Proteomic analysis of Singapore grouper iridovirus envelope proteins and characterization of a novel envelope protein VP088

Proteomics

Volumn 11, Issue 11, 2011, Pages 2236-2248

  Zhou, Sheng ^a   Wan, Qingjiao ^b   Huang, Youhua ^a   Huang, Xiaohong ^a   Cao, Jianhao ^c   Ye, Lili ^c   Lim, Teck Kwang ^d   Lin, Qingsong ^d   Qin, Qiwei ^a  

^a SOUTH CHINA SEA INSTITUTE OF OCEANOLOGY   (China)

^b GUIZHOU NORMAL UNIVERSITY   (China)

^c SUN YAT SEN UNIVERSITY   (China)

^d NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

Envelope proteins; Microbiology; Singapore grouper iridovirus; VP088

Indexed keywords

UNCLASSIFIED DRUG; VIRUS ENVELOPE PROTEIN; VIRUS ENVELOPE PROTEIN VP088;

ARTICLE; IRIDOVIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN GLYCOSYLATION; PROTEOMICS; SINGAPORE GROUPER IRIDOVIRUS; VIRUS ENVELOPE; VIRUS NEUTRALIZATION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BASS; BLOTTING, WESTERN; CHROMATOGRAPHY, LIQUID; IRIDOVIRUS; MICROSCOPY, IMMUNOELECTRON; MOLECULAR SEQUENCE DATA; PROTEOMICS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; VIRAL ENVELOPE PROTEINS;

ESCHERICHIA COLI; SINGAPORE GROUPER IRIDOVIRUS;

EID: 79956259568     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.200900820     Document Type: Article

References (40)

1. Piaskoski, T. O., Plumb, J. A., Characterization of the largemouth bass virus in cell culture. J. Aquat. Anim. Health 1999, 11, 45-51.
2. Hyatt, A. D., Gould, A. R., Zupanovic, Z., Cunningham, A. A. et al., Comparative studies of piscine and amphibian iridoviruses. Arch. Virol. 2000, 145, 301-331.
3. Wang, Y. Q., Lu, L., Weng, S. P., Huang, J. N. et al., Molecular epidemiology and phylogenetic analysis of a marine fish infectious spleen and kidney necrosis virus-like (ISKNV-like) virus. Arch. Virol. 2007, 152, 763-773.
4. Langdon, J. S., Humphrey, J. D., Williams, L. M., Hyatt, A. D., Westbury, H. A., First virus isolation from Australian fish: an iridovirus-like pathogen from redfin perch, Perca fluviatilis L. J. Fish Dis. 1986, 9, 262-268.
5. Ahne, W., Schlotfeldt, H. J., Thomsen, I., Fish viruses: isolation of an icosahedral cytoplasmic deoxyribovirus from sheatfish (Silurus glanis). J. Vet. Med. B 1989, 36, 333-336.
6. Inouye, K., Yamano, K., Maeno, Y., Nakajima, K. et al., Iridovirus infection of cultured red sea bream, Pagrus major. Fish Pathol. 1992, 27, 19-27.
7. Pozet, F., Morand, M., Moussa, A., Torhy, C., de Kinkelin, P., Isolation and characterization of a pathogenic icosahedral deoxyribovirus from the catfish Ictalurus melas. Dis. Aquat. Org. 1992, 14, 35-42.
8. Bloch, B., Larsen, J. L., An iridovirus-like agent associated with systemic infection in cultured turbot Scophthalmus maximus fry in Denmark. Dis. Aquat. Org. 1993, 15, 235-240.
9. Kasornchandra, J., Khongpradit, R., Isolation and preliminary characterization of a pathogenic iridovirus-like agent in nursing grouper Epinephelus malabaricus. Asian Aquac. Health News 1995, 4, 5.
10. Plumb, J. A., Grizzle, J. M., Young, H. E., Noyes, A. D., Lamprecht, S., An iridovirus isolated from wild largemouth bass. J. Aquat. Anim. Health 1996, 8, 265-270.
11. Tapiovaara, H., Olesen, N. J., Linden, J., Rimaila-Parnanen, E., von Bonsdorff, C. H., Isolation of an iridovirus from pike-perch Stizostedion lucioperca. Dis. Aquat. Org. 1998, 32, 185-193.
12. Qin, Q. W., Chang, S. F., Ngoh, G. H., Gibson-Kueh, S. et al., Characterization of a novel ranavirus isolated from grouper, Epinephelus tauvina. Dis. Aquat. Org. 2003, 53, 1-9.
13. Qin, Q. W., Lam, T. J., Sin, Y. M., Shen, H. et al., Electron microscopic observations of a marine fish iridovirus isolated from brown-spotted grouper, Epinephelus tauvina. J. Virol. Methods 2001, 98, 17-24.
14. Qin, Q. W., Shi, C. Y., Gin, K. Y. H., Lam, T. J., Antigenic characterization of a marine fish iridovirus from grouper, Epinephelus spp. J. Virol. Methods 2002, 106, 89-96.
15. Song, W. J., Qin, Q. W., Qiu, J., Huang, C. H. et al., Functional genomics analysis of Singapore grouper iridovirus: complete sequence determination and proteomic analysis. J. Virol. 2004, 78, 12576-12590.
16. Song, W. J., Lin, Q. S., Joshi, S. B., Lim, T. K., Hew, C. L., Proteomic studies of the Singapore grouper iridovirus. Mol. Cell. Proteomics 2006, 5, 256-264.
17. Li, L., Xi, X. X., Feng, Y., Identification and characterization of a prawn white spot syndrome virus gene that encodes an envelope protein VP31.Virology 2005, 340, 125-132.
18. Huang, C. H., Zhang, X. B., Lin, Q. S., Xu, X. et al., Proteomic analysis of shrimp white spot syndrome viral proteins and characterization of a novel envelope protein VP466. Mol. Cell. Proteomics 2002, 1, 223-231.
19. Hofman, K., Bucher, P., Falquet, L., Bairoch, A., The PROSITE database, its status in 1999. Nucleic Acids Res. 1999, 27, 215-219.
20. Hofman, K., Stoffel, W., TMbase-A database of membrane spanning protein segments. Biol. Chem. Hoppe Seyler 1993, 374, 166.
21. Lua, D. T., Yasuike, M., Hirono, I., Aoki, T., Transcription program of red sea bream iridovirus as revealed by DNA microarrays. J. Virol. 2005, 79, 15151-15164.
22. Martinez-Guzman, D., Rickabaugh, T., Wu, T. T., Brown, H. et al., Transcription program of murine gammaherpesvirus 68. J. Virol. 2003, 77, 10488-10503.
23. Gastka, M., Horvath, J., Lentz, T. L., Rabies virus binding to the nicotinic acetylcholine receptor α subunit demonstrated by virus overlay protein binding assay. J. Gen. Virol. 1996, 77, 2437-2440.
24. Sritunyalucksana, K., Wannapapho, W., Lo, C. F., Flegel, T. W., PmRab7 is a VP28-binding protein involved in white spot syndrome virus infection in shrimp. J. Virol. 2006, 80, 10734-10742.
25. Reed, L. J., Muench, H., A simple method of estimating fifty percent end points. Am. J. Hyg. 1938, 27, 493-497.
26. Teng, Y., Hou, Z., Gong, J., Liu, H. et al., Whole-genome transcriptional profiles of a novel marine fish iridovirus, Singapore grouper iridovirus (SGIV) in virus-infected grouper spleen cell cultures and in orange-spotted grouper, Epinephelus coioides. Virology 2008, 377, 39-48.
27. Mass, J. S., Rodriguez, J. F., Esteban, M., Structural and functional characterization of a cell surface binding protein of vaccinia virus. J. Biol. Chem. 1990, 265, 1569-1577.
28. Lambert, D. M., Barney, S., Lambert, A. L., Guthrie, K. et al., Peptides from conserved regions of powamyxovirus fusion (F) proteins are potent inhibitors of viral fusion. Proc. Natl. Acad. Sci. 1996, 93, 2186-2191.
29. Guo, J. T., Pugh, J. C., Topology of the large envelope protein of duck hepatitis B virus suggests a mechanism for membrane translocation during particle morphogenisis. J. Virol. 1997, 71, 1107-1114.
30. Fayolle, J., Verrier, B., Buckland, R., Wild, T. F., Characterization of a natural mutation in an antigenic site on the fusion protein of measles virus that is involved in neutralization. J. Virol. 1999, 73, 787-790.
31. Li, L., Qi, Y., A novel amino acid position in hemagglutinin glycoprotein of measles virus is responsible for hemadsorption and CD46 binding. Arch. Virol. 2002, 147, 775-786.
32. Braunwald, J., Tripier, F., Kirn, A., Comparison of the properties of enveloped and naked frog virus 3 (FV3) particles. J. Gen. Virol. 1979, 45, 673-682.
33. Knochenmuss, R., Zenobi, R., MALDI Ionization: the role of in-plume. Process. Chem. Rev. 2003, 103, 441-452.
34. Washburn, M. P., Wolters, D., Yates J. R., 3rd, Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat. Biotechnol. 2001, 19, 242-247.
35. Eaton, H. E., Metcalf, J., Penny, E., Tcherepanov, V. et al., Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes. Virol. J. 2007, 4, 1-17.
36. Ruoslahti, E., RGD and other recognition sequences for integrins. Annu. Rev. Cell Biol. 1996, 12, 697-715.
37. Yingmanee, B., Pamela, J. H., Farideh, G., Glyn, S., Arginine-glycine-aspartic acid motif is critical for human parechovirus 1 entry. J. Virol. 2001, 75, 10000-10004.
38. Ao, J. Q., Chen, X. H., Identification and characterization of a novel gene encoding an RGD-containing protein in large yellow croaker iridovirus. Virology 2006, 355, 213-222.
39. Schofield, D. J., Glamann, J., Emerson, U., Purchell, R. H., Identification by phage display and characterization of two neutralizing chimpanzee monoclonal antibodies to the hepatitis E virus capsid protein. J. Virol. 2000, 74, 5548-5555.
40. Wu, W. L., Wang, L., Zhang, X. B., Identification of white spot syndrome virus (WSSV) envelope proteins involved in shrimp infection. Virology 2005, 332, 578-583.