Admixture mapping to identify spontaneous preterm birth susceptibility loci in African Americans

Obstetrics and Gynecology

Volumn 117, Issue 5, 2011, Pages 1078-1084

  Manuck, Tracy A ^a   Lai, Yinglei ^a   Meis, Paul J ^a   Sibai, Baha ^a   Spong, Catherine Y ^a   Rouse, Dwight J ^a   Iams, Jay D ^a   Caritis, Steve N ^a   O'sullivan, Mary J ^a   Wapner, Ronald J ^a   Mercer, Brian ^a   Ramin, Susan M ^a   Peaceman, Alan M ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

ADMIXTURE MAPPING; AFRICAN AMERICAN; ARTICLE; BODY MASS; CASE CONTROL STUDY; CHROMOSOME 7Q; CLINICAL ASSESSMENT; DNA EXTRACTION; FEMALE; GENE AMPLIFICATION; GENE IDENTIFICATION; GENE LOCUS; GENE MAPPING; GENETIC SUSCEPTIBILITY; GENETIC VARIABILITY; GENOTYPE; GENOTYPE ENVIRONMENT INTERACTION; HUMAN; MAJOR CLINICAL STUDY; PREMATURE LABOR; PRIORITY JOURNAL; PROSPECTIVE STUDY; SALIVA; SINGLE NUCLEOTIDE POLYMORPHISM; TOBACCO DEPENDENCE;

EID: 79955528033     PISSN: 00297844     EISSN: None     Source Type: Journal    
DOI: 10.1097/AOG.0b013e318214e67f     Document Type: Article

References (31)

1. Tsai HJ, Yu Y, Zhang S, Pearson C, Ortiz K, Xu X, et al. Association of genetic ancestry with preterm delivery and related traits among African American mothers. Am J Obstet Gynecol 2009;201:94.e1-10.
2. Blackmore-Prince C, Kieke B Jr, Kugaraj KA, Ferre C, Elam- Evans LD, Krulewitch CJ, et al. Racial differences in the patterns of singleton preterm delivery in the 1988 National Maternal and Infant Health Survey. Matern Child Health J 1999;3:189-97.
3. Behrman RE, Butler AS, editors. Preterm birth: cause, consequence, and prevention. Washington (DC): Institute of Medicine of the National Academies (Committee on Understanding Premature Birth and Assuring Healthy Outcomes Board on Health Science Policy); 2006.
4. Schieve LA, Handler A. Preterm delivery and perinatal death among black and white infants in a Chicago-area perinatal registry. Obstet Gynecol 1996;88:356-63. (Pubitemid 26293278)
5. Ananth CV, Misra DP, Demissie K, Smulian JC. Rates of preterm delivery among Black women and White women in the United States over two decades: an age-period-cohort analysis. Am J Epidemiol 2001;154:657-65. (Pubitemid 32888784)
6. Aveyard P, Cheng KK, Manaseki S, Gardosi J. The risk of preterm delivery in women from different ethnic groups. BJOG 2002;109:894-9. (Pubitemid 37337968)
7. Palomar L, DeFranco EA, Lee KA, Allsworth JE, Muglia LJ. Paternal race is a risk factor for preterm birth. Am J Obstet Gynecol 2007;197:152.e1-7.
8. Esplin MS. Preterm birth: a review of genetic factors and future directions for genetic study. Obstet Gynecol Surv 2006;61: 800-6. (Pubitemid 44808702)
9. Crider KS, Whitehead N, Buus RM. Genetic variation associated with preterm birth: a HuGE review. Genet Med 2005;7: 593-604. (Pubitemid 41753010)
10. Gibson CS, MacLennan AH, Dekker GA, Goldwater PN, Dambrosia JM, Munroe DJ, et al. Genetic polymorphisms and spontaneous preterm birth. Obstet Gynecol 2007;109:384-91. (Pubitemid 46197432)
11. Murtha AP, Nieves A, Hauser ER, Swamy GK, Yonish BA, Sinclair TR, et al. Association of maternal IL-1 receptor antagonist intron 2 gene polymorphism and preterm birth. Am J Obstet Gynecol 2006;195:1249-53. (Pubitemid 44635394)
12. Ryckman KK, Morken NH, White MJ, Velez DR, Menon R, Fortunato SJ, et al. Maternal and fetal genetic associations of PTGER3 and PON1 with preterm birth. PLoS One 2010;5: e9040.
13. Anum EA, Springel EH, Shriver MD, Strauss JF 3rd. Genetic contributions to disparities in preterm birth. Pediatr Res 2009; 65:1-9.
14. Fortunato SJ, Menon R, Velez DR, Thorsen P, Williams SM. Racial disparity in maternal-fetal genetic epistasis in spontaneous preterm birth. Am J Obstet Gynecol 2008;198:666.e1-9; discussion 666.e9-10.
15. Menon R, Pearce B, Velez DR, Merialdi M, Williams SM, Fortunato SJ, et al. Racial disparity in pathophysiologic pathways of preterm birth based on genetic variants. Reprod Biol Endocrinol 2009;7:62.
16. Patterson N, Hattangadi N, Lane B, Lohmueller KE, Hafler DA, Oksenberg JR, et al. Methods for high-density admixture mapping of disease genes. Am J Hum Genet 2004;74: 979-1000. (Pubitemid 38578397)
17. Smith MW, Patterson N, Lautenberger JA, Truelove AL, McDonald GJ, Waliszewska A, et al. A high-density admixture map for disease gene discovery in african americans. Am J Hum Genet 2004;74:1001-13. (Pubitemid 38568970)
18. Nievergelt CM, Schork NJ. Admixture mapping as a gene discovery approach for complex human traits and diseases. Curr Hypertens Rep 2005;7:31-7. (Pubitemid 40277788)
19. Smith MW, Lautenberger JA, Shin HD, Chretien JP, Shrestha S, Gilbert DA, et al. Markers for mapping by admixture linkage disequilibrium in African American and Hispanic populations. Am J Hum Genet 2001;69:1080-94. (Pubitemid 33015823)
20. Reich D, Patterson N. Will admixture mapping work to find disease genes? Philos Trans R Soc Lond B Biol Sci 2005;360: 1605-7.
21. Montana G, Pritchard JK. Statistical tests for admixture mapping with case-control and cases-only data. Am J Hum Genet 2004;75:771-89. (Pubitemid 39390486)
22. Basu A, Tang H, Arnett D, Gu CC, Mosley T, Kardia S, et al. Admixture mapping of quantitative trait loci for BMI in African Americans: evidence for loci on chromosomes 3q, 5q, and 15q. Obesity (Silver Spring) 2009;17:1226-31.
23. Cheng CY, Reich D, Coresh J, Boerwinkle E, Patterson N, Li M, et al. Admixture mapping of obesity-related traits in African Americans: the Atherosclerosis Risk in Communities (ARIC) Study. Obesity (Silver Spring) 2010;18:563-72.
24. Deo RC, Patterson N, Tandon A, McDonald GJ, Haiman CA, Ardlie K, et al. A high-density admixture scan in 1,670 African Americans with hypertension. PLoS Genet 2007;3:e196.
25. Freedman ML, Haiman CA, Patterson N, McDonald GJ, Tandon A, Waliszewska A, et al. Admixture mapping identifies 8q24 as a prostate cancer risk locus in African-American men. Proc Natl Acad Sci U S A 2006;103:14068-73. (Pubitemid 44452981)
26. Meis PJ, Klebanoff M, Thom E, Dombrowski MP, Sibai B, Moawad AH, et al. Prevention of recurrent preterm delivery by 17 alpha-hydroxyprogesterone caproate. N Engl J Med 2003;348:2379-85. (Pubitemid 36682816)
27. Reich D, Patterson N, De Jager PL, McDonald GJ, Waliszewska A, Tandon A, et al. A whole-genome admixture scan finds a candidate locus for multiple sclerosis susceptibility. Nat Genet 2005;37:1113-8. (Pubitemid 41486665)
28. Wang H, Parry S, Macones G, Sammel MD, Kuivaniemi H, Tromp G, et al. A functional SNP in the promoter of the SERPINH1 gene increases risk of preterm premature rupture of membranes in African Americans [published erratum appears in Proc Natl Acad Sci U S A 2006;103:19212]. Proc Natl Acad Sci U S A 2006;103:13463-7. (Pubitemid 44380130)
29. Bock CH, Schwartz AG, Ruterbusch JJ, Levin AM, Neslund- Dudas C, Land SJ, et al. Results from a prostate cancer admixture mapping study in African-American men. Hum Genet 2009;126:637-42.
30. Tandon A, Patterson N, Reich D. Ancestry informative marker panels for African Americans based on subsets of commercially available SNP arrays. Genet Epidemiol 2011;35:80-3.
31. Illumina- Products-African American Admixture Panel. Available at: www.illumina.com/Documents/products/datasheets/datasheet-african-american- admixture.pdf. Retrieved January 11, 2011.