Analysis of the epitope structure of Plum pox virus coat protein

Phytopathology

Volumn 101, Issue 5, 2011, Pages 611-619

  Candresse, Thierry ^a   Saenz, Pilar ^b,f   García, Juan Antonio ^b   Boscia, Donato ^c   Navratil, Milan ^d   Gorris, Maria Teresa ^e   Cambra, Mariano ^e  

^a UNIVERSITÉ DE BORDEAUX   (France)

^b CSIC   (Spain)

^c INSTITUTE FOR SUSTAINABLE PLANT PROTECTION   (Italy)

^d PALACKÝ UNIVERSITY   (Czech Republic)

^e INSTITUTO VALENCIANO DE INVESTIGACIONES AGRARIAS IVIA   (Spain)

^f Parque Tecnologico de Bizkaia   (Spain)

Author keywords

Sharka

Indexed keywords

CAPSID PROTEIN; COAT PROTEIN, PLUM POX VIRUS; EPITOPE; MONOCLONAL ANTIBODY; RECOMBINANT PROTEIN; VIRUS ANTIBODY;

AMINO ACID SEQUENCE; ANTIBODY SPECIFICITY; ARTICLE; CHEMISTRY; ENZYME LINKED IMMUNOSORBENT ASSAY; EPITOPE MAPPING; ESCHERICHIA COLI; GENETICS; IMMUNOLOGY; METHODOLOGY; MOLECULAR GENETICS; MOSAIC VIRUS; PLANT DISEASE; PRUNUS; SEQUENCE ALIGNMENT; VIROLOGY; WESTERN BLOTTING;

AMINO ACID SEQUENCE; ANTIBODIES, MONOCLONAL; ANTIBODIES, VIRAL; ANTIBODY SPECIFICITY; BLOTTING, WESTERN; CAPSID PROTEINS; ENZYME-LINKED IMMUNOSORBENT ASSAY; EPITOPE MAPPING; EPITOPES; ESCHERICHIA COLI; MOLECULAR SEQUENCE DATA; PLANT DISEASES; PLUM POX VIRUS; PRUNUS; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT;

ESCHERICHIA COLI; PLUM POX VIRUS;

EID: 79955592663     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-10-10-0274     Document Type: Article

References (48)

1. Asensio, M. 1996. El virus de la Sharka (plum pox virus): Caracterizacion, diagnóstico y detección mediante anticuerpos monoclonales especificos. Ph. D. thesis, Universidad Politécnica de Valencia (UPV), Valencia, Spain.
2. Boscia, D., Zeramdini, H., Cambra, M., Potere, O., Gorris, M. T., Myrta, A., Di Terlizzi, B., and Savino, V. 1997. Production and characterization of a monoclonal antibody specific to the M serotype of plum pox potyvirus. Eur. J. Plant Pathol. 103:477-480. (Pubitemid 27358148)
3. Cambra, M., Asensio, M., Gorris, M. T., Pérez, E., Camarasa, E., García, J. A., Moya, J. J., López-Abella, D., Vela, C., and Sanz, A. 1994. Detection of plum pox potyvirus using monoclonal antibodies to structural and non-structural proteins. EPPO Bull. 24:569-577.
4. Cambra, M., Boscia, D., Myrta, A., Plakovics, L., Navratil, M., Barba, M., Gorris, M. T., and Capote, N. 2006. Detection and characterization of Plum pox virus: Serological methods. EPPO Bull. 36:254-261. (Pubitemid 44892409)
5. Cambra, M., Capote, N., Myrta, A., and Llacer, G. 2006. Plum pox virus and the estimated costs associated with Sharka disease. EPPO Bull. 36:202-204. (Pubitemid 44892400)
6. Candresse, T., and Cambra, M. 2006. Plum pox virus strains or types: Historical perspective and current status. EPPO Bull. 36:239-246. (Pubitemid 44892406)
7. Candresse, T., Cambra, M., Dallot, S., Lanneau, M., Asensio, M., Gorris, M. T., Revers, F., Macquaire, G., Olmos, A., Boscia, D., Quiot, J. B., and Dunez, J. 1998. Comparison of monoclonal antibodies and polymerase chain reaction assays for the typing of isolates belonging to the D and M serotypes of plum pox potyvirus. Phytopathology 88:198-204. (Pubitemid 28155919)
8. Candresse, T., Macquaire, G., Lanneau, M., Bousalem, M., Quiot-Douine, L., Quiot, J. B., and Dunez, J. 1995. Analysis of plum pox potyvirus variability and development of strain-specific PCR assays. Acta Hortic. 386:357-369.
9. Candresse, T., Macquaire, G., Lanneau, M., Bousalem, M., Wetzel, T., Quiot-Douine, L., Quiot, J. B., and Dunez, J. 1994. Detection of plum pox potyvirus and analysis of its molecular variability using immunocapture-PCR. EPPO Bull. 24:585-594.
10. Candresse, T., Rafia, F., Cambra, M., Asensio, M., Navratil, M., García, J. A., Boscia, D., Barba, M., and Dunez, J. 1998. Characterization of Plum pox virus coat protein epitopes using fusion proteins expressed in E. coli. Acta Hortic. 472:461-467.
11. Cervera, M., Esteban, O., Gil, M., Gorris, M. T., Martínez, M. C., Pena, L., and Cambra, M. 2010. Transgenic expression in citrus of single-chain antibody fragments specific to Citrus tristeza virus confers virus resistance. Trangenic Res. doi:10.1007/s11248-010-9378-5.
12. Cervera, M. T. 1993. Análisis de determinantes de patogenicidad del virus de la sharka. Estudio molecular del aislado Ph. D. thesis, Universidad Autónoma de Madrid.
13. Cervera, M. T., Riechmann, J. L., Martin, M. T., and García, J. A. 1993. 3′-Terminal sequence of the plum pox virus PS and o6 isolates: Evidence for RNA recombination within the potyvirus group. J. Gen. Virol. 74:329-334. (Pubitemid 23092884)
14. Chikh Ali, M., Maoka, T., and Natsuaki, K. T. 2007. A point mutation changes the serotype of a Potato virus Y isolate; genomic determination of the serotype of PVY strains. Virus Genes 35:359-367. (Pubitemid 47087563)
15. Crescenzi, A., d'Aquino, L., Nuzzaci, M., Ostuni, A., Bavoso, A., Comes, S., De Stradis, A., and Piazzolla, P. 1997. Production of strain specific antibodies against a synthetic polypeptide corresponding to the N-terminal region of the plum pox potyvirus coat protein. J. Virol. Methods 69:181-189. (Pubitemid 28057060)
16. Croft, H., Malinowski, T., Krizbai, L., Mikec, I., Kajic, V., Reed, C., Varga, A., and James, D. 2008. Use of Luminex xMAP-derived Bio-Plex bead-based suspension array for specific detection of PPV-W and characterization of epitopes on the coat protein of the virus. J. Virol. Methods 153:203-213.
17. Dallot, S., Labonne, G., Quiot-Douine L., Boeglin M., Candresse T., and Quiot, J. B. 1998. Peculiar plum pox potyvirus D-populations are epidemic in peach trees. Acta Hortic. 472:355-365.
18. Desbiez, C., Gal-On, A., Raccah, B., and Lecoq, H. 1997. Characterization of epitopes on zucchini yellow mosaic potyvirus coat protein permits studies on the interaction between strains. J. Gen. Virol. 78:2073-2076. (Pubitemid 27367696)
19. Dunez, J., and Sutic, D. 1988. Plum pox virus. Pages 44-46 in: European Handbook of Plant Diseases. I. M. Smith, J. Dunez, R. A. Lelliot, D. H. Philips, and S. A. Archer, eds. Blackwell Scientific Publications, Oxford, UK.
20. Fernández-Fernández, M. R., Martínez-Torrecuadrada, J. L., Roncal, F., Domínguez, E., and García, J. A. 2002. Identification of immunogenic hot spots within plum pox potyvirus capsid protein for efficient antigen presentation. J. Virol. 76:12646-12653. (Pubitemid 35386949)
21. Glasa, M., and Candresse, T. 2005. Partial sequence analysis of an atypical Turkish isolate provides further information on the evolutionary history of Plum pox virus (PPV). Virus Res. 108:199-206. (Pubitemid 40170349)
22. Glasa M., Marie-Jeanne, V., Moury, B., Kudela, O., and Quiot, J. B. 2002. Molecular variability of the P3-6K1 genomic region among geographically and biologically distinct isolates of Plum pox virus. Arch. Virol. 147:563-575. (Pubitemid 34179628)
23. Glasa, M., Palkovics, L., Kominek, P., Labonne, G., Pittnerova, S., Kudela, O., Candresse, T., and Subr, Z. 2004. Geographically and temporally distant natural recombinant isolates of Plum pox virus (PPV) are genetically very similar and form a unique PPV subgroup. J. Gen. Virol. 85:2671-2781.
24. Hammond, H., and Hammond, R. W. 1989. Molecular cloning, sequencing and expression in Escherichia coli of the bean yellow mosaic virus coat-protein gene. J. Gen. Virol. 70:1961-1974.
25. Hammond, J., Jordan, R. L., and Kamo, K. K. 1990. Use of chimeric coat protein constructs and deletion mutants to examine potyvirus structure and coat protein mediated resistance. (Abstr.) Phytopathology 80:1018.
26. Herlitze, S., and Koenen, M. 1990. A general and rapid mutagenesis method using polymerase chain reaction. Gene 91:143-147. (Pubitemid 20293250)
27. Hewish, D. R., Xiao, X. W., Mishra, A., Gough, K. H., and Shukla, D. D. 1993. Characterization and epitope analysis of monoclonal antibodies to clover yellow vein and Johnsongrass mosaic potyviruses. Arch. Virol. 133:127-141.
28. Hilgert, I., Cikanek, D., Kristofova, H., Karesova, R., and Navratil, M. 1993. Monoclonal antibodies suitable for plum pox virus determination. Hybridoma 12:215-220. (Pubitemid 23202623)
29. James, D., and Varga, A. 2005. Nucleotide sequence analysis of Plum pox virus isolate W3174: Evidence of a new strain. Virus Res. 110:143-150. (Pubitemid 40544556)
30. Jayaram, C., van Deusen, R. A., Eggenberger, A. L., Schwabacher, A. W., and Hill, J. H. 1998. Characterization of a monoclonal antibody recognizing a DAG-containing epitope conserved in aphid transmissible potyviruses: Evidence that the DAG motif is in a defined conformation. Virus Res. 58:1-11. (Pubitemid 28546717)
31. Jordan, R. L. 1992. Potyviruses, monoclonal antibodies and antigenic sites. Arch. Virol. (Suppl.) 5:81-95.
32. Kirschman, J. A., and Cramer, J. H. 1988. Two new tools: Multi-purpose cloning vectors that carry kanamycin or spectinomycin/streptomycin resistance markers. Gene 68:163-165.
33. Kundu, A. K., Ohshima, K., and Sako, N. 1998. Comparison of coat protein epitopes of two zucchini yellow mosaic virus isolates. Acta Virol. 42:167-173. (Pubitemid 28505571)
34. López-Moya, J. J., Sanz, A., Cambra, M., Gorris, M. T., Anaya, C., Miguet, J. G., Cortés, E., and López-Abella, D. 1994. Production and characterization of monoclonal antibodies to plum pox virus and their use in the differentiation of Mediterranean isolates. Arch. Virol. 135:293-304. (Pubitemid 2068432)
35. Myrta, A., Potere, O., Boscia, D., Candresse, T., Cambra, M., and Savino, V. 1998. Production of a monoclonal antibody specific to the El Amar strain of Plum pox virus. Acta Virol. 42:248-250. (Pubitemid 29063392)
36. Myrta, A., Potere, O., Crescenzi, A., Nuzzaci, M., and Boscia, D. 2000. Production of two monoclonal antibodies specific to cherry strain of Plum pox virus. J. Plant Pathol. 82:95-103.
37. Nemchinov, L., and Hadidi, A. 1996. Characterization of the sour cherry strain of plum pox virus. Phytopathology 86:575-580. (Pubitemid 26312270)
38. Nemchinov, L., Hadidi, A., Maiss, E., Cambra, M., Candresse, T., and Damsteegt, V. 1996. Sour cherry strain of plum pox potyvirus (PPV): Molecular and serological evidence for a new subgroup of PPV strains. Phytopathology 86:1215-1221. (Pubitemid 26393021)
39. Olmos A., Cambra M., Dasi M. A., Candresse T., Esteban O., Gorris M. T., and Asensio M. 1997. Simultaneous detection and typing of plum pox potyvirus (PPV) isolates by heminested-PCR and PCR-ELISA. J. Virol. Methods 68:127-137. (Pubitemid 27417772)
40. Roy, A. S., and Smith, I. M. 1994. Plum pox situation in Europe. EPPO Bull. 24:515-523.
41. Sáenz, P., Cervera, M. T., Dallot, S., Quiot, L., Quiot, J. B., Riechmann, J. L., and García, J. A. 2000. Identification of a pathogenicity determinant of Plum pox virus in the sequence encoding the C-terminal region of protein P3+6K1. J. Gen. Virol. 81:557-566. (Pubitemid 30105486)
42. Shukla, D. D., Strike, P. M., Tracy, S. L., Gough, K. H., and Ward, C. W. 1988. The N and C termini of the coat proteins of potyviruses are surfacelocated and the N-terminus contains the major virus-specific epitopes. J. Gen. Virol. 69:1497-1508.
43. Shukla, D. D., Tribbick, G., Mason, T. J., Hewish, D. R., Geysen, H. M., and Ward, C. W. 1989. Localization of virus-specific and groupspecific epitopes of plant potyviruses by systematic immunochemical analysis of overlapping peptide fragments. Proc. Natl. Acad. Sci. USA 86:8192-8196.
44. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F., and Higgins, D. G. 1997. The Clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882. (Pubitemid 28022245)
45. Ulubas Serce, C., Candresse, T., Svanella-Dumas, L., Krizbai, L., Gazel, M., and Caglayan, K. 2009. Further characterization of a new recombinant group of Plum pox virus isolates, PPV-T, found in orchards in the Ankara province of Turkey. Virus Res. 142:121-126.
46. Van Regenmortel, M. H. 1989. Structural and functional approaches to the study of protein antigenicity. Immunol. Today 10:266-272. (Pubitemid 19176750)
47. Wetzel, T., Candresse, T., Macquaire, G., Ravelonandro, M., and Dunez, J. 1992. A highly sensitive immunocapture polymerase chain reaction method for plum pox potyvirus detection. J. Virol. Methods 39:27-37.
48. Wetzel, T., Candresse, T., Ravelonandro, M., Delbos, R. P., Mazyad, H., Aboul-Ata, E. E., and Dunez, J. 1991. Nucleotide sequence of the 3′-terminal region of the RNA of the El Amar strain of plum pox potyvirus. J. Gen. Virol. 72:1741-1746.