Qtl.outbred: Interfacing outbred line cross data with the R/qtl mapping software

BMC Research Notes

Volumn 4, Issue , 2011, Pages

  Nelson, Ronald M ^a   Shen, Xia ^b   Carlborg, Örjan ^a,b  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^b UPPSALA UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 79957494017     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-4-154     Document Type: Article

References (6)

1. R/qtl: QTL mapping in experimental crosses. KW Broman, Bioinformatics 2003 19 889 890 10.1093/bioinformatics/btg112 12724300 (Pubitemid 36582406)
2. R: A Language and Environment for Statistical Computing. R Development Core Team, 2010
3. cnF2freq: Efficient Determination of Genotype and Haplotype Probabilities in Outbred Populations Using Markov Models. C Nettelblad S Holmgren L Crooks, Proceedings of the International Conference on Bioinformatics and Computational Biology. Las Vegas, Nevada, USA; 13-16 July 2009 Springer-Verlag 2009 307 319
4. GridQTL: a grid portal for QTL mapping of compute intensive datasets. G Seaton J Hernandez JA Grunchec I White J Allen DJ de Koning W Wei D Berry C Halley SA Knott, Proceedings of 8th World Congress on Genetics Applied to Livestock Production. 13-18 August 2006 Belo Horizonte, MG, Brasil 2006
5. An improved method for estimating chromosomal line origin in QTL analysis of crosses between outbred lines. L Crooks C Nettelblad Carlborg, G3: Genes, Genomes, Genetics
6. A simple regression method for mapping quantitative trait loci in line crosses using flanking markers. SA Knott CS Haley, Heredity 1992 69 315 324 16718932