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Volumn 18, Issue 4, 2011, Pages 535-545

MADMX: A strategy for maximal dense motif extraction

Author keywords

algorithms; motifs extraction

Indexed keywords

ALGORITHM; ARTICLE; BIOLOGY; METHODOLOGY; SEQUENCE ANALYSIS;

EID: 79957533186     PISSN: 10665277     EISSN: None     Source Type: Journal    
DOI: 10.1089/cmb.2010.0177     Document Type: Article
Times cited : (17)

References (17)
  • 1
    • 0001882616 scopus 로고
    • Fast algorithms for mining association rules
    • Agrawal, R., and Srikant, R. 1994. Fast algorithms for mining association rules. Proc. 20th VLDB 487-499.
    • (1994) Proc. 20th VLDB , pp. 487-499
    • Agrawal, R.1    Srikant, R.2
  • 2
    • 78149283787 scopus 로고    scopus 로고
    • VARUN: Discovering extensible motifs under saturation constraints
    • Apostolico, A., Comin, M., and Parida, L. 2009. VARUN: discovering extensible motifs under saturation constraints. IEEE Trans. Comput. Biol. Bioinform. http://doi.ieeecomputersociety.org/10.1109/TCBB.2008.123.
    • (2009) IEEE Trans. Comput. Biol. Bioinform.
    • Apostolico, A.1    Comin, M.2    Parida, L.3
  • 3
    • 1842503722 scopus 로고    scopus 로고
    • Incremental paradigms of motif discovery
    • DOI 10.1089/106652704773416867
    • Apostolico, A., and Parida, L. 2004. Incremental paradigms of motif discovery. J. Comput. Biol. 11, 15-25. (Pubitemid 38429361)
    • (2004) Journal of Computational Biology , vol.11 , Issue.1 , pp. 15-25
    • Apostolico, A.1    Parida, L.2
  • 4
    • 37249023148 scopus 로고    scopus 로고
    • Optimal offline extraction of irredundant motif bases
    • Apostolico, A., and Tagliacollo, C. 2007. Optimal offline extraction of irredundant motif bases. Lect. Notes Comput. Sci. 4598, 360-371.
    • (2007) Lect. Notes Comput. Sci. , vol.4598 , pp. 360-371
    • Apostolico, A.1    Tagliacollo, C.2
  • 6
    • 49949090523 scopus 로고    scopus 로고
    • Mining maximal flexible patterns in a sequence
    • Arimura, H., and Uno, T. 2008. Mining maximal flexible patterns in a sequence. Lect. Notes Comput. Sci. 4914, 307-317.
    • (2008) Lect. Notes Comput. Sci. , vol.4914 , pp. 307-317
    • Arimura, H.1    Uno, T.2
  • 9
    • 12844259111 scopus 로고    scopus 로고
    • Some results on flexible-pattern discovery
    • Parida, L. 2000. Some results on flexible-pattern discovery. Lect. Notes Comput. Sci. 1848, 33-45.
    • (2000) Lect. Notes Comput. Sci. , vol.1848 , pp. 33-35
    • Parida, L.1
  • 13
    • 0031684427 scopus 로고    scopus 로고
    • Combinatorial pattern discovery in biological sequences: The TEIRESIAS algorithm
    • Rigoutsos, I., and Floratos, A. 1998. Combinatorial pattern discovery in biological sequences: the TEIRESIAS algorithm. Bioinformatics 14, 55-67. (Pubitemid 28397726)
    • (1998) Bioinformatics , vol.14 , Issue.1 , pp. 55-67
    • Rigoutsos, I.1    Floratos, A.2
  • 14
    • 42449106154 scopus 로고    scopus 로고
    • Empirical comparison of ab initio repeat finding programs
    • DOI 10.1093/nar/gkn064
    • Saha, S., Bridges, S., Magbanua, Z.V., et al. 2008. Empirical comparison of ab initio repeat finding programs. Nucleic Acids Res. 36, 2284-2294. (Pubitemid 351567001)
    • (2008) Nucleic Acids Research , vol.36 , Issue.7 , pp. 2284-2294
    • Saha, S.1    Bridges, S.2    Magbanua, Z.V.3    Peterson, D.G.4
  • 16
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith, T.F., and Waterman, M.S. 1981. Identification of common molecular subsequences. J. Mol. Biol. 147, 195-197.
    • (1981) J. Mol. Biol. , vol.147 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 17
    • 38049083794 scopus 로고    scopus 로고
    • Structural analysis of gapped motifs of a string
    • Ukkonen, E. 2007. Structural analysis of gapped motifs of a string. Lect. Notes Comput. Sci. 4708, 681-690.
    • (2007) Lect. Notes Comput. Sci. , vol.4708 , pp. 681-690
    • Ukkonen, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.