-
1
-
-
33645748095
-
What are DNA sequence motifs?
-
D'haeseleer, P.: What are DNA sequence motifs? Nature Biotechnology 24(4), 423-425 (2006)
-
(2006)
Nature Biotechnology
, vol.24
, Issue.4
, pp. 423-425
-
-
D'haeseleer, P.1
-
2
-
-
0025320805
-
An expectation maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences
-
Lawrence, C.E., Reilly, A.A.: An expectation maximization (EM) algorithm for the identification and characterization of common sites in unaligned biopolymer sequences. Proteins 7(1), 41-51 (1990)
-
(1990)
Proteins
, vol.7
, Issue.1
, pp. 41-51
-
-
Lawrence, C.E.1
Reilly, A.A.2
-
3
-
-
0025372992
-
Identification of consensus patterns in unaligned DNA sequences known to be functionally related
-
Hertz, G.Z., Hartzell, G.W., Stormo, G.D.: Identification of consensus patterns in unaligned DNA sequences known to be functionally related. Computer Applications in the Biosciences 6(2), 81-92 (1990)
-
(1990)
Computer Applications in the Biosciences
, vol.6
, Issue.2
, pp. 81-92
-
-
Hertz, G.Z.1
Hartzell, G.W.2
Stormo, G.D.3
-
4
-
-
0002759539
-
Unsupervised learning of multiple motifs in biopolymers using expectation maximization
-
Bailey, T.L., Elkan, C.: Unsupervised learning of multiple motifs in biopolymers using expectation maximization. Machine Learning 21(1-2), 51-80 (1995)
-
(1995)
Machine Learning
, vol.21
, Issue.1-2
, pp. 51-80
-
-
Bailey, T.L.1
Elkan, C.2
-
5
-
-
0027912333
-
Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment
-
Lawrence, C.E., Altschul, S.F., Boguski, M.S., Liu, J.S., Neuwald, A.F., Wootton, J.C.: Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment. Science 262(5131), 208-214 (1993)
-
(1993)
Science
, vol.262
, Issue.5131
, pp. 208-214
-
-
Lawrence, C.E.1
Altschul, S.F.2
Boguski, M.S.3
Liu, J.S.4
Neuwald, A.F.5
Wootton, J.C.6
-
6
-
-
0031787969
-
Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole genome mRNA quantitation
-
Roth, F.P., Hughes, J.D., Estep, P.W., Church, G.M.: Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole genome mRNA quantitation. Nature Biotechnology 16(10), 939-945 (1998)
-
(1998)
Nature Biotechnology
, vol.16
, Issue.10
, pp. 939-945
-
-
Roth, F.P.1
Hughes, J.D.2
Estep, P.W.3
Church, G.M.4
-
7
-
-
0035224579
-
An algorithm for finding signals of unknown length in DNA sequences
-
Pavesi, G., Mauri, G., Pesole, G.: An algorithm for finding signals of unknown length in DNA sequences. Bioinformatics 17(suppl. 1), S207-S214 (2001)
-
(2001)
Bioinformatics
, vol.17
, Issue.SUPPL. 1
-
-
Pavesi, G.1
Mauri, G.2
Pesole, G.3
-
8
-
-
4544358562
-
FMGA: Finding motifs by genetic algorithm
-
Liu, F.F.M., Tsai, J.J.P., Chen, R.M., Chen, S.N., Shih, S.H.: FMGA: finding motifs by genetic algorithm. In: Fourth IEEE Symposium on Bioinformatics and Bioengineering (BIBE 2004), p. 459 (2004)
-
(2004)
Fourth IEEE Symposium on Bioinformatics and Bioengineering (BIBE 2004)
, pp. 459
-
-
Liu, F.F.M.1
Tsai, J.J.P.2
Chen, R.M.3
Chen, S.N.4
Shih, S.H.5
-
9
-
-
0029872694
-
SAGA: Sequence alignment by genetic algorithm
-
Notredame, C., Higgins, D.G.: SAGA: Sequence alignment by genetic algorithm. Nucleic Acids Research 24(8), 1515-1524 (1996)
-
(1996)
Nucleic Acids Research
, vol.24
, Issue.8
, pp. 1515-1524
-
-
Notredame, C.1
Higgins, D.G.2
-
10
-
-
84901431286
-
Motif discovery in upstream sequences of coordinately expressed genes
-
Stine, M., Dasgupta, D., Mukatira, S.: Motif discovery in upstream sequences of coordinately expressed genes. In: The 2003 Congress on Evolutionary Computational (CEC 2003), vol. 3, pp. 1596-1603 (2003)
-
(2003)
The 2003 Congress on Evolutionary Computational (CEC 2003)
, vol.3
, pp. 1596-1603
-
-
Stine, M.1
Dasgupta, D.2
Mukatira, S.3
-
11
-
-
32444449634
-
MDGA: Motif discovery using a genetic algorithm
-
Che, D., Song, Y., Rashedd, K.: MDGA: Motif discovery using a genetic algorithm. In: Proceedings of the 2005 Conference on Genetic and Evolutionary Computation (GECCO 2005), USA, pp. 447-452 (2005)
-
(2005)
Proceedings of the 2005 Conference on Genetic and Evolutionary Computation (GECCO 2005), USA
, pp. 447-452
-
-
Che, D.1
Song, Y.2
Rashedd, K.3
-
13
-
-
77649298450
-
Motif Discovery using Evolutionary Algorithms
-
Shao, L., Chen, Y., Abraham, A.: Motif Discovery using Evolutionary Algorithms. In: International Conference of Soft Computing and Pattern Recognition (SOCPAR 2009), pp. 420-425 (2009)
-
(2009)
International Conference of Soft Computing and Pattern Recognition (SOCPAR 2009)
, pp. 420-425
-
-
Shao, L.1
Chen, Y.2
Abraham, A.3
-
14
-
-
56349123312
-
MOGAMOD: Multi-objective genetic algorithm for motif discovery
-
Kaya, M.: MOGAMOD: Multi-objective genetic algorithm for motif discovery. Expert Systems with Applications: An International Journal 36(2), 1039-1047 (2009)
-
(2009)
Expert Systems with Applications: An International Journal
, vol.36
, Issue.2
, pp. 1039-1047
-
-
Kaya, M.1
-
15
-
-
35148827874
-
-
Technical report-tr06, Erciyes University, Engineering Faculty, Computer Engineering Department
-
Karaboga, D.: An idea based on honey bee swarm for numerical optimization, Technical report-tr06, Erciyes University, Engineering Faculty, Computer Engineering Department (2005)
-
(2005)
An Idea Based on Honey Bee Swarm for Numerical Optimization
-
-
Karaboga, D.1
-
16
-
-
35148821762
-
A Powerful and Efficient Algorithm for Numerical Function Optimization: Artificial Bee Colony (ABC) Algorithm
-
Karaboga, D., Basturk, B.: A Powerful and Efficient Algorithm for Numerical Function Optimization: Artificial Bee Colony (ABC) Algorithm. Journal of Global Optimization 39(3), 459-471 (2007)
-
(2007)
Journal of Global Optimization
, vol.39
, Issue.3
, pp. 459-471
-
-
Karaboga, D.1
Basturk, B.2
-
17
-
-
79959398526
-
Solving the Motif Discovery Problem by Using Differential Evolution with Pareto Tournaments
-
IEEE Computer Society, Los Alamitos
-
González-Álvarez, D.L., Vega-Rodríguez, M.A., Gómez-Pulido, J.A., Sánchez- Pérez, J.M.: Solving the Motif Discovery Problem by Using Differential Evolution with Pareto Tournaments. In: Proceedings of the 2010 IEEE Congress on Evolutionary Computation (CEC 2010), pp. 4140-4147. IEEE Computer Society, Los Alamitos (2010)
-
(2010)
Proceedings of the 2010 IEEE Congress on Evolutionary Computation (CEC 2010)
, pp. 4140-4147
-
-
González-Álvarez, D.L.1
Vega-Rodríguez, M.A.2
Gómez-Pulido, J.A.3
Sánchez-Pérez, J.M.4
-
18
-
-
85038026212
-
A Multiobjective Variable Neighborhood Search for Solving the Motif Discovery Problem
-
Springer, Heidelberg
-
González-Álvarez, D.L., Vega-Rodríguez, M.A., Gómez-Pulido, J.A., Sónchez- Pérez, J.M.: A Multiobjective Variable Neighborhood Search for Solving the Motif Discovery Problem. In: Advances in Intelligent and Soft Computing, vol. 73, pp. 39-46. Springer, Heidelberg (2010)
-
(2010)
Advances in Intelligent and Soft Computing
, vol.73
, pp. 39-46
-
-
González-Álvarez, D.L.1
Vega-Rodríguez, M.A.2
Gómez-Pulido, J.A.3
Sónchez-Pérez, J.M.4
-
19
-
-
0037598652
-
Evolutionary Multiobjective Optimization for Base Station Transmitter Placement with Frequency Assignment
-
Weicker, N., Szabo, G., Weicker, K., Widmayer, P.: Evolutionary Multiobjective Optimization for Base Station Transmitter Placement With Frequency Assignment. IEEE Transactions on Evolutionary Computation 7, 189-203 (2003)
-
(2003)
IEEE Transactions on Evolutionary Computation
, vol.7
, pp. 189-203
-
-
Weicker, N.1
Szabo, G.2
Weicker, K.3
Widmayer, P.4
-
20
-
-
0036530772
-
A fast and elitist multi-objective genetic algorithm: NSGA II
-
Deb, K., Pratap, A., Agarwal, S., Meyarivan, T.: A fast and elitist multi-objective genetic algorithm: NSGA II. IEEE Transactions on Evolutionary Computation 6, 182-197 (2002)
-
(2002)
IEEE Transactions on Evolutionary Computation
, vol.6
, pp. 182-197
-
-
Deb, K.1
Pratap, A.2
Agarwal, S.3
Meyarivan, T.4
-
21
-
-
0034199979
-
Comparison of multiobjective evolutionary algorithms: Empirical results
-
Zitzler, E., Deb, K., Thiele, L.: Comparison of multiobjective evolutionary algorithms: empirical results. IEEE Transactions on Evolutionary Computation 8(2), 173-195 (2000)
-
(2000)
IEEE Transactions on Evolutionary Computation
, vol.8
, Issue.2
, pp. 173-195
-
-
Zitzler, E.1
Deb, K.2
Thiele, L.3
-
22
-
-
0029960055
-
TRANSFAC: A database on transcription factors and their DNA binding sites
-
Wingender, E., Dietze, P., Karas, H., Knüppel, R.: TRANSFAC: a database on transcription factors and their DNA binding sites. Nucleic Acids Research 24(1), 238-241 (1996)
-
(1996)
Nucleic Acids Research
, vol.24
, Issue.1
, pp. 238-241
-
-
Wingender, E.1
Dietze, P.2
Karas, H.3
Knüppel, R.4
|