메뉴 건너뛰기




Volumn 27, Issue 11, 2011, Pages 1587-1588

CyClus3D: A Cytoscape plugin for clustering network motifs in integrated networks

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BIOLOGICAL MODEL; CLUSTER ANALYSIS; COMPUTER PROGRAM; GENE REGULATORY NETWORK; PROTEIN ANALYSIS; SIGNAL TRANSDUCTION;

EID: 79957806921     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr182     Document Type: Article
Times cited : (15)

References (15)
  • 1
    • 77953077420 scopus 로고    scopus 로고
    • Aglobal protein kinase and phosphatase interaction network in yeast
    • Breitkreutz,A. et al. (2010) Aglobal protein kinase and phosphatase interaction network in yeast. Science, 328, 1043.
    • (2010) Science , vol.328 , pp. 1043
    • Breitkreutz, A.1
  • 3
    • 61349119934 scopus 로고    scopus 로고
    • Functional organization of the S. cerevisiae phosphorylation network
    • Fiedler,D. et al. (2009) Functional organization of the S. cerevisiae phosphorylation network. Cell, 136, 952.
    • (2009) Cell , vol.136 , pp. 952
    • Fiedler, D.1
  • 4
    • 74049087026 scopus 로고    scopus 로고
    • Community detection in graphs
    • Fortunato,S. (2010) Community detection in graphs. Phys. Rep., 486, 75.
    • (2010) Phys. Rep. , vol.486 , pp. 75
    • Fortunato, S.1
  • 5
    • 0033518234 scopus 로고    scopus 로고
    • From molecular to modular cell biology
    • Hartwell,L.H. et al. (1999) From molecular to modular cell biology. Nature, 402, C47.
    • (1999) Nature , vol.402
    • Hartwell, L.H.1
  • 6
    • 0032741455 scopus 로고    scopus 로고
    • Sequential fuzzy cluster extraction by a graph spectral method
    • Inoue,K. and Urahama,K. (1999) Sequential fuzzy cluster extraction by a graph spectral method. Pattern Recogn Lett., 20, 699.
    • (1999) Pattern Recogn Lett. , vol.20 , pp. 699
    • Inoue, K.1    Urahama, K.2
  • 7
    • 42749103268 scopus 로고    scopus 로고
    • Topological generalizations of network motifs
    • Kashtan,N. et al. (2004) Topological generalizations of network motifs. Phys. Rev. E, 70, 031909.
    • (2004) Phys. Rev. E , vol.70 , pp. 031909
    • Kashtan, N.1
  • 8
    • 9444239213 scopus 로고    scopus 로고
    • A probabilistic functional network of yeast genes
    • Lee,I. et al. (2004) A probabilistic functional network of yeast genes. Science, 306, 1555.
    • (2004) Science , vol.306 , pp. 1555
    • Lee, I.1
  • 9
    • 0242490780 scopus 로고    scopus 로고
    • Cytoscape: a software environment for integrated models of biomolecular interaction networks
    • Shannon,P. et al. (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res., 13, 2498.
    • (2003) Genome Res. , vol.13 , pp. 2498
    • Shannon, P.1
  • 10
    • 0036578795 scopus 로고    scopus 로고
    • Network motifs in the transcriptional regulation network of escheria coli
    • Shen-Orr,S.S. et al. (2002) Network motifs in the transcriptional regulation network of escheria coli. Nat. Genet., 31, 64.
    • (2002) Nat. Genet. , vol.31 , pp. 64
    • Shen-Orr, S.S.1
  • 11
    • 1542357674 scopus 로고    scopus 로고
    • Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data
    • Tanay,A. et al. (2004) Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data. Proc. Natl Acad. Sci. USA, 101, 2981.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 2981
    • Tanay, A.1
  • 12
    • 1942469444 scopus 로고    scopus 로고
    • Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction
    • Yeger-Lotem,E. et al. (2004) Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction. Proc. Natl Acad. Sci. USA, 101, 5934.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 5934
    • Yeger-Lotem, E.1
  • 13
    • 33747379012 scopus 로고    scopus 로고
    • Design principles of molecular networks revealed by global comparisons and composite motifs
    • Yu,H. et al. (2006) Design principles of molecular networks revealed by global comparisons and composite motifs. Genome Biol., 7, R55.
    • (2006) Genome Biol. , vol.7
    • Yu, H.1
  • 14
    • 33847051248 scopus 로고    scopus 로고
    • Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiae interaction network
    • Zhang,L.V. et al. (2005) Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiae interaction network. J. Biol., 4,6.
    • (2005) J. Biol. , vol.4 , pp. 6
    • Zhang, L.V.1
  • 15
    • 34247623628 scopus 로고    scopus 로고
    • Getting connected: analysis and principles of biological networks
    • Zhu,X. et al. (2007) Getting connected: analysis and principles of biological networks. Genes Dev., 21, 1010.
    • (2007) Genes Dev. , vol.21 , pp. 1010
    • Zhu, X.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.