogenous gene J. AOAC Int. 2009, 92, 1472-83
15. Wang, S.; Li, X.; Yang, L. T.; Shen, K. L.; Zhang, D. B. Development and in-house validation of a reference molecule pMIR604 for simplex and duplex event-specific identification and quantification of GM maize MIR604 Eur. Food Res. Technol. 2009, 230, 239-248
16. Notomi, T.; Okayama, H.; Masubuchi, H.; Yonekawa, T.; Watanabe, K.; Amino, N.; Hase, T. Loop-mediated isothermal amplification of DNA Nucleic Acids Res. 2000, 28, e63
17. Yamazaki, W.; Taguchi, M.; Ishibashi, M.; Nukina, M.; Misawa, N.; Inoue, K. Development of a loop-mediated isothermal amplification assay for sensitive and rapid detection of Campylobacter fetus Vet. Microbiol. 2009, 13, 393-396
18. Hara-Kudo, Y.; Konishi, N.; Ohtsuka, K.; Hiramatsu, R; Tanaka, H.; Konuma, H.; Takatori, K. Detection of verotoxigenic Escherichia coli O157 and O26 in food by plating methods and LAMP method: A collaborative study Int. J. Food Microbiol. 2008, 122, 156-161
19. Yoneyama, T.; Kiyohara, T.; Shimasaki, N.; Kobayashi, G.; Ota, Y.; Notomi, T.; Totsuka, A.; Wakita, T. Rapid and real-time detection of hepatitis A virus by reverse transcription loop-mediated isothermal amplification assay J. Virol. Methods 2007, 145, 162-168 (Pubitemid 47332702)
20. Fukuda, S.; Takao, S.; Kuwayama, M.; Shimazu, Y.; Miyazaki, K. Rapid detection of norovirus from fecal specimens by real-time reverse transcription-loop-mediated isothermal amplification assay J. Clin. Mircobiol. 2006, 44, 1376-1381
21. Iwamoto, T.; Sonobe, T.; Hayashi, K. Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples J. Clin. Microbiol. 2003, 41, 2616-2622 (Pubitemid 36712475)
22. Lee, D.; La Mura, M.; R Allnutt, T.; Powell, W. Detection of genetically modified organisms (GMOs) using isothermal amplification of target sequences BMC Biotechnol. 2009, 9, 7
23. Guan, X. Y.; Guo, J. C.; Shen, P.; Yang, L. T.; Zhang, D. B. Visual and Rapid Detection of Two Genetically Modified Soybean Events Using Loop-mediated Isothermal Amplification Method Food Anal. Methods 2010, 3, 313-320
24. Dong, W.; Yang, L. T.; Shen, K. L.; Kim, B.; Kleter, G. A.; Marvin, H. J.; Guo, R.; Liang, W. Q.; Zhang, D. B. GMDD: A database of GMO detection methods BMC Bioinformatics 2008, 9, 260