Constructing accurate contact maps for hydroxyl-radical-cleavage-based high-throughput RNA structure inference

IEEE Transactions on Biomedical Engineering

Volumn 58, Issue 5, 2011, Pages 1347-1355

  Kim, Jinkyu ^a   Kim, Hanjoo ^b   Min, Hyeyoung ^c   Yoon, Sungroh ^b  

^a LG Display Co Ltd   (South Korea)

^b Korea University   (South Korea)

^c Chung Ang University   (South Korea)

Author keywords

Biological signal processing; deconvolution; pattern recognition; ribonucleic acid (RNA); structural bioinformatics

Indexed keywords

2-D ELECTROPHORESIS; AUTOMATED METHODS; BIOLOGICAL SIGNALS; CONTACT MAPS; CONTACT POINTS; DECONVOLUTION METHOD; EVALUATION METRICS; F-MEASURE; HIGH-THROUGHPUT; HYDROXYL RADICALS; INNOVATIVE METHOD; INTERACTION POINTS; RIBONUCLEIC ACID; RNA STRUCTURES; RNA TERTIARY STRUCTURE; STATISTICAL LEARNING TECHNIQUES; STRUCTURAL BIOINFORMATICS; TERTIARY STRUCTURES;

BIOINFORMATICS; ELECTROPHORESIS; PATTERN RECOGNITION; RNA; SIGNAL PROCESSING;

NUCLEIC ACIDS;

HYDROXYL RADICAL;

ALGORITHM; ARTICLE; DENATURATION; ELECTROPHORESIS; GEL; HIGH THROUGHPUT SCREENING; NOISE; RNA CLEAVAGE; RNA STRUCTURE; SIGNAL DETECTION; STATISTICAL ANALYSIS; TWO DIMENSIONAL ELECTROPHORESIS;

COMPUTATIONAL BIOLOGY; HIGH-THROUGHPUT SCREENING ASSAYS; HYDROXYL RADICAL; MODELS, GENETIC; MODELS, STATISTICAL; NUCLEIC ACID CONFORMATION; PATTERN RECOGNITION, AUTOMATED; RNA; RNA INTERFERENCE; RNA, CATALYTIC; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING, COMPUTER-ASSISTED; TETRAHYMENA;

EID: 79955547726     PISSN: 00189294     EISSN: None     Source Type: Journal    
DOI: 10.1109/TBME.2011.2109716     Document Type: Article

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