Diversity analysis of Burkholderia cepacia complex in the water bodies of West Lake, Hangzhou, China

Journal of Microbiology

Volumn 49, Issue 2, 2011, Pages 309-314

  Fang, Yuan ^a,b   Xie, Guan lin ^a   Lou, Miao miao ^a   Li, Bin ^a   Muhammad, Ibrahim ^a  

^a ZHEJIANG UNIVERSITY   (China)

^b ZHEJIANG NORMAL UNIVERSITY   (China)

Author keywords

Burkholderia cepacia complex; detection; diversity; West Lake

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN; FRESH WATER; RECA PROTEIN;

ARTICLE; BACTERIUM IDENTIFICATION; BURKHOLDERIA CEPACIA COMPLEX; CHEMISTRY; CHINA; CLASSIFICATION; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; MOLECULAR TYPING; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

BACTERIAL PROTEINS; BACTERIAL TYPING TECHNIQUES; BURKHOLDERIA CEPACIA COMPLEX; CHINA; DNA, BACTERIAL; FRESH WATER; MOLECULAR SEQUENCE DATA; MOLECULAR TYPING; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; REC A RECOMBINASES; SEQUENCE ANALYSIS, DNA;

BACTERIA (MICROORGANISMS); BURKHOLDERIA; BURKHOLDERIA CENOCEPACIA; BURKHOLDERIA CEPACIA COMPLEX; BURKHOLDERIA MULTIVORANS; BURKHOLDERIA STABILIS; BURKHOLDERIA VIETNAMIENSIS;

EID: 79955716020     PISSN: 12258873     EISSN: 12258873     Source Type: Journal    
DOI: 10.1007/s12275-011-0267-2     Document Type: Article

References (26)

1. American Public Health Association, American Water Works Association and Water Environment Federation, 1998. Standard Methods for the Examination of Water and Wastewater, 20th ed. American Public Health Association, Washington, DC, USA.
2. Baldwin, A., E. Mahenthiralingam, P. Drevinek, C. Pope, D. J. Waine, D. A. Henry, D. P. Speert, and et al. 2008. Elucidating global epidemiology of Burkholderia multivorans in cases of cystic fibrosis by multilocus sequence typing. J. Clin. Microbiol. 46, 290-295.
3. Baldwin, A., E. Mahenthiralingam, P. Drevinek, P. Vandamme, J. R. Govan, D. J. Wane, J. J. LiPuma, and et al. 2007. Environmental Burkholderia cepacia complex isolates in human infections. Emerg. Infect. Dis. 13, 458-461.
4. Burkholder, W. H. 1950. Sour skin, a bacterial rot of onion bulbs. Phytopathology 40, 115-117.
5. Clode, F. E., M. E. Kaufmann, H. Malnick, and T. L. Pitt. 2000. Distribution of genes encoding putative transmissibility factors among epidemic and nonepidemic strains of Burkholder ia cepacia from cystic fibrosis patients in the United Kingdom. J. Clin. Microbiol. 38, 1763-1766.
6. Coenye, T. and P. Vandamme. 2003. Diversity and significance of Burkholderia species occupying diverse ecological niches. Environ. Microbiol. 5, 719-729.
7. Dalmastri, C., L. Pirone, S. Tabacchioni, A. Bevivino, and L. Chiarini. 2005. Efficacy of species-specific recA PCR tests in the identification of Burkholderia cepacia complex environmental isolates. FEMS Microbiol. Lett. 246, 39-45.
8. Fang, Y., M. M. Lou, B. Li, G. Xie, F. Wang, L. Zhang, and Y. C. Luo. 2010. Characterization of Burkholderia cepacia complex from cystic fibrosis patients in China and their chitosan susceptibility. World J. Microbiol. Biotechnol. 26, 443-450.
9. Fera, M. T., T. L. Maugeri, C. Gugliandolo, C. Beninati, M. E. Giannone LaCamera, and M. Carbone. 2004. Detection of Arcobacter spp. in the coastal environment of the Mediterranean Seasea. Appl. Environ. Microbiol. 70, 1271-1276.
10. Govan, J. R. and V. Deretic. 1996. Microbial pathogenesis in cystic fibrosis: Mucoid Pseudomonas aeruginosa and Burkholderia cepacia. Microbiol. Rev. 60, 539-574.
11. Jin, S., G. L. Wang, Q. S. Zhao, H. Q. Chen, and Y. E. Chen. 2005. Preliminary studies on pathogen and hemopathology of the hite cloud disease in Micropte snlmoide. Acta Hydrobiologica Sinica 29, 184-188. (Chinese journal with English abstract).
12. LiPuma, J. J., T. Spilker, T. Coenye, and C. F. Gonzalez. 2002. An epidemic Burkholderia cepacia complex strain identified in soil. Lancet 359, 2002-2003.
13. Mahenthiralingam, E., A. Baldwin, and C. G. Dowson. 2008. Burkholderia cepacia complex bacteria: opportunistic pathogens with important natural biology. J. Appl. Microbiol. 104, 1539-1551.
14. Mahenthiralingam, E., J. Bischof, S. K. Byrne, C. Radomski, J. E. Davies, Y. Av-Gay, and P. Vandamme. 2000. DNA-based diagnostic approaches for identification of Burkholderia cepacia complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burk holderia stabilis, Burkholderia cepacia genomovars I and III. J. Clin. Microbiol. 38, 3165-3173.
15. Mahenthiralingam, E., D. A. Simpson, and D. P. Speert. 1997. Identification and characterization of a novel DNA marker associated with epidemic Burkholderia cepacia strains recovered from patients with cystic fibrosis. J. Clin. Microbiol. 35, 808-816.
16. McDowell, A., E. Mahenthiralingam, K. E. A. Dunbar, J. E. Moore, M. Crowe, and S. J. Elborn. 2004. Epidemiology of Burkholderia cepacia complex species recovered from cystic fibrosis patients: issues related to patient segregation. J. Med. Microbiol. 53, 663-668.
17. Petrucca, A., P. Cipriani, P. Valenti, D. Santapaola, C. Cimmino, G. L. Scoarughi, I. Santino, S. Stefani, R. Sessa, and M. Nicoletti. 2003. Molecular characterization of Burkholderia cepacia isolates from cystic fibrosis (CF) patients in an Italian CF center. Res. Microbiol. 154, 491-498.
18. Pirone, L., L. Chiarini, C. Dalmastri, A. Bevivino, and S. Tabacchioni. 2005. Detection of cultured and uncultured Burkholderia cepacia complex bacteria naturally occurring in the maize rhizosphere. Environ. Microbiol. 7, 1734-1742.
19. Ramette, A., J. J. LiPuma, and J. M. Tiedje. 2005. Species abundance and diversity of Burkholderia cepacia complex in the environment. Appl. Environ. Microbiol. 71, 1193-1201.
20. Vandamme, P., D. Henry, T. Coeyne, S. Nuzla, M. Vancanneyt, J. J LiPuma, D. P. Speert, J. R. W. Govan, and E. Mahenthiralingam. 2002. Burkholderia anthina sp. nov. and Burkholderia pyrrocinia: two additional Burkholderia cepacia complex bacteria may confound results of new molecular diagnostic tools. FEMS Immunol. Med. Microbiol. 33, 143-149.
21. Vanlaere, E., A. Baldwin, D. Gevers, D. Henry, E. D. Brandt, J. J. LiPuma, E. Mahenthiralingam, D. P. Speert, C. Dowson, and P. Vandamme. 2009. Taxon K, a complex within the Burkholderia cepacia complex, comprises at least two novel species: Burkholderia contaminans sp. nov. and Burkholderia lata sp. nov. Int. J. Syst. Evol. Microbiol. 59, 102-111.
22. Vanlaere, E., J. J. LiPuma, A. Baldwin, D. Henry, E. D. Brandt, E. Mahenthiralingam, D. P. Speert, C. Dowson, and P. Vandamme. 2008. Burkholderia latens sp. nov., Burkholderia diffusa sp. nov., Burkholderia arboris sp. nov., Burkholderia seminalis sp. nov. and Burkholderia metallica sp. nov., novel species within the Burkholderia cepacia complex. Int. J. Syst. Evol. Microbiol. 58, 1580-1590.
23. Vermis, K., M. Brachkova, P. Vandamme, and H. Nelis. 2003. Isolation of Burkholderia cepacia complex genomovars from waters. Syst. Appl. Microbiol. 26, 595-600.
24. Vermis, K., T. Coenye, E. Mahenthiralingam, H. J. Nelis, and P. Vandamme. 2002. Evaluation of species-specific recA-based PCR tests for genomovar level identification within the Burkholderia cepacia complex. J. Med. Microbiol. 51, 937-940.
25. Waine, D. J., D. A. Henry, A. Baldwin, D. P. Speert, D. Honeybourne, E. Mahenthiralingam, and C. G. Dowson. 2007. Reliability of multilocus sequence typing of the Burkholderia cepacia complex in cystic fibrosis. J. Cyst. Fibros. 6, 215-219.
26. Zhang, L. X. and G. L. Xie. 2007. Diversity and distribution of Burkholderia cepacia complex in the rhizosphere of rice and maize. FEMS Microbiol. Lett. 266, 231-235.