-
1
-
-
0026321830
-
Bacteriophage adsorption during transport through porous media: Chemical perturbations and reversibility
-
Bales RC, Hinkle SR, Kroeger TW, Stocking K, Gerba CP (1991) Bacteriophage adsorption during transport through porous media: chemical perturbations and reversibility. Environ Sci Technol 25:2088-2095
-
(1991)
Environ Sci Technol
, vol.25
, pp. 2088-2095
-
-
Bales, R.C.1
Hinkle, S.R.2
Kroeger, T.W.3
Stocking, K.4
Gerba, C.P.5
-
2
-
-
0342973218
-
Subsurface viruses and bacteria in holocene/late pleistocene sediments of saanich inlet, BC: ODP holes 1033B and 1034B, Leg 169S
-
DOI 10.1016/S0025-3227(00)00152-3, PII S0025322700001523
-
Bird DF, Juniper SK, Ricciardi-Rigault M, Martineu P, Prairie YT, Calvert SE (2001) Subsurface viruses and bacteria in Holocene/Late Pleistocene sediments of Saanich Inlet, BC: ODP holes 1033B and 1043B, Leg 169S. Mar Geol 174: 227-239 (Pubitemid 32442653)
-
(2001)
Marine Geology
, vol.174
, Issue.1-4
, pp. 227-239
-
-
Bird, D.F.1
Juniper, S.K.2
Ricciardi-Rigault, M.3
Martineu, P.4
Prairie, Y.T.5
Calvert, S.E.6
-
3
-
-
1642363900
-
Diversity and population structure of a near-shore marine-sediment viral community
-
DOI 10.1098/rspb.2003.2628
-
BreitbartM, Felts B, Kelley S, Mahaffy J, Nulton J, Salamon P, Rohwer F (2004) Diversity and population structure of a nearshore marine sediment viral community. Proc R Soc Lond Ser B Biol Sci 271:565-574 (Pubitemid 38365844)
-
(2004)
Proceedings of the Royal Society B: Biological Sciences
, vol.271
, Issue.1539
, pp. 565-574
-
-
Breitbart, M.1
Felts, B.2
Kelley, S.3
Mahaffy, J.M.4
Nulton, J.5
Salamon, P.6
Rohwer, F.7
-
4
-
-
0002910974
-
Sediment analysis
-
Holme NA, McIntyre AD (eds), 2nd edn. Blackwell Scientific, Oxford
-
Buchanan JB (1984) Sediment analysis. In: Holme NA, McIntyre AD (eds) Methods for the study of marine benthos, 2nd edn. Blackwell Scientific, Oxford, p 41-64
-
(1984)
Methods for the Study of Marine Benthos
, pp. 41-64
-
-
Buchanan, J.B.1
-
5
-
-
0035143656
-
Application of digital image analysis and flow cytometry to enumerate marine viruses stained with SYBR Gold
-
DOI 10.1128/AEM.67.2.539-545.2001
-
Chen F, Lu JR, Binder BJ, Liu YC, Hodson RE (2001) Application of digital image analysis and flow cytometry to enumerate marine viruses stained with SYBR Gold. Appl Environ Microbiol 67:539-545 (Pubitemid 32121339)
-
(2001)
Applied and Environmental Microbiology
, vol.67
, Issue.2
, pp. 539-545
-
-
Chen, F.1
Lu, J.-R.2
Binder, B.J.3
Liu, Y.-C.4
Hodson, R.E.5
-
6
-
-
79956320969
-
Separation of free virus particles from sediments in aquatic systems
-
Wilhelm SW, Weinbauer MG, Suttle CA (eds). ASLO, Waco, TX,available at
-
Danovaro R, MiddelboeM(2010) Separation of free virus particles from sediments in aquatic systems. In: Wilhelm SW, Weinbauer MG, Suttle CA (eds) Manual of Aquatic Viral Ecology. ASLO, Waco, TX, p 74-81, available at www. aslo.org/boots/mave
-
(2010)
Manual of Aquatic Viral Ecology
, pp. 74-81
-
-
Danovaro, R.1
Middelboe, M.2
-
7
-
-
43549111571
-
Viriobenthos in freshwater and marine sediments: A review
-
DOI 10.1111/j.1365-2427.2008.01961.x
-
Danovaro R, Corinaldesi C, Filippini M, Fischer UR and others (2008) Viriobenthos in freshwater and marine sediments: a review. Freshw Biol 53:1186-1213 (Pubitemid 351677371)
-
(2008)
Freshwater Biology
, vol.53
, Issue.6
, pp. 1186-1213
-
-
Danovaro, R.1
Corinaldesi, C.2
Filippini, M.3
Fischer, U.R.4
Gessner, M.O.5
Jacquet, S.6
Magagnini, M.7
Velimirov, B.8
-
8
-
-
57049085695
-
Factors influencing benthic bacterial abundance, biomass, and activity on the northern continental margin and deep basin of the Gulf of Mexico
-
Deming JW, Carpenter SD (2008) Factors influencing benthic bacterial abundance, biomass, and activity on the northern continental margin and deep basin of the Gulf of Mexico.Deep-Sea Res II 55:2597-2606
-
(2008)
Deep-Sea Res II
, vol.55
, pp. 2597-2606
-
-
Deming, J.W.1
Carpenter, S.D.2
-
10
-
-
84856592754
-
-
Expedition 307 Scientists, Site U1317, Integrated Ocean Drilling Program Management International, Washington, DC. Available at, Ferdelman TG, Kano A, Williams T, Henriet JP
-
Expedition 307 Scientists (2006) Site U1317. In: Ferdelman TG, Kano A, Williams T, Henriet JP, and the Expedition 307 Scientists (eds) Proc Integ Ocean Drilling Prog 307. Integrated Ocean Drilling Program Management International, Washington, DC. Available at http://publications. iodp.org/proceedings/307/104/ 104-.htmdoi:10.2204/iodp.proc.307.104.2006
-
(2006)
Proc Integ Ocean Drilling Prog 307
-
-
-
11
-
-
34249299436
-
Viral abundance and genome size distribution in the sediment and water column of marine and freshwater ecosystems
-
DOI 10.1111/j.1574-6941.2007.00298.x
-
Filippini M, Middelboe M (2007) Viral abundance and genome size distribution in the sediment and water column of marine and freshwater ecosystems. FEMS Microbiol Ecol 60:397-410 (Pubitemid 46805014)
-
(2007)
FEMS Microbiology Ecology
, vol.60
, Issue.3
, pp. 397-410
-
-
Filippini, M.1
Middelboe, M.2
-
12
-
-
0141816842
-
Does virus-induced lysis contribute significantly to bacterial mortality in the oxygenated sediment layer of shallow oxbow lakes?
-
DOI 10.1128/AEM.69.9.5281-5289.2003
-
Fischer UR, Wieltschnig C, Kirschner AKT, Velimirov B (2003) Does virus-induced lysis contribute significantly to bacterial mortality in the oxygenated sediment layer of shallow oxbow lakes? Appl Environ Microbiol 69:5281-5289 (Pubitemid 37150752)
-
(2003)
Applied and Environmental Microbiology
, vol.69
, Issue.9
, pp. 5281-5289
-
-
Fischer, U.R.1
Wieltschnig, C.2
Kirschner, A.K.T.3
Velimirov, B.4
-
13
-
-
8744249248
-
Benthic and pelagic viral decay experiments: A model-based analysis and its applicability
-
DOI 10.1128/AEM.70.11.6706-6713.2004
-
Fischer UR, Weisz W, Wieltschnig C, Kirschner KT, Vlimirov B (2004) Benthic and pelagic viral decay experiments: a model-based analysis and its applicability. Appl Environ Microbiol 70:6706-6713 (Pubitemid 39518582)
-
(2004)
Applied and Environmental Microbiology
, vol.70
, Issue.11
, pp. 6706-6713
-
-
Fischer, U.R.1
Weisz, W.2
Wieltschnig, C.3
Kirschner, A.K.T.4
Velimirov, B.5
-
14
-
-
27844601557
-
Optimization of extraction and estimation of viruses in silty freshwater sediments
-
Fischer UR, Kirschner AKT, Velimirov B (2005) Optimization of extraction and estimation of viruses in silty freshwater sediments. Aquat Microb Ecol 40:207-216 (Pubitemid 41652963)
-
(2005)
Aquatic Microbial Ecology
, vol.40
, Issue.3
, pp. 207-216
-
-
Fischer, U.R.1
Kirschner, A.K.T.2
Velimirov, B.3
-
15
-
-
53949101331
-
Prokaryotic biodiversity and activity in the deep subseafloor biosphere
-
Fry JC, Parkes J, Cragg BA, Weightman AJ, Webster G (2008) Prokaryotic biodiversity and activity in the deep subseafloor biosphere. FEMS Microbiol Ecol 66:181-196
-
(2008)
FEMS Microbiol Ecol
, vol.66
, pp. 181-196
-
-
Fry, J.C.1
Parkes, J.2
Cragg, B.A.3
Weightman, A.J.4
Webster, G.5
-
17
-
-
9244249222
-
Virus and bacteria dynamics of a coastal sediment: Implication for benthic carbon cycling
-
Glud RN, MiddelboeM(2004) Virus and bacteria dynamics of a coastal sediment: implication for benthic carbon cycling. Limnol Oceanogr 49:2073-2081. (Pubitemid 39547882)
-
(2004)
Limnology and Oceanography
, vol.49
, Issue.6
, pp. 2073-2081
-
-
Glud, R.N.1
Middelboe, M.2
-
18
-
-
0034623902
-
Anoxic incubation of sediment in gas-tight plastic bags: A method for biogeochemical process studies
-
Hansen JW, Thamdrup B, Jørgensen BB (2000) Anoxic incubation of sediment in gas-tight plastic bags: a method for biogeochemical process studies. Mar Ecol Prog Ser 208:273-282. (Pubitemid 32111167)
-
(2000)
Marine Ecology Progress Series
, vol.208
, pp. 273-282
-
-
Hansen, J.W.1
Thamdrup, B.2
Jorgensen, B.B.3
-
19
-
-
72149107856
-
Sediment dynamics and palaeo-environmental context at key stages in the Challenger cold-water mound formation: Clues from sediment deposits at the mound base
-
Huvenne VAI, Rooij DV, De Mol B, Thierens M, O'Donnell R, Foubert A (2009) Sediment dynamics and palaeo-environmental context at key stages in the Challenger cold-water mound formation: clues from sediment deposits at the mound base. Deep-Sea Res I 56:2263-2280
-
(2009)
Deep-Sea Res I
, vol.56
, pp. 2263-2280
-
-
Huvenne, V.A.I.1
Rooij, D.V.2
De Mol, B.3
Thierens, M.4
O'Donnell, R.5
Foubert, A.6
-
20
-
-
34548737680
-
Feast and famine - Microbial life in the deep-sea bed
-
DOI 10.1038/nrmicro1745, PII NRMICRO1745
-
Jørgensen BB, Boetius A (2007) Feast and famine - microbial life in the deep-sea bed. Natl Rev 5:770-781 (Pubitemid 47423765)
-
(2007)
Nature Reviews Microbiology
, vol.5
, Issue.10
, pp. 770-781
-
-
Jorgensen, B.B.1
Boetius, A.2
-
21
-
-
37449015299
-
Age constraints on the origin and growth history of a deep-water coral mound in the northeast Atlantic drilled during Integrated Ocean drilling program expedition 307
-
Kano A, Ferdelman TG, Williams T, Henriet JP and others (2007) Age constraints on the origin and growth history of a deep-water coral mound in the northeast Atlantic drilled during Integrated Ocean Drilling Program Expedition 307. Geology 35:1051-1054
-
(2007)
Geology
, vol.35
, pp. 1051-1054
-
-
Kano, A.1
Ferdelman, T.G.2
Williams, T.3
Henriet, J.P.4
-
22
-
-
0033784827
-
Bacterial growth rate and marine virushost dynamics
-
Middelboe M (2000) Bacterial growth rate and marine virushost dynamics. Microb Ecol 40:114-124
-
(2000)
Microb Ecol
, vol.40
, pp. 114-124
-
-
Middelboe, M.1
-
23
-
-
33646777447
-
Viral activity along a trophic gradient in the continental margin sediments off central Chile
-
Middelboe M, Glud RN (2006) Viral activity along a trophic gradient in the continental margin sediments off central Chile. Mar Biol Res 2:41-51
-
(2006)
Mar Biol Res
, vol.2
, pp. 41-51
-
-
Middelboe, M.1
Glud, R.N.2
-
24
-
-
0043073267
-
Distribution of viruses and bacteria in relation to diagenetic activity in an estuarine sediment
-
Middelboe M, Glud RN, Finster K (2003) Distribution of viruses and bacteria in relation to diagenetic activity in an estuarine sediment. Limnol Oceanogr 48:1447-1456 (Pubitemid 36964765)
-
(2003)
Limnology and Oceanography
, vol.48
, Issue.4
, pp. 1447-1456
-
-
Middelboe, M.1
Glud, R.N.2
Finster, K.3
-
25
-
-
30144434584
-
Spatial distribution and activity of viruses in the deep-sea sediments of Sagami Bay, Japan
-
DOI 10.1016/j.dsr.2005.09.008, PII S0967063705002359
-
Middelboe M, Glud RN, Wenzhöfer F, Oguri K, Kitazato H (2006) Spatial distribution and activity of viruses in the deep-sea sediments of Sagami Bay, Japan. Deep-Sea Res I 53:1-13 (Pubitemid 43052558)
-
(2006)
Deep-Sea Research Part I: Oceanographic Research Papers
, vol.53
, Issue.1
, pp. 1-13
-
-
Middelboe, M.1
Glud, R.N.2
Wenzhofer, F.3
Oguri, K.4
Kitazato, H.5
-
26
-
-
0014580515
-
Processes controlling virus inactivation in seawater
-
Mitchell R, Jannasch HW (1969) Processes controlling virus inactivation in seawater. Environ Sci Technol 3:941-943
-
(1969)
Environ Sci Technol
, vol.3
, pp. 941-943
-
-
Mitchell, R.1
Jannasch, H.W.2
-
27
-
-
0030620441
-
Virus decay and its causes in coastal waters
-
Noble RT, Fuhrman JA (1997) Virus decay and its causes in coastal waters. Appl Environ Microbiol 63:77-83
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 77-83
-
-
Noble, R.T.1
Fuhrman, J.A.2
-
28
-
-
0347794946
-
Recent studies on bacterial populations and processes in subseafloor sediments: A review
-
Parkes RJ, Cragg BA, Wellsbury P (2000) Recent studies on bacterial populations and processes in subseafloor sediments: a review. Hydrogeol J 8:11-28
-
(2000)
Hydrogeol J
, vol.8
, pp. 11-28
-
-
Parkes, R.J.1
Cragg, B.A.2
Wellsbury, P.3
-
29
-
-
14544290535
-
Prokaryotic cells of the deep sub-seafloor biosphere identified as living bacteria
-
DOI 10.1038/nature03302
-
Schippers A, Neretin LN, Kallmeyer J, Ferdelman TG, Cragg BA, Parkes RJ, Jørgensen BB (2005) Prokaryotic cells of the deep sub-seafloor biosphere identified as living bacteria. Nature 433:861-864 (Pubitemid 40314893)
-
(2005)
Nature
, vol.433
, Issue.7028
, pp. 861-864
-
-
Schippers, A.1
Neretin, L.N.2
Kallmeyer, J.3
Ferdelman, T.G.4
Cragg, B.A.5
Parkes, R.J.6
Jorgensen, B.B.7
-
30
-
-
45849123249
-
Viral dynamics in a coastal sediment: Seasonal pattern, controlling factors and relations to the pelagic-benthic coupling
-
DOI 10.1080/17451000801888718, PII 793823990
-
Siem-Jørgensen M, Glud RN, Middelboe M (2008) Viral dynamics in a coastal sediment: seasonal pattern, controlling factors and relations to the benthic-pelagic coupling. Mar Biol Res 4:165-179 (Pubitemid 351878512)
-
(2008)
Marine Biology Research
, vol.4
, Issue.3
, pp. 165-179
-
-
Siem-Jorgensen, M.1
Glud, R.N.2
Middelboe, M.3
-
31
-
-
0026458628
-
Mechanisms and rates of decay of marine viruses in seawater
-
Suttle CA, Chen F (1992) Mechanisms and rates of decay of marine viruses in sea water. Appl Environ Microbiol 58: 3721-3729 (Pubitemid 24406256)
-
(1992)
Applied & Environmental Microbiology
, vol.58
, Issue.11
, pp. 3721-3729
-
-
Suttle, C.A.1
Feng Chen2
-
32
-
-
0030310502
-
Pathways of carbon oxidation in continental margin sediments off central Chile
-
Thamdrup B, Canfield D (1996) Patways of carbon oxidation in continental margin sediments off central Chile. Limnol Oceanogr 41:1629-1650 (Pubitemid 126447283)
-
(1996)
Limnology and Oceanography
, vol.41
, Issue.8
, pp. 1629-1650
-
-
Thamdrup, B.1
Canfield, D.E.2
-
33
-
-
0022649626
-
Microscopic enumeration of attached marine bacteria of seawater, marine sediment, fecal matter, and kelp blade samples following pyrophosphate and ultrasound treatments
-
Velji MA, Albright LJ (1985) Microscopic analysis enumeration of marine bacteria of seawater, marine sediment, fecal matter and kelp blade samples following pyrophosphate and ultrasound treatments. Can J Microbiol 32: 121-126 (Pubitemid 16115574)
-
(1986)
Canadian Journal of Microbiology
, vol.32
, Issue.2
, pp. 121-126
-
-
Velji, M.I.1
Albright, L.J.2
-
34
-
-
58149265284
-
Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307)
-
Webster G, Blazejak A, Cragg BA, Schippers A and others (2009) Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307). Environ Microbiol 11: 239-257
-
(2009)
Environ Microbiol
, vol.11
, pp. 239-257
-
-
Webster, G.1
Blazejak, A.2
Cragg, B.A.3
Schippers, A.4
-
35
-
-
0030744644
-
Deep marine biosphere fuelled by increasing organic matter availability during burial and heating
-
DOI 10.1038/41544
-
Wellsbury P, Goodman K, Barth T, Cragg BA, Barnes SP, Parkes RJ (1997) Deep marine biosphere fuelled by increasing organic matter availability during burial and heating. Nature 388:573-576 (Pubitemid 27340004)
-
(1997)
Nature
, vol.388
, Issue.6642
, pp. 573-576
-
-
Wellsbury, P.1
Goodman, K.2
Barth, T.3
Cragg, B.A.4
Barnes, S.P.5
Parkes, R.J.6
|