Discovery of a genome of a distant relative of chicken anemia virus reveals a new member of the genus Gyrovirus

Archives of Virology

Volumn 156, Issue 6, 2011, Pages 1097-1100

  Rijsewijk, Franciscus A M ^a   dos Santos, Helton F ^a,b   Teixeira, Thais F ^b   Cibulski, Samuel P ^b   Varela, Ana P M ^b   Dezen, Diogenes ^b   Franco, Ana C ^a   Roehe, Paulo M ^a,b  

^a FEDERAL UNIVERSITY OF RIO GRANDE DO SUL   (Brazil)

^b Desidério Finamor Veterinary Research Institute FEPAGRO   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ANIMAL; ANIMAL DISEASE; ARTICLE; BIRD DISEASE; CHICKEN; CIRCOVIRIDAE INFECTION; CLASSIFICATION; DNA SEQUENCE; GENETICS; GYROVIRUS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; VIROLOGY; VIRUS GENOME;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CHICKEN ANEMIA VIRUS; CHICKENS; CIRCOVIRIDAE INFECTIONS; GENOME, VIRAL; GYROVIRUS; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; POULTRY DISEASES; SEQUENCE ANALYSIS, DNA;

AVES; CHICKEN ANEMIA VIRUS; CIRCOVIRIDAE; GYROVIRUS;

EID: 79957883088     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-011-0971-6     Document Type: Article

References (21)

1. Dean FB, Nelson JR, Giesler TL, Lasken RS (2001) Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification. Genome Res 11: 1095-1099.
2. Dezen D, Rijsewijk FA, Teixeira TF, Holz CL, Cibulski SP, Franco AC, Dellagostin AO, Roehe PM (2010) Multiply-primed rolling-circle amplification (MPRCA) of PCV2 genomes: applications on detection, sequencing and virus isolation. Res Vet Sci 88: 436-440.
3. Edmonds M (2002) A history of poly A sequences: from formation to factors to function. Prog Nucl Acid Res Mol Biol 71: 285-389.
4. Heilman DW, Teodoro JG, Green MR (2006) Apoptin nucleocytoplasmic shuttling is required for cell type-specific localization, apoptosis, and recruitment of the anaphase-promoting complex/cyclosome to PML bodies. J Virol 80: 7535-7545.
5. Index of Viruses-Circoviridae (2006) In: ICTVdB-the universal virus database, version 4. In: Büchen-Osmond C (ed) Columbia University, New York. http://www. ncbi. nlm. nih. gov/ICTVdb/Ictv/fs_index. htm.
6. Koch G, van Roozelaar DJ, Verschueren CAJ, van Der Eb AJ, Noteborn MHM (1995) Immunogenic and protective properties of chicken anaemia virus proteins expressed by baculovirus. Vaccine 13: 763-770.
7. Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E (2010) Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces. J Virol 84: 1674-1682.
8. Los M, Panigrahi S, Rashedi I, Mandal S, Stetefeld J, Essmann F, Schulze-Osthoff K (2009) Apoptin, a tumor-selective killer. Biochim Biophys Acta 1793: 1335-1342.
9. Miller MM, Jarosinski KW, Schat KA (2005) Positive and negative regulation of chicken anemia virus transcription. J Virol 79: 2859-2868.
10. Neural Network Promoter Prediction of the Berkeley Drosophila Genome Project. http://www. fruitfly. org/seq_tools/promoter. html.
11. Noteborn MH, de Boer GF, van Roozelaar DJ, Karreman C, Kranenburg O, Vos JG, Jeurissen SH, Hoeben RC, Zantema A, Koch G, van Ormondt H, van der Eb AJ (1991) Characterization of cloned chicken anemia virus DNA that contains all elements for the infectious replication cycle. J Virol 65: 3131-3139.
12. Noteborn MH (2009) Proteins selectively killing tumor cells. Eur J Pharmacol 625: 165-173.
13. ORF Finder NCBI. http://www. ncbi. nlm. nih. gov/gorf/orfig. cgi.
14. Okamoto H, Nishizawa T, Tawara A, Peng Y, Takahashi M, Kishimoto J, Tanaka T, Miyakawa Y, Mayumi M, Peng YH, Nishizawa T, Takahashi M, Ishikawa T, Yoshikawa A, Okamoto H (2002) Analysis of the entire genomes of thirteen TT virus variants classifiable into the fourth and fifth genetic groups, isolated from viremic infants. Arch Virol 147: 21-41.
15. Peters MA, Crabb BS, Washington EA, Browning GF (2006) Site-directed mutagenesis of the VP2 gene of Chicken anemia virus affects virus replication, cytopathology and host-cell MHC class I expression. J Gen Virol 87: 823-831.
16. Phenix KV, Meehan BM, Todd D, McNulty MS (1994) Transcriptional analysis and genome expression of chicken anaemia virus. J Gen Virol 75: 905-909.
17. Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, vol 1, 3rd edn. Cold Spring Harbour Laboratory Press, New York.
18. Schat KA (2009) Chicken anemia virus. Curr Top Microbiol Immunol 331: 151-183.
19. SoftBerry FPROM program. http://www. softberry. ru/berry. phtml?group=programs& subgroup=promoter& topic=fprom.
20. Takahashi K, Iwasa Y, Hijikata M, Mishiro S (2000) Identification of a new human DNA virus (TTV-like mini virus, TLMV) intermediately related to TT virus and chicken anemia virus. Arch Virol 145: 979-993.
21. Yuasa N, Taniguchi T, Yoshida I (1979) Isolation and some characteristics of an agent inducing anemia in chicks. Avian Dis 23: 366-385.