Sensory rhodopsin-I as a bidirectional switch: Opposite conformational changes from the same photoisomerization

Biophysical Journal

Volumn 100, Issue 9, 2011, Pages 2178-2183

  Sasaki, Jun ^a   Takahashi, Hazuki ^b   Furutani, Yuji ^b,c   Kandori, Hideki ^b   Spudich, John L ^a  

^a UNIVERSITY OF TEXAS MEDICAL SCHOOL   (United States)

^b NAGOYA INSTITUTE OF TECHNOLOGY   (Japan)

^c INSTITUTE FOR MOLECULAR SCIENCE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 79956297602     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2011.03.026     Document Type: Article

References (30)

1. Sineshchekov, O. A., J. Sasaki,..., J. L. Spudich. 2008. A Schiff base connectivity switch in sensory rhodopsin signaling. Proc. Natl. Acad. Sci. USA. 105:16159-16164.
2. Sineshchekov, O. A., J. Sasaki,..., J. L. Spudich. 2010. Attractant and repellent signaling conformers of sensory rhodopsin-transducer complexes. Biochemistry. 49:6696-6704.
3. Sasaki, J., A. L. Tsai, and J. L. Spudich. 2011. Opposite displacement of helix F in attractant and repellent signaling by sensory rhodopsin-Htr complexes. J. Biol. Chem., In press.
4. Spudich, J. L., and R. A. Bogomolni. 1984. Mechanism of colour discrimination by a bacterial sensory rhodopsin. Nature. 312:509-513.
5. Haupts, U., J. Tittor,..., D. Oesterhelt. 1997. General concept for ion translocation by halobacterial retinal proteins: the isomerization/switch/ transfer (IST) model. Biochemistry. 36:2-7. (Pubitemid 27024671)
6. Furutani, Y., and H. Kandori. 2002. Internal water molecules of archaeal rhodopsins (Review). Mol. Membr. Biol. 19:257-265 (Review). (Pubitemid 36090786)
7. Klare, J. P., I. Chizhov, and M. Engelhard. 2008. Microbial rhodopsins: scaffolds for ion pumps, channels, and sensors. Results Probl. Cell Differ. 45:73-122.
8. Sasaki, J., and J. L. Spudich. 2008. Signal transfer in haloarchaeal sensory rhodopsin-transducer complexes. Photochem. Photobiol. 84:863-868.
9. Yan, B., K. Nakanishi, and J. L. Spudich. 1991. Mechanism of activation of sensory rhodopsin I: evidence for a steric trigger. Proc. Natl. Acad. Sci. USA. 88:9412-9416. (Pubitemid 21915641)
10. Haupts, U., W. Eisfeld,..., D. Oesterhelt. 1994. Sensory rhodopsin I photocycle intermediate SRI380 contains 13-cis retinal bound via an unprotonated Schiff base. FEBS Lett. 356:25-29.
11. Chen, X., and J. L. Spudich. 2002. Demonstration of 2:2 stoichiometry in the functional SRI-HtrI signaling complex in Halobacterium membranes by gene fusion analysis. Biochemistry. 41:3891-3896. (Pubitemid 34251028)
12. Furutani, Y., H. Takahashi,..., H. Kandori. 2008. Structural changes of sensory rhodopsin I and its transducer protein are dependent on the protonated state of Asp76. Biochemistry. 47:2875-2883. (Pubitemid 351328839)
13. Kitade, Y., Y. Furutani,..., H. Kandori. 2009. Proton release group of pharaonis phoborhodopsin revealed by ATR-FTIR spectroscopy. Biochemistry. 48:1595-1603.
14. Jung, K.-H. 1999. Protein-protein interaction between phototaxis receptor sensory rhodopsin I and its transducer HtrI. PhD thesis. University of Texas Graduate School of Biomedical Sciences, Houston, TX.
15. Jung, K.-H., and J. L. Spudich. 1996. Protonatable residues at the cytoplasmic end of transmembrane helix-2 in the signal transducer HtrI control photochemistry and function of sensory rhodopsin I. Proc. Natl. Acad. Sci. USA. 93:6557-6561. (Pubitemid 26230346)
16. Rath, P., E. Spudich,..., K. J. Rothschild. 1996. Asp76 is the Schiff base counterion and proton acceptor in the proton-translocating form of sensory rhodopsin I. Biochemistry. 35:6690-6696.
17. Bergo, V., E. N. Spudich,..., K. J. Rothschild. 2000. FTIR analysis of the SII540 intermediate of sensory rhodopsin II: Asp73 is the Schiff base proton acceptor. Biochemistry. 39:2823-2830. (Pubitemid 30159386)
18. Bogomolni, R. A., W. Stoeckenius,..., J. L. Spudich. 1994. Removal of transducer HtrI allows electrogenic proton translocation by sensory rhodopsin I. Proc. Natl. Acad. Sci. USA. 91:10188-10192. (Pubitemid 24311974)
19. Krebs, M. P., E. N. Spudich, and J. L. Spudich. 1995. Rapid high-yield purification and liposome reconstitution of polyhistidine-tagged sensory rhodopsin I. Protein Expr. Purif. 6:780-788.
20. Ames, J. B., S. P. Fodor,..., R. A. Mathies. 1989. Bacteriorhodopsin's M412 intermediate contains a 13-cis, 14-s-trans, 15-anti-retinal Schiff base chromophore. Biochemistry. 28:3681-3687.
21. Fodor, S. P., W. T. Pollard,..., R. A. Mathies. 1988. Bacteriorhodopsin's L550 intermediate contains a C14-C15 s-trans-retinal chromophore. Proc. Natl. Acad. Sci. USA. 85:2156-2160. (Pubitemid 24315848)
22. Fodor, S. P., J. B. Ames,..., R. A. Mathies. 1988. Chromophore structure in bacteriorhodopsin's N intermediate: implications for the protonpumping mechanism. Biochemistry. 27:7097-7101.
23. Sharma, A. K., J. L. Spudich, and W. F. Doolittle. 2006. Microbial rhodopsins: functional versatility andgenetic mobility. Trends Microbiol. 14:463-469. (Pubitemid 44537809)
24. Schmies, G., M. Engelhard,..., E. Bamberg. 2001. Electrophysiological characterization of specific interactions between bacterial sensory rhodopsins and their transducers. Proc. Natl. Acad. Sci. USA. 98:1555-1559. (Pubitemid 32165537)
25. Sudo, Y., M. Iwamoto,..., N. Kamo. 2001. Photo-induced proton transport of pharaonis phoborhodopsin (sensory rhodopsin II) is ceased by association with the transducer. Biophys. J. 80:916-922. (Pubitemid 32128342)
26. Hou, S., A. Brooun,..., M. Alam. 1998. Sensory rhodopsin II transducer HtrII is also responsible for serine chemotaxis in the archaeon Halobacterium salinarum. J. Bacteriol. 180:1600-1602. (Pubitemid 28125752)
27. Sudo, Y., and J. L. Spudich. 2006. Three strategically placed hydrogenbonding residues convert a proton pump into a sensory receptor. Proc. Natl. Acad. Sci. USA. 103:16129-16134. (Pubitemid 44715163)
28. Luecke, H., B. Schobert,..., J. L. Spudich. 2001. Crystal structure of sensory rhodopsin II at 2.4 angstroms: insights into color tuning and transducer interaction. Science. 293:1499-1503. (Pubitemid 32801553)
29. Wegener, A. A., I. Chizhov,..., H. J. Steinhoff. 2000. Time-resolved detection of transient movement of helix F in spin-labelled pharaonis sensory rhodopsin II. J. Mol. Biol. 301:881-891.
30. Bordignon, E., J. P. Klare,..., H. J. Steinhoff. 2007. Analysis of lightinduced conformational changes of Natronomonas pharaonis sensory rhodopsin II by time resolved electron paramagnetic resonance spectroscopy. Photochem. Photobiol. 83:263-272. (Pubitemid 46623047)