Host dependent evolutionary patterns and the origin of 2009 H1N1 pandemic influenza

PLoS Currents

Volumn , Issue JAN, 2010, Pages

  Solovyov, Alexander ^a   Greenbaum, Benjamin ^b   Palacios, Gustavo ^c   Lipkin, W Ian ^a   Rabadan, Raul ^a  

^a Och Spine at New York Presbyterian Hospitals   (United States)

^b INSTITUTE FOR ADVANCED STUDY   (United States)

^c NONE

Author keywords

[No Author keywords available]

Indexed keywords

EID: 79956316478     PISSN: None     EISSN: 21573999     Source Type: Journal    
DOI: 10.1371/currents.RRN1147     Document Type: Article

References (12)

1. Holmes, EC (2010) The comparitive genomics of viral emergence. PNAS 2010 107:1742-1746.
2. Rambaut A and Holmes EC (2009) The early molecular epidemiology of the swine-origin A/H1N1 human influenza pandemic. PLoS Curr Influenza RRN1003.
3. Trifonov V, Khiabanian H, Rabadan R (2009) Geographic dependence, surveillance, and origins of the 2009 influenza A (H1N1) virus. New England J Med 361:115-119.
4. Trifonov V, Khiabanian H, Greenbaum B, Rabadan R. The origin of the recent swine influenza A(H1N1) virus infecting humans. Eurosurveillance 14: 19193.
5. Smith GJD, Vijaykrishna D, Bahl J, Lycett SJ, Worobey M, Pybus OG, Ma SK, Cheung CL, Raghwani J, Bhatt S, et al. (2009) Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic. Nature 459:1122-5.
6. Solovyov A, Palacios G, Briese T, Lipkin WI, Rabadan R (2009) Cluster analysis of the origins of the new influenza A (H1N1) virus. Eurosurveillance 14:1-55.
7. Gibbs AJ, Armstrong JS and Downie J (2007) From where did the 2009 'swine-origin' influenza A virus (H1N1) emerge? Virol J 6:207.
8. Lu J, Liu D, Liu W, Shi T, Tong Y, Cao W (2009) Genetic stability and linkage analysis of the 2009 influenza A(H1N1) virus based on sequence homology. Arch Virol 154: 1883-1890.
9. Rabadan R, Levine AJ, and Robins H (2006) Comparison of avian and human influenza A viruses reveals a mutational Bias on the viral genomes. J Virol 80:11887-11891.
10. Greenbaum BD, Levine AJ, Bhanot G, Rabadan R (2008) Patterns of evolution and host gene mimicry in influenza and other RNA viruses. PLoS Pathog 4:e1000079.
11. Palese P (2004) Influenza: old and new threats. Nat Med 10: S82-87.
12. Felsenstein J (2009) PHYLIP (Phylogeny Inference Package) version 3.69. Department of Genome Sciences, University of Washington, Seattle.