-
1
-
-
74549224399
-
The Hydra polyp: nothing but an active stem cell community
-
Bosch Thomas C.G., Anton-Erxleben Friederike, Hemmrich Georg, Khalturin Konstantin The Hydra polyp: nothing but an active stem cell community. Dev. Growth Differ. 2010, 52:15-25.
-
(2010)
Dev. Growth Differ.
, vol.52
, pp. 15-25
-
-
Bosch, T.C.G.1
Anton-Erxleben, F.2
Hemmrich, G.3
Khalturin, K.4
-
2
-
-
31044446936
-
Planarian regeneration: its end is its beginning
-
Sánchez Alvarado Alejandro Planarian regeneration: its end is its beginning. Cell 2006, 124:241-245.
-
(2006)
Cell
, vol.124
, pp. 241-245
-
-
Sánchez Alvarado, A.1
-
3
-
-
73949102343
-
Planarian regeneration: achievements and future directions after 20years of research
-
Saló Emili, et al. Planarian regeneration: achievements and future directions after 20years of research. Int. J. Dev. Biol. 2009, 53:1317-1327.
-
(2009)
Int. J. Dev. Biol.
, vol.53
, pp. 1317-1327
-
-
Saló, E.1
-
4
-
-
0036255131
-
Not your father's planarian: a classic model enters the era of functional genomics
-
Newmark Phillip A., Sánchez Alvarado Alejandro Not your father's planarian: a classic model enters the era of functional genomics. Nat. Rev. Genet. 2002, 3:210-219.
-
(2002)
Nat. Rev. Genet.
, vol.3
, pp. 210-219
-
-
Newmark, P.A.1
Sánchez Alvarado, A.2
-
5
-
-
77950503515
-
Smed-SmB, a member of the LSm protein superfamily, is essential for chromatoid body organization and planarian stem cell proliferation
-
Fernandéz-Taboada Enrique, et al. Smed-SmB, a member of the LSm protein superfamily, is essential for chromatoid body organization and planarian stem cell proliferation. Development 2010, 137:1055-1065.
-
(2010)
Development
, vol.137
, pp. 1055-1065
-
-
Fernandéz-Taboada, E.1
-
6
-
-
38349150677
-
Smed-bcatenin-1 is required for anteroposterior blastema polarity in planarian regeneration
-
Petersen Christian P., Reddien Peter W. Smed-bcatenin-1 is required for anteroposterior blastema polarity in planarian regeneration. Science 2008, 319:327-330.
-
(2008)
Science
, vol.319
, pp. 327-330
-
-
Petersen, C.P.1
Reddien, P.W.2
-
7
-
-
43049139880
-
Silencing of Smed-βcatenin1 generates radial-like hypercephalized planarians
-
Iglesias Marta, Gomez-Skarmeta Jose Luis, Saló Emili, Teresa Adell Silencing of Smed-βcatenin1 generates radial-like hypercephalized planarians. Development 2008, 135:1215-1221.
-
(2008)
Development
, vol.135
, pp. 1215-1221
-
-
Iglesias, M.1
Gomez-Skarmeta, J.L.2
Saló, E.3
Teresa, A.4
-
8
-
-
37749031255
-
Next-generation sequencing transforms today's biology
-
Schuster Stephan C. Next-generation sequencing transforms today's biology. Nat. Methods 2008, 5:16-18.
-
(2008)
Nat. Methods
, vol.5
, pp. 16-18
-
-
Schuster, S.C.1
-
9
-
-
67349209853
-
Next-generation DNA sequencing techniques
-
Ansorge Wilhelm J. Next-generation DNA sequencing techniques. New Biotechnol. 2009, 25:195-203.
-
(2009)
New Biotechnol.
, vol.25
, pp. 195-203
-
-
Ansorge, W.J.1
-
10
-
-
46249103973
-
Stem cell transcriptome profiling via massive-scale mRNA sequencing
-
Cloonan Nicole, et al. Stem cell transcriptome profiling via massive-scale mRNA sequencing. Nat. Methods 2008, 5:613-619.
-
(2008)
Nat. Methods
, vol.5
, pp. 613-619
-
-
Cloonan, N.1
-
11
-
-
74949084336
-
Genome-wide mapping of alternative splicing in Arabidopsis thaliana
-
Filichkin Sergei A., et al. Genome-wide mapping of alternative splicing in Arabidopsis thaliana. Genome Res. 2010, 20:45-58.
-
(2010)
Genome Res.
, vol.20
, pp. 45-58
-
-
Filichkin, S.A.1
-
12
-
-
46249106990
-
Mapping and quantifying mammalian transcriptomes by RNA-Seq
-
Mortazavi Ali, Williams Brian A., McCue Kenneth, Schaeffer Lorian, Wold Barbara Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat. Methods 2008, 5:621-628.
-
(2008)
Nat. Methods
, vol.5
, pp. 621-628
-
-
Mortazavi, A.1
Williams, B.A.2
McCue, K.3
Schaeffer, L.4
Wold, B.5
-
13
-
-
56749098074
-
Deep surveying of alternative splicing complexity in the human transcriptome by high throughput sequencing
-
Pan Qun, Shai Ofer, Lee Leo J., Frey Brendan J., Blencowe Benjamin J. Deep surveying of alternative splicing complexity in the human transcriptome by high throughput sequencing. Nat. Genet. 2008, 40:1413-1415.
-
(2008)
Nat. Genet.
, vol.40
, pp. 1413-1415
-
-
Pan, Q.1
Shai, O.2
Lee, L.J.3
Frey, B.J.4
Blencowe, B.J.5
-
14
-
-
42749087226
-
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
-
Lister Ryan, et al. Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell 2008, 133:523-536.
-
(2008)
Cell
, vol.133
, pp. 523-536
-
-
Lister, R.1
-
15
-
-
45549088326
-
The transcriptional landscape of the yeast genome defined by RNA sequencing
-
Nagalakshmi Ugrappa, et al. The transcriptional landscape of the yeast genome defined by RNA sequencing. Science 2008, 320:1344-1349.
-
(2008)
Science
, vol.320
, pp. 1344-1349
-
-
Nagalakshmi, U.1
-
16
-
-
47649124124
-
A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
-
Sultan Marc, et al. A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. Science 2008, 321:956-960.
-
(2008)
Science
, vol.321
, pp. 956-960
-
-
Sultan, M.1
-
17
-
-
46249096804
-
Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
-
Wilhelm Brian T., et al. Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution. Nature 2008, 453:1239-1243.
-
(2008)
Nature
, vol.453
, pp. 1239-1243
-
-
Wilhelm, B.T.1
-
18
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
Wang Eric T., et al. Alternative isoform regulation in human tissue transcriptomes. Nature 2008, 456:470-476.
-
(2008)
Nature
, vol.456
, pp. 470-476
-
-
Wang, E.T.1
-
19
-
-
75649124547
-
De novo assembly of human genomes with massively parallel short read sequencing
-
Li Ruiqiang, et al. De novo assembly of human genomes with massively parallel short read sequencing. Genome Res. 2010, 20:265-272.
-
(2010)
Genome Res.
, vol.20
, pp. 265-272
-
-
Li, R.1
-
20
-
-
0345863935
-
The KEGG resource for deciphering the genome
-
Kanehisa Minoru, Goto Susumu, Kawashima Shuichi, Okuno Yasushi, Hattori Masahiro The KEGG resource for deciphering the genome. Nucleic Acids Res. 2004, 32(suppl 1):D277-280.
-
(2004)
Nucleic Acids Res.
, vol.32
, Issue.SUPPL. 1
-
-
Kanehisa, M.1
Goto, S.2
Kawashima, S.3
Okuno, Y.4
Hattori, M.5
-
21
-
-
73649143160
-
A planarian p53 homolog regulates proliferation and self-renewal in adult stem cell lineages
-
Pearson Bret J., Sánchez Alvarado Alejandro A planarian p53 homolog regulates proliferation and self-renewal in adult stem cell lineages. Development 2010, 137:213-221.
-
(2010)
Development
, vol.137
, pp. 213-221
-
-
Pearson, B.J.1
Sánchez Alvarado, A.2
-
22
-
-
70449717378
-
Homology-based annotation of non-coding RNAs in the genomes of Schistosoma mansoni and Schistosoma japonicum
-
Copeland Claudia S., et al. Homology-based annotation of non-coding RNAs in the genomes of Schistosoma mansoni and Schistosoma japonicum. BMC Genomics 2009, 10:464-476.
-
(2009)
BMC Genomics
, vol.10
, pp. 464-476
-
-
Copeland, C.S.1
-
23
-
-
73549084272
-
Cell death and tissue remodeling in planarian regeneration
-
Pellettieri Jason, et al. Cell death and tissue remodeling in planarian regeneration. Dev. Biol. 2010, 338:76-85.
-
(2010)
Dev. Biol.
, vol.338
, pp. 76-85
-
-
Pellettieri, J.1
-
24
-
-
70350327764
-
FGFRL1 is a neglected putative actor of the FGF signaling pathway present in all major metazoan phyla
-
Bertrand Stephanie, Somorjai Ildiko, Garcia-Fernandez Jordi, Lamonerie Thomas, Escriva Hector FGFRL1 is a neglected putative actor of the FGF signaling pathway present in all major metazoan phyla. BMC Evol. Biol. 2009, 9:226-239.
-
(2009)
BMC Evol. Biol.
, vol.9
, pp. 226-239
-
-
Bertrand, S.1
Somorjai, I.2
Garcia-Fernandez, J.3
Lamonerie, T.4
Escriva, H.5
-
25
-
-
64249153813
-
Planarian PTEN homologs regulate stem cells and regeneration through TOR signaling
-
Oviedo Néstor J., Pearson Bret J., Levin Michael, Sánchez Alvarado Alejandro Planarian PTEN homologs regulate stem cells and regeneration through TOR signaling. Dis. Model Mech. 2008, 1:131-143.
-
(2008)
Dis. Model Mech.
, vol.1
, pp. 131-143
-
-
Oviedo, N.J.1
Pearson, B.J.2
Levin, M.3
Sánchez Alvarado, A.4
-
26
-
-
58749091076
-
Two msh/msx-related genes, Djmsh1 and Djmsh2, contribute to the early blastema growth during planarian head regeneration
-
Mannini Linda, et al. Two msh/msx-related genes, Djmsh1 and Djmsh2, contribute to the early blastema growth during planarian head regeneration. Int. J. Dev. Biol. 2008, 52:943-952.
-
(2008)
Int. J. Dev. Biol.
, vol.52
, pp. 943-952
-
-
Mannini, L.1
-
27
-
-
0033956060
-
The COG database: a tool for genome-scale analysis of protein functions and evolution
-
Tatusov Roman L., Galperin Michael Y., Natale Darren A., Koonin Eugene V. The COG database: a tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res. 2000, 28:33-36.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 33-36
-
-
Tatusov, R.L.1
Galperin, M.Y.2
Natale, D.A.3
Koonin, E.V.4
-
28
-
-
33747846582
-
WEGO: a web tool for plotting GO annotations
-
Ye Jia, Fang Lin, et al. WEGO: a web tool for plotting GO annotations. Nucleic Acids Res. 2006, 34(suppl 2):W293-W297.
-
(2006)
Nucleic Acids Res.
, vol.34
, Issue.SUPPL. 2
-
-
Ye, J.1
Fang, L.2
-
29
-
-
0033290515
-
ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences
-
Iseli Christian, Jongeneel C.Victor, Bucher Philipp ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences. Proc. Int. Conf. Intell. Syst. Mol. Biol. 1999, 138-148.
-
(1999)
Proc. Int. Conf. Intell. Syst. Mol. Biol.
, pp. 138-148
-
-
Iseli, C.1
Jongeneel, C.V.2
Bucher, P.3
-
30
-
-
33747844624
-
BLAST: improvements for better sequence analysis
-
Ye Jian, McGinnis Scott, Madden Thomas L. BLAST: improvements for better sequence analysis. Nucleic Acids Res. 2006, 34(suppl 2):W6-W9.
-
(2006)
Nucleic Acids Res.
, vol.34
, Issue.SUPPL. 2
-
-
Ye, J.1
McGinnis, S.2
Madden, T.L.3
-
31
-
-
38549143656
-
SmedGD: the Schmidtea mediterranea genome database
-
Robb Sofia M.C., Ross Eric, Alejandro Sánchez Alvarado SmedGD: the Schmidtea mediterranea genome database. Nucleic Acids Res. 2008, 36(suppl 1):D599-D606.
-
(2008)
Nucleic Acids Res.
, vol.36
, Issue.SUPPL. 1
-
-
Robb, S.M.C.1
Ross, E.2
Alejandro Sánchez, A.3
-
32
-
-
0030681260
-
The significance of digital gene expression profiles
-
Audic Stéphane, Claverie1 Jean-Michel The significance of digital gene expression profiles. Genome Res. 1997, 7:986-995.
-
(1997)
Genome Res.
, vol.7
, pp. 986-995
-
-
Audic, S.1
Claverie1, J.-M.2
-
33
-
-
18844438309
-
DjPum, a homologue of Drosophila Pumilio, is essential to planarian stem cell maintenance
-
Salvetti Alessandra, et al. DjPum, a homologue of Drosophila Pumilio, is essential to planarian stem cell maintenance. Development 2005, 132:1863-1874.
-
(2005)
Development
, vol.132
, pp. 1863-1874
-
-
Salvetti, A.1
-
34
-
-
34848866878
-
Smedinx-11 is a planarian stem cell gap junction gene required for regeneration and homeostasis
-
Oviedo Néstor J., Levin Michael smedinx-11 is a planarian stem cell gap junction gene required for regeneration and homeostasis. Development 2007, 134:3121-3131.
-
(2007)
Development
, vol.134
, pp. 3121-3131
-
-
Oviedo, N.J.1
Levin, M.2
-
35
-
-
37249048471
-
BMP signaling regulates the dorsal planarian midline and is needed for asymmetric regeneration
-
Reddien Peter W., Bermange Adam L., Kicza Adrienne M., Sánchez Alvarado Alejandro BMP signaling regulates the dorsal planarian midline and is needed for asymmetric regeneration. Development 2007, 134:4043-4051.
-
(2007)
Development
, vol.134
, pp. 4043-4051
-
-
Reddien, P.W.1
Bermange, A.L.2
Kicza, A.M.3
Sánchez Alvarado, A.4
-
36
-
-
28144464878
-
SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells
-
Reddien Peter W., Oviedo Néstor J., Jennings Joya R., Jenkin James C., Sánchez Alvarado Alejandro SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells. Science 2005, 310:1327-1330.
-
(2005)
Science
, vol.310
, pp. 1327-1330
-
-
Reddien, P.W.1
Oviedo, N.J.2
Jennings, J.R.3
Jenkin, J.C.4
Sánchez Alvarado, A.5
-
37
-
-
51049089115
-
Molecular analysis of stem cells and their descendents during cell turnover and regeneration in the planarian Schmidtea mediterranea
-
Eisenhoffer George T., Kang Hara, Sánchez Alvarado Alejandro Molecular analysis of stem cells and their descendents during cell turnover and regeneration in the planarian Schmidtea mediterranea. Cell Stem Cell 2008, 3:327-339.
-
(2008)
Cell Stem Cell
, vol.3
, pp. 327-339
-
-
Eisenhoffer, G.T.1
Kang, H.2
Sánchez Alvarado, A.3
-
38
-
-
24944490097
-
Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture
-
Cebrià Francesc, Newmark Phillip A. Planarian homologs of netrin and netrin receptor are required for proper regeneration of the central nervous system and the maintenance of nervous system architecture. Development 2005, 132:3691-3703.
-
(2005)
Development
, vol.132
, pp. 3691-3703
-
-
Cebrià, F.1
Newmark, P.A.2
-
39
-
-
34249020273
-
Clathrin-mediated endocytic signals are required for the regeneration of, as well as homeostasis in, the planarian CNS
-
Inoue Takeshi, Hayashi Tetsutaro, Takechi Katsuaki, Agata Kiyokazu Clathrin-mediated endocytic signals are required for the regeneration of, as well as homeostasis in, the planarian CNS. Development 2007, 134:1679-1689.
-
(2007)
Development
, vol.134
, pp. 1679-1689
-
-
Inoue, T.1
Hayashi, T.2
Takechi, K.3
Agata, K.4
-
40
-
-
34248579919
-
Morphogenesis defects are associated with abnormal nervous system regeneration following roboA RNAi in planarians
-
Cebrià Francesc, Newmark Phillip A. Morphogenesis defects are associated with abnormal nervous system regeneration following roboA RNAi in planarians. Development 2007, 134:833-837.
-
(2007)
Development
, vol.134
, pp. 833-837
-
-
Cebrià, F.1
Newmark, P.A.2
-
41
-
-
36549079669
-
Regeneration of retinotectal projections after optic tectum removal in adult newts
-
Okamoto Mitsumasa, Ohsawa Hatsuki, Hayashi Toshinori, Owaribe Katsushi, Tsonis Panagiotis A. Regeneration of retinotectal projections after optic tectum removal in adult newts. Mol. Vis. 2007, 13:2112-2118.
-
(2007)
Mol. Vis.
, vol.13
, pp. 2112-2118
-
-
Okamoto, M.1
Ohsawa, H.2
Hayashi, T.3
Owaribe, K.4
Tsonis, P.A.5
-
42
-
-
66349099011
-
Expression of stem cell pluripotency factors during regeneration in newts
-
Maki Nobuyasu, et al. Expression of stem cell pluripotency factors during regeneration in newts. Dev. Dyn. 2009, 238:1613-1616.
-
(2009)
Dev. Dyn.
, vol.238
, pp. 1613-1616
-
-
Maki, N.1
-
43
-
-
77949321838
-
Expression profiles during dedifferentiation in newt lens regeneration revealed by expressed sequence tags
-
Maki Nobuyasu, et al. Expression profiles during dedifferentiation in newt lens regeneration revealed by expressed sequence tags. Mol. Vis. 2010, 16:72-78.
-
(2010)
Mol. Vis.
, vol.16
, pp. 72-78
-
-
Maki, N.1
-
45
-
-
0037020041
-
Asymmetries in H+/K+-ATPase and cell membrane potentials comprise a very early step in left-right patterning
-
Levin Michael, Thorlin Thorleif, Robinson Kenneth R., Nogi Taisaku, Mercola Mark Asymmetries in H+/K+-ATPase and cell membrane potentials comprise a very early step in left-right patterning. Cell 2002, 111:77-89.
-
(2002)
Cell
, vol.111
, pp. 77-89
-
-
Levin, M.1
Thorlin, T.2
Robinson, K.R.3
Nogi, T.4
Mercola, M.5
-
46
-
-
34248195467
-
H+pump-dependent changes in membrane voltage are an early mechanism necessary and sufficient to induce Xenopus tail regeneration
-
Adams Dany S., Masi Alessio, Levin Michael H+pump-dependent changes in membrane voltage are an early mechanism necessary and sufficient to induce Xenopus tail regeneration. Development 2007, 134:1323-1335.
-
(2007)
Development
, vol.134
, pp. 1323-1335
-
-
Adams, D.S.1
Masi, A.2
Levin, M.3
-
47
-
-
77949847250
-
Apoptotic cells activate the "phoenix rising" pathway to promote wound healing and tissue regeneration
-
Fang Li, et al. Apoptotic cells activate the "phoenix rising" pathway to promote wound healing and tissue regeneration. Sci. Signal. 2010, 3:ra13.
-
(2010)
Sci. Signal.
, vol.3
-
-
Fang, L.1
-
48
-
-
36048973810
-
The spark of life: electricity and regeneration
-
Slack Jonathan M.W. The spark of life: electricity and regeneration. Sci. STKE 2007, 405:pe54.
-
(2007)
Sci. STKE
, vol.405
-
-
Slack, J.M.W.1
-
49
-
-
67649429784
-
Bioelectric mechanisms in regeneration: unique aspects and future perspectives
-
Levin Michael Bioelectric mechanisms in regeneration: unique aspects and future perspectives. Semin. Cell Dev. Biol. 2009, 20:543-556.
-
(2009)
Semin. Cell Dev. Biol.
, vol.20
, pp. 543-556
-
-
Levin, M.1
-
50
-
-
62149148156
-
Genetic interaction of PGE2 and Wnt signaling regulates developmental specification of stem cells and regeneration
-
Goessling Wolfram, et al. Genetic interaction of PGE2 and Wnt signaling regulates developmental specification of stem cells and regeneration. Cell 2009, 136:1136-1147.
-
(2009)
Cell
, vol.136
, pp. 1136-1147
-
-
Goessling, W.1
|