Cloning, expression, purification, crystallization and preliminary X-ray diffraction data of the Pyrococcus horikoshii RadA intein

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 67, Issue 5, 2011, Pages 623-626

  Lyskowski, Andrzej ^a,d   Oeemig, Jesper S ^a   Jaakkonen, Anniina ^a   Rommi, Katariina ^a   Dimaio, Frank ^b   Zhou, Dongwen ^c   Kajander, Tommi ^a   Baker, David ^b   Wlodawer, Alexander ^c   Goldman, Adrian ^a   Iwa, Hideo ^a  

^a UNIVERSITY OF HELSINKI   (Finland)

^b UNIVERSITY OF WASHINGTON   (United States)

^c NATIONAL CANCER INSTITUTE   (United States)

^d UNIVERSITY OF GRAZ   (Austria)

Author keywords

inteins; NMR; protein splicing; RadA

Indexed keywords

ARCHAEAL PROTEIN; DNA BINDING PROTEIN; RADA PROTEIN, ARCHAEAL;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; CRYSTALLIZATION; GENE EXPRESSION; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR CLONING; MOLECULAR GENETICS; PYROCOCCUS HORIKOSHII; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; ARCHAEAL PROTEINS; CLONING, MOLECULAR; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; DNA-BINDING PROTEINS; GENE EXPRESSION; MOLECULAR SEQUENCE DATA; PYROCOCCUS HORIKOSHII;

ARCHAEA; PYROCOCCUS HORIKOSHII;

EID: 79955672567     PISSN: 17443091     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309111008372     Document Type: Article

References (30)

1. Aranko, A. S., Züger, S., Buchinger, E. & Iwaï, H. (2009). PLoS One, 4, e5185.
2. Belfort, M., Reaban, M. E., Coetzee, T. & Dalgaard, J. Z. (1995). J. Bacteriol. 177, 3897-3903.
3. Chong, S., Mersha, F. B., Comb, D. G., Scott, M. E., Landry, D., Vence, L. M., Perler, F. B., Benner, J., Kucera, R. B., Hirvonen, C. A., Pelletier, J. J., Paulus, H. & Xu, M.-Q. (1997). Gene, 192, 271-281.
4. Davis, E. O., Jenner, P. J., Brooks, P. C., Colston, M. J. & Sedgwick, S. G. (1992). Cell, 71, 201-210.
5. DiMaio, F., Terwilliger, T. C., Read, R. J., Wlodawer, A., Oberdorfer, G., Wagner, U., Valkov, E., Alon, A., Axelrod, H. L., Fass, D., Das, D., Vorobiev, S. M., Iwaï, H., Pokkuluri, P. R. & Baker, D. (2011). Nature (London). doi:10.1038/nature09964.
6. Evans, P. (2006). Acta Cryst. D62, 72-82.
7. Hirata, R., Ohsumi, Y., Nakano, A., Kawasaki, H., Suzuki, K. & Anraku, Y. (1990). J. Biol. Chem. 265, 6726-6733.
8. Hu, D., Crist, M., Duan, X., Quiocho, F. A. & Gimble, F. S. (2000). J. Biol. Chem. 275, 2705-2712.
9. Ichiyanagi, K., Ishino, Y., Ariyoshi, M., Komori, K. & Morikawa, K. (2000). J. Mol. Biol. 300, 889-901.
10. Iwai, H. & Plückthun, A. (1999). FEBS Lett. 459, 166-172.
11. Johnson, M. A., Southworth, M. W., Herrmann, T., Brace, L., Perler, F. B. & Wüthrich, K. (2007). Protein Sci. 16, 1316-1328.
12. Kabsch, W. (2010). Acta Cryst. D66, 125-132.
13. Kane, P. M., Yamashiro, C. T., Wolczyk, D. F., Neff, N., Goebl, M. & Stevens, T. H. (1990). Science, 250, 651-657.
14. Kantardjieff, K. A. & Rupp, B. (2003). Protein Sci. 12, 1865-1871.
15. Keegan, R. M. & Winn, M. D. (2008). Acta Cryst. D64, 119-124.
16. Klabunde, T., Sharma, S., Telenti, A., Jacobs, W. R. & Sacchettini, J. C. (1998). Nature Struct. Biol. 5, 31-36.
17. Long, F., Vagin, A. A., Young, P. & Murshudov, G. N. (2008). Acta Cryst. D64, 125-132.
18. McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C. & Read, R. J. (2007). J. Appl. Cryst. 40, 658-674.
19. Mizutani, R., Nogami, S., Kawasaki, M., Ohya, Y., Anraku, Y. & Satow, Y. (2002). J. Mol. Biol. 316, 919-929.
20. Mootz, H. D. (2009). Chembiochem, 10, 2579-2589.
21. Oeemig, J. S., Aranko, A. S., Djupsjöbacka, J., Heinämäki, K. & Iwaï, H. (2009). FEBS Lett. 583, 1451-1456.
22. Paulus, H. (2000). Annu. Rev. Biochem. 69, 447-496.
23. Paulus, H. (2003). Front. Biosci. 8, s1157-s1165.
24. Perler, F. B. (2002). Nucleic Acids Res. 30, 383-384.
25. Qian, B., Raman, S., Das, R., Bradley, P., McCoy, A. J., Read, R. J. & Baker, D. (2007). Nature (London), 450, 259-264.
26. Saleh, L. & Perler, F. B. (2006). Chem. Rec. 6, 183-193.
27. Sun, P., Ye, S., Ferrandon, S., Evans, T. C., Xu, M.-Q. & Rao, Z. (2005). J. Mol. Biol. 353, 1093-1105.
28. Vagin, A. & Teplyakov, A. (2010). Acta Cryst. D66, 22-25.
29. Volkmann, G. & Iwaï, H. (2010). Mol. Biosyst. 6, 2110-2121.
30. Volkov, V. V. & Svergun, D. I. (2003). J. Appl. Cryst. 36, 860-864.