메뉴 건너뛰기




Volumn 1807, Issue 6, 2011, Pages 746-754

Carbon metabolism and the sign of control coefficients in metabolic adaptations underlying K-ras transformation

Author keywords

Carbon metabolism; Control coefficient signs; K Ras cell transformation; Metabolic control analysis

Indexed keywords

CARBON; GLUCOSE 6 PHOSPHATE DEHYDROGENASE; K RAS PROTEIN; LACTATE DEHYDROGENASE; PENTOSE PHOSPHATE; PHOSPHATE; PYRUVATE KINASE; SUGAR; TRANSKETOLASE;

EID: 79955600638     PISSN: 00052728     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbabio.2010.11.015     Document Type: Article
Times cited : (18)

References (56)
  • 1
    • 0842268058 scopus 로고    scopus 로고
    • Effect of Crowding on Protein-Protein Association Rates: Fundamental Differences between Low and High Mass Crowding Agents
    • DOI 10.1016/j.jmb.2003.12.008
    • N. Kozer, and G. Schreiber Effect of crowding on protein-protein association rates: fundamental differences between low and high mass crowding agents J. Mol. Biol. 336 2004 763 774 (Pubitemid 38183027)
    • (2004) Journal of Molecular Biology , vol.336 , Issue.3 , pp. 763-774
    • Kozer, N.1    Schreiber, G.2
  • 2
    • 0021910945 scopus 로고
    • ORGANIZACION DEL METABOLISMO: LOCALIZACION SUBCELULAR DE ENZIMAS GLICOLITICAS
    • T. Ureta Organización del metabolismo: Localización subcelular de enzimas glicolíticas Arch. Biol. Med. Exp. 18 1985 9 32 (Pubitemid 15109752)
    • (1985) Archivos de Biologia y Medicina Experimentales , vol.18 , Issue.1 , pp. 9-32
    • Ureta, T.1
  • 6
    • 0021847426 scopus 로고
    • Metabolic control and its analysis. Additional relationships between elasticities and control coefficients
    • DOI 10.1111/j.1432-1033.1985.tb08876.x
    • D.A. Fell, and H.M. Sauro Metabolic control and its analysis. Additional relationships between elasticities and control coefficients Eur. J. Biochem. 148 1985 555 561 (Pubitemid 15074431)
    • (1985) European Journal of Biochemistry , vol.148 , Issue.3 , pp. 555-561
    • Fell, D.A.1    Sauro, H.M.2
  • 7
    • 0023385129 scopus 로고
    • Matrix method for determining steps most rate-limiting to metabolic fluxes in biotechnological processes
    • H.V. Westerhoff, and D.B. Kell Matrix method for determining steps most rate-limiting to metabolic fluxes in biotechnological processes Biotechnol. Bioeng. 30 1987 101 107
    • (1987) Biotechnol. Bioeng. , vol.30 , pp. 101-107
    • Westerhoff, H.V.1    Kell, D.B.2
  • 8
    • 0023709196 scopus 로고
    • Metabolic control theory: A structural approach
    • C. Reder Metabolic control theory: a structural approach J. Theor. Biol. 135 1988 175 201
    • (1988) J. Theor. Biol. , vol.135 , pp. 175-201
    • Reder, C.1
  • 9
    • 0024673592 scopus 로고
    • Use of implicit methods from general sensitivity theory to develop a systemic approach to metabolic control. I. Unbranched pathways
    • M. Cascante, R. Franco, and E.I. Canela Use of implicit methods from general sensitivity theory to develop a systemic approach to metabolic control. I. Unbranched pathways Math. Biosci. 94 1989 271 288
    • (1989) Math. Biosci. , vol.94 , pp. 271-288
    • Cascante, M.1    Franco, R.2    Canela, E.I.3
  • 10
    • 0024673575 scopus 로고
    • Use of implicit methods from general sensitivity theory to develop a systemic approach to metabolic control. II. Complex systems
    • M. Cascante, R. Franco, and E.I. Canela Use of implicit methods from general sensitivity theory to develop a systemic approach to metabolic control. II. Complex systems Math. Biosci. 94 1989 289 309
    • (1989) Math. Biosci. , vol.94 , pp. 289-309
    • Cascante, M.1    Franco, R.2    Canela, E.I.3
  • 11
    • 0025328919 scopus 로고
    • Metabolic control analysis. An application of signal flow graphs
    • A.K. Sen Metabolic control analysis. An application of signal flow graphs Biochem. J. 269 1990 141 147 (Pubitemid 20210852)
    • (1990) Biochemical Journal , vol.269 , Issue.1 , pp. 141-147
    • Sen, A.K.1
  • 12
    • 0025874471 scopus 로고
    • A graph-theoretic analysis of metabolic regulation in linear pathways with multiple feedback loops and branched pathways
    • A.K. Sen A graph-theoretic analysis of metabolic regulation in linear pathways with multiple feedback loops and branched pathways Biochim. Biophys. Acta 1059 1991 293 311
    • (1991) Biochim. Biophys. Acta , vol.1059 , pp. 293-311
    • Sen, A.K.1
  • 13
    • 0030574086 scopus 로고    scopus 로고
    • On the sign pattern of metabolic control coefficients
    • DOI 10.1006/jtbi.1996.0164
    • A.K. Sen On the sign pattern of metabolic control coefficients J. Theor. Biol. 182 1996 269 275 (Pubitemid 26377413)
    • (1996) Journal of Theoretical Biology , vol.182 , Issue.3 , pp. 269-275
    • Sen, A.K.1
  • 14
    • 77955499190 scopus 로고    scopus 로고
    • The carbon assimilation network in Escherichia coli is densely connected and largely sign-determined by directions of metabolic fluxes
    • V. Baldazzi, D. Ropers, Y. Markowicz, D. Kahn, J. Geiselmann, and H. de Jong The carbon assimilation network in Escherichia coli is densely connected and largely sign-determined by directions of metabolic fluxes PLoS Comput. Biol. 6 2010 e1000812
    • (2010) PLoS Comput. Biol. , vol.6 , pp. 1000812
    • Baldazzi, V.1    Ropers, D.2    Markowicz, Y.3    Kahn, D.4    Geiselmann, J.5    De Jong, H.6
  • 15
    • 33748967370 scopus 로고    scopus 로고
    • Expression of transforming K-Ras oncogene affects mitochondrial function and morphology in mouse fibroblasts
    • DOI 10.1016/j.bbabio.2006.08.001, PII S0005272806002507, Mitochondria: from Molecular Insight to Physiology and Pathology
    • F. Chiaradonna, D. Gaglio, M. Vanoni, and L. Alberghina Expression of transforming K-Ras oncogene affects mitochondrial function and morphology in mouse fibroblasts Biochim. Biophys. Acta 1757 2006 1338 1356 (Pubitemid 44442142)
    • (2006) Biochimica et Biophysica Acta - Bioenergetics , vol.1757 , Issue.9-10 , pp. 1338-1356
    • Chiaradonna, F.1    Gaglio, D.2    Vanoni, M.3    Alberghina, L.4
  • 16
    • 33748305738 scopus 로고    scopus 로고
    • Ras-dependent carbon metabolism and transformation in mouse fibroblasts
    • DOI 10.1038/sj.onc.1209528, PII 1209528
    • F. Chiaradonna, E. Sacco, R. Manzoni, M. Giorgio, M. Vanoni, and L. Alberghina Ras-dependent carbon metabolism and transformation in mouse fibroblasts Oncogene 25 2006 5391 5404 (Pubitemid 44330282)
    • (2006) Oncogene , vol.25 , Issue.39 , pp. 5391-5404
    • Chiaradonna, F.1    Sacco, E.2    Manzoni, R.3    Giorgio, M.4    Vanoni, M.5    Alberghina, L.6
  • 17
    • 61849162778 scopus 로고    scopus 로고
    • Glutamine deprivation induces abortive s-phase rescued by deoxyribonucleotides in k-ras transformed fibroblasts
    • D. Gaglio, C. Soldati, M. Vanoni, L. Alberghina, and F. Chiaradonna Glutamine deprivation induces abortive s-phase rescued by deoxyribonucleotides in k-ras transformed fibroblasts PLoS ONE 4 2009 e4715
    • (2009) PLoS ONE , vol.4 , pp. 4715
    • Gaglio, D.1    Soldati, C.2    Vanoni, M.3    Alberghina, L.4    Chiaradonna, F.5
  • 19
    • 0037805547 scopus 로고    scopus 로고
    • RAS oncogenes: The first 30 years
    • DOI 10.1038/nrc1097
    • M. Malumbres, and M. Barbacid RAS oncogenes: the first 30 years Nat. Rev. Cancer 3 2003 459 465 (Pubitemid 37328850)
    • (2003) Nature Reviews Cancer , vol.3 , Issue.6 , pp. 459-465
    • Malumbres, M.1    Barbacid, M.2
  • 22
    • 0034548712 scopus 로고    scopus 로고
    • K-ras codon 12 mutation induces higher level of resistance to apoptosis and predisposition to anchorage-independent growth than codon 13 mutation or proto-oncogene overexpression
    • S. Guerrero, I. Casanova, L. Farré, A. Mazo, G. Capellà, and R. Mangues K-ras codon 12 mutation induces higher level of resistance to apoptosis and predisposition to anchorage-independent growth than codon 13 mutation or proto-oncogene overexpression Cancer Res. 60 2000 6750 6756
    • (2000) Cancer Res. , vol.60 , pp. 6750-6756
    • Guerrero, S.1    Casanova, I.2    Farré, L.3    Mazo, A.4    Capellà, G.5    Mangues, R.6
  • 23
    • 0036778030 scopus 로고    scopus 로고
    • Codon 12 and codon 13 mutations at the K-ras gene induce different soft tissue sarcoma types in nude mice
    • S. Guerrero, A. Figueras, I. Casanova, L. Farré, B. Lloveras, G. Capellà, M. Trias, and R. Mangues Codon 12 and codon 13 mutations at the K-ras gene induce different soft tissue sarcoma types in nude mice FASEB J. 16 2002 1642 1644
    • (2002) FASEB J. , vol.16 , pp. 1642-1644
    • Guerrero, S.1    Figueras, A.2    Casanova, I.3    Farré, L.4    Lloveras, B.5    Capellà, G.6    Trias, M.7    Mangues, R.8
  • 24
  • 29
    • 34447310053 scopus 로고    scopus 로고
    • Quantification of intracellular phosphorylated carbohydrates in HT29 human colon adenocarcinoma cell line using liquid chromatography-electrospray ionization tandem mass spectrometry
    • DOI 10.1021/ac070170v
    • P. Vizán, G. Alcarraz-Vizán, S. Diaz-Moralli, J.C. Rodríguez-Prados, M. Zanuy, J.J. Centelles, O. Jáuregui, and M. Cascante Quantification of intracellular phosphorylated carbohydrates in HT29 human colon adenocarcinoma cell line using liquid chromatography-electrospray ionization tandem mass spectrometry Anal. Chem. 79 2007 5000 5005 (Pubitemid 47051455)
    • (2007) Analytical Chemistry , vol.79 , Issue.13 , pp. 5000-5005
    • Vizan, P.1    Alcarraz-Vizan, G.2    Diaz-Moralli, S.3    Rodriguez-Prados, J.C.4    Zanuy, M.5    Centelles, J.J.6    Jauregui, O.7    Cascante, M.8
  • 30
    • 73249137166 scopus 로고    scopus 로고
    • Mitochondrial complex i decrease is responsible for bioenergetic dysfunction in K-ras transformed cells
    • A. Baracca, F. Chiaradonna, G. Sgarbi, G. Solaini, L. Alberghina, and G. Lenaz Mitochondrial complex I decrease is responsible for bioenergetic dysfunction in K-ras transformed cells Biochim. Biophys. Acta 1797 2010 314 323
    • (2010) Biochim. Biophys. Acta , vol.1797 , pp. 314-323
    • Baracca, A.1    Chiaradonna, F.2    Sgarbi, G.3    Solaini, G.4    Alberghina, L.5    Lenaz, G.6
  • 32
    • 0015086056 scopus 로고
    • A NADH-dependent transketolase assay in erythrocyte hemolysates
    • E.H. Smeets, H. Muller, and J. de Wael A NADH-dependent transketolase assay in erythrocyte hemolysates Clin. Chim. Acta 33 1971 379 386
    • (1971) Clin. Chim. Acta , vol.33 , pp. 379-386
    • Smeets, E.H.1    Muller, H.2    De Wael, J.3
  • 34
    • 0033136109 scopus 로고    scopus 로고
    • Metabolic pathway analysis: Basic concepts and scientific applications in the post-genomic era
    • DOI 10.1021/bp990048k
    • C.H. Schilling, S. Schuster, B.O. Palsson, and R. Heinrich Metabolic pathway analysis: basic concepts and scientific applications in the post-genomic era Biotechnol. Prog. 15 1999 296 303 (Pubitemid 29270673)
    • (1999) Biotechnology Progress , vol.15 , Issue.3 , pp. 296-303
    • Schilling, C.H.1    Schuster, S.2    Palsson, B.O.3    Heinrich, R.4
  • 36
    • 39449095000 scopus 로고    scopus 로고
    • Stoichiometric modelling of cell metabolism
    • DOI 10.1263/jbb.105.1, PII S1389172308700173
    • F. Llaneras, and J. Picó Stoichiometric modelling of cell metabolism J. Biosci. Bioeng. 105 2008 1 11 (Pubitemid 351273657)
    • (2008) Journal of Bioscience and Bioengineering , vol.105 , Issue.1 , pp. 1-11
    • Llaneras, F.1    Pico, J.2
  • 37
    • 34247094270 scopus 로고    scopus 로고
    • An interval approach for dealing with flux distributions and elementary modes activity patterns
    • DOI 10.1016/j.jtbi.2006.12.029, PII S002251930600600X
    • F. Llaneras, and J. Picó An interval approach for dealing with flux distributions and elementary modes activity patterns J. Theor. Biol. 246 2007 290 308 (Pubitemid 46602366)
    • (2007) Journal of Theoretical Biology , vol.246 , Issue.2 , pp. 290-308
    • Llaneras, F.1    Pico, J.2
  • 38
    • 33746879141 scopus 로고    scopus 로고
    • Glycolysis inhibition for anticancer treatment
    • DOI 10.1038/sj.onc.1209597, PII 1209597
    • H. Pelicano, D.S. Martin, R.H. Xu, and P. Huang Glycolysis inhibition for anticancer treatment Oncogene 25 2006 4633 4646 (Pubitemid 44187614)
    • (2006) Oncogene , vol.25 , Issue.34 , pp. 4633-4646
    • Pelicano, H.1    Martin, D.S.2    Xu, R.-H.3    Huang, P.4
  • 40
    • 78549246623 scopus 로고    scopus 로고
    • Pyruvate kinase type M2: A key regulator of the metabolic budget system in tumor cells
    • S. Mazurek Pyruvate kinase type M2: a key regulator of the metabolic budget system in tumor cells Int. J. Biochem. Cell Biol. 2010 (doi: 10.1016)
    • (2010) Int. J. Biochem. Cell Biol.
    • Mazurek, S.1
  • 41
    • 37549020279 scopus 로고    scopus 로고
    • Regulation of pyruvate kinase type M2 by A-Raf: A possible glycolytic stop or go mechanism
    • S. Mazurek, H.C. Drexler, J. Troppmair, E. Eigenbrodt, and U.R. Rapp Regulation of pyruvate kinase type M2 by A-Raf: a possible glycolytic stop or go mechanism Anticancer Res. 27 2007 3963 3971
    • (2007) Anticancer Res. , vol.27 , pp. 3963-3971
    • Mazurek, S.1    Drexler, H.C.2    Troppmair, J.3    Eigenbrodt, E.4    Rapp, U.R.5
  • 42
    • 10044224601 scopus 로고    scopus 로고
    • Metabolic control analysis under uncertainty: Framework development and case studies
    • DOI 10.1529/biophysj.104.048090
    • L. Wang, I. Birol, and V. Hatzimanikatis Metabolic control analysis under uncertainty: framework development and case studies Biophys. J. 87 2004 3750 3763 (Pubitemid 39602883)
    • (2004) Biophysical Journal , vol.87 , Issue.6 , pp. 3750-3763
    • Wang, L.1    Birol, I.2    Hatzimanikatis, V.3
  • 43
    • 44449147036 scopus 로고    scopus 로고
    • Tumor Cell Metabolism: Cancer's Achilles' Heel
    • DOI 10.1016/j.ccr.2008.05.005, PII S1535610808001608
    • G. Kroemer, and J. Pouyssegur Tumor cell metabolism: cancer's Achilles' heel Cancer Cell 13 2008 472 482 (Pubitemid 351766797)
    • (2008) Cancer Cell , vol.13 , Issue.6 , pp. 472-482
    • Kroemer, G.1    Pouyssegur, J.2
  • 44
    • 38949107594 scopus 로고    scopus 로고
    • Robust metabolic adaptation underlying tumor progression
    • DOI 10.1007/s11306-007-0101-3
    • P. Vizán, S. Mazurek, and M. Cascante Robust metabolic adaptation underlying tumor progression Metabolomics 4 2008 1 12 (Pubitemid 351217585)
    • (2008) Metabolomics , vol.4 , Issue.1 , pp. 1-12
    • Vizan, P.1    Mazurek, S.2    Cascante, M.3
  • 45
    • 2942701935 scopus 로고    scopus 로고
    • Evaluation of Myc E-box phylogenetic footprints in glycolytic genes by chromatin immunoprecipitation assays
    • DOI 10.1128/MCB.24.13.5923-5936.2004
    • J.W. Kim, K.I. Zeller, Y. Wang, A.G. Jegga, B.J. Aronow, K.A. O'Donnell, and C.V. Dang Evaluation of myc E-box phylogenetic footprints in glycolytic genes by chromatin immunoprecipitation assays Mol. Cell. Biol. 24 2004 5923 5936 (Pubitemid 38787976)
    • (2004) Molecular and Cellular Biology , vol.24 , Issue.13 , pp. 5923-5936
    • Kim, J.-W.1    Zeller, K.I.2    Wang, Y.3    Jegga, A.G.4    Aronow, B.J.5    O'Donnell, K.A.6    Dang, C.V.7
  • 46
    • 34547580590 scopus 로고    scopus 로고
    • HIF and c-Myc: Sibling Rivals for Control of Cancer Cell Metabolism and Proliferation
    • DOI 10.1016/j.ccr.2007.07.006, PII S1535610807002048
    • J.D. Gordan, C.B. Thompson, and M.C. Simon HIF and c-Myc: sibling rivals for control of cancer cell metabolism and proliferation Cancer Cell 12 2007 108 113 (Pubitemid 47199124)
    • (2007) Cancer Cell , vol.12 , Issue.2 , pp. 108-113
    • Gordan, J.D.1    Thompson, C.B.2    Simon, M.C.3
  • 47
    • 76349095132 scopus 로고    scopus 로고
    • Defining the role of hypoxia-inducible factor 1 in cancer biology and therapeutics
    • G.L. Semenza Defining the role of hypoxia-inducible factor 1 in cancer biology and therapeutics Oncogene 29 2010 625 634
    • (2010) Oncogene , vol.29 , pp. 625-634
    • Semenza, G.L.1
  • 48
    • 76049100577 scopus 로고    scopus 로고
    • HIF-1: Upstream and downstream of cancer metabolism
    • G.L. Semenza HIF-1: upstream and downstream of cancer metabolism Curr. Opin. Genet. Dev. 20 2010 51 56
    • (2010) Curr. Opin. Genet. Dev. , vol.20 , pp. 51-56
    • Semenza, G.L.1
  • 49
    • 0027301842 scopus 로고
    • A universal method for achieving increases in metabolite production
    • H. Kacser, and L. Acerenza A universal method for achieving increases in metabolite production Eur. J. Biochem. 216 1993 361 367 (Pubitemid 23276282)
    • (1993) European Journal of Biochemistry , vol.216 , Issue.2 , pp. 361-367
    • Kacser, H.1    Acerenza, L.2
  • 50
    • 0034107704 scopus 로고    scopus 로고
    • Human glucose-6-phosphate dehydrogenase (G6PD) gene transforms NIH 3T3 cells and induces tumors in nude mice
    • DOI 10.1002/(SICI)1097-0215(20000315)85:6<857::AID-IJC20>3.0.CO;2-U
    • W. Kuo, J. Lin, and T.K. Tang Human glucose-6-phosphate dehydrogenase (G6PD) gene transforms NIH 3T3 cells and induces tumors in nude mice Int. J. Cancer 85 2000 857 864 (Pubitemid 30131478)
    • (2000) International Journal of Cancer , vol.85 , Issue.6 , pp. 857-864
    • Kuo, W.-Y.1    Lin, J.-Y.2    Tang, T.K.3
  • 54
    • 0344223439 scopus 로고    scopus 로고
    • 1 phase cycle arrest in Ehrlich's tumor cells through inhibition of the pentose cycle
    • DOI 10.1016/S0014-5793(99)00924-2, PII S0014579399009242
    • B. Raïs, B. Comin, J. Puigjaner, J.L. Brandes, E. Creppy, D. Saboureau, R. Ennamany, W.-N. Paul Lee, L.G. Boros, and M. Cascante Oxythiamine and dehydroepiandrosterone induce a G1 phase cycle arrest in Ehrlich's tumor cells through inhibition of the pentose cycle FEBS Lett. 456 1999 113 118 (Pubitemid 29339052)
    • (1999) FEBS Letters , vol.456 , Issue.1 , pp. 113-118
    • Rais, B.1    Comin, B.2    Puigjaner, J.3    Brandes, J.L.4    Creppy, E.5    Saboureau, D.6    Ennamany, R.7    Paul Lee, W.-N.8    Boros, L.G.9    Cascante, M.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.