Characterization of an OmpA-like outer membrane protein of the acidophilic iron-oxidizing bacterium, Acidithiobacillus ferrooxidans

Extremophiles

Volumn 15, Issue 3, 2011, Pages 403-410

  Manchur, Mohammed Abul ^a,b   Kikumoto, Mei ^a   Kanao, Tadayoshi ^a   Takada, Jun ^a   Kamimura, Kazuo ^a  

^a OKAYAMA UNIVERSITY   (Japan)

^b UNIVERSITY OF CHITTAGONG   (Bangladesh)

Author keywords

Acidithiobacillus ferrooxidans; Acidophile; Iron oxidizing bacterium; OmpA; Outer membrane protein

Indexed keywords

IRON; OMPA OUTER MEMBRANE PROTEINS; OUTER MEMBRANE PROTEIN; PEPTIDOGLYCAN; RECOMBINANT PROTEIN;

ACIDITHIOBACILLUS; ARTICLE; CHEMISTRY; CLASSIFICATION; GENETICS; HEAT; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR CLONING; MOLECULAR WEIGHT; OXIDATION REDUCTION REACTION; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN STABILITY; WESTERN BLOTTING;

ACIDITHIOBACILLUS; BACTERIAL OUTER MEMBRANE PROTEINS; BLOTTING, WESTERN; CLONING, MOLECULAR; ELECTROPHORESIS, POLYACRYLAMIDE GEL; HOT TEMPERATURE; IRON; MOLECULAR WEIGHT; OXIDATION-REDUCTION; PEPTIDOGLYCAN; PROTEIN STABILITY; RECOMBINANT PROTEINS;

ACIDITHIOBACILLUS FERROOXIDANS; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 79955523356     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-011-0371-6     Document Type: Article

References (28)

1. Achouak W, Heulin T, Pages JM (2001) Multiple facets of bacterial porins. FEMS Microbiol Lett 99: 1-7.
2. Bouveret E, Bénédetti H, Rigal A, Loret E, Lazdunski C (1999) In vitro characterization of peptidoglycan-associated lipoprotein (PAL)-peptidoglycan and PAL-TolB interactions. J Bacteriol 181: 6306-6311.
3. 2-reducing supercomplex spanning both inner and outer membranes, isolated from the extreme acidophile Acidithiobacillus ferrooxidans. J Biol Chem 283: 25803-25811.
4. Fjellbirkeland A, Kleivdal H, Joergensen C, Thestrup H, Jensen HB (1997) Outer membrane proteins of Methylococcus capsulatus (Bath). Arch Microbiol 168: 128-135.
5. Grizot S, Buchanan SK (2004) Structure of OmpA-like domain of RmpM from Neisseria meningitides. Mol Microbiol 51: 1027-1037.
6. Guiliani N, Jerez CA (2000) Molecular cloning, sequencing, and expression of omp-40, the gene coding for the major outer membrane protein from the acidophilic bacterium Thiobacillus ferrooxidans. Appl Environ Microbiol 66: 2318-2324.
7. Heller KB (1978) Apparent molecular mass of a heat modifiable protein from the outer membrane of Escherichia coli in gels with different acrylamide concentration. J Bacteriol 134: 1181-1182.
8. Jap BK, Walian PJ (1996) Structure and functional mechanism of porins. Physiol Rev 76: 1073-1088.
9. Kamimura K, Yamakado M, Shishikado T, Sugio T (2004) Analysis of salt-induced outer membrane proteins in Acidithiobacillus ferrooxidans NASF-1. In: Tsezos M, Hatzikioseyian A, Remoundaki E (eds) Biohydrometallurgy, a sustainable technology in evolution part II. Symposium proceedings. Proceedings of the 15th international biohydrometallurgy symposium IBS 2003. Athens, Greece, pp 1261-1269.
10. Kanao T, Kamimura K, Sugio T (2007) Identification of a gene encoding a tetrathionate hydrolase in Acidithiobacillus ferrooxidans. J Biotechnol 132: 16-22.
11. Klugman KP, Gotschlich EC, Blake MS (1989) Sequence of the structural gene (rmpM) for the class 4 outer membrane protein of Neisseria meningitidis, homology of the protein to Gonococcal protein III and Escherichia coli PmpA, and construction of Meningococcal strains that lack class 4 protein. Infect Immun 57: 2066-2071.
12. Koebnik R, Locher KR, van Gelder P (2000) Structure and function of bacterial outer membrane proteins: barrels in a nutshell. Mol Microbiol 37: 239-253.
13. Morona R, Klose M, Nenning U (1984) Escherichia coli K-12 outer membrane protein (OmpA) as a bacteriophage receptor: analysis of mutant genes expressing altered proteins. J Bacteriol 159: 570-578.
14. Nagano K, Read EK, Murakami Y, Masuda T, Noguchi T, Yosimura F (2005) Trimeric structure of major outer membrane proteins homologous to OmpA in Porphyromonas gingivalis. J Bacteriol 167: 902-911.
15. Nikaido H (2003) Molecular basis of bacterial outer membrane permeability revisited. Microbiol Mol Biol Rev 67: 593-656.
16. Rawlings DE (2002) Heavy metal mining using microbes. Annu Rev Microbiol 56: 65-91.
17. Rodriguez M, Campos S, Gomez-Silva B (1986) Studies on native strains of Thiobacillus ferrooxidans. III. Studies on the outer membrane of Thiobacillus ferrooxidans. Characterization of the lipopolysaccharide and some proteins. Biotechnol Appl Biochem 8: 292-299.
18. Rohwerder T, Gehrke T, Kinzler K, Sand W (2003) Bioleaching review part A: progress in bioleaching: fundamentals and mechanism of bacterial metal sulfide oxidation. Appl Microbiol Biotechnol 63: 239-248.
19. Schulz GE (2002) The structure of bacterial outer membrane proteins. Biochim Biophys Acta 1565: 308-317.
20. Shirai A, Matsuyama A, Yashiroda Y, Hashimoto A, Kawamura Y, Arai R, Komatsu Y, Horinouchi S, Yoshida M (2008) Global analysis of gel mobility of proteins and its use in target identification. J Biol Chem 283: 10745-10752.
21. Silva M, Ferreira A, Rodriguez M, Wolff D (1992) The major Thiobacillus ferrooxidans outer membrane protein forms low conductance ion channels in planar lipid bilayers. FEBS Lett 296: 169-173.
22. Smith SGJ, Mahon V, Lambert MA, Fagan RP (2007) A molecular swiss army knife: OmpA structure, function and expression. FEMS Microbial Lett 273: 1-11.
23. Sonntag I, Schwartz H, Hirota Y, Henning U (1978) Cell envelope and cell shape of Escherichia coli: multiple mutants missing the outer membrane lipoprotein and other major outer membrane proteins. J Bacteriol 136: 280-285.
24. Sugawara E, Nikaido H (1994) OmpA protein of Escherichia coli outer membrane occurs in open and closed channel forms. J Biol Chem 269: 17981-17987.
25. Wakai S, Kikumoto M, Kanao T, Kamimura K (2004) Involvement of sulfide: quinone oxidoreductase in sulfur oxidation of an acidophilic iron-oxidizing bacterium, Acidithiobacillus ferrooxidans NASF-1. Biosci Biotechnol Biochem 68: 2519-2528.
26. Wakai S, Tsujita M, Kikumoto M, Manchur MA, Kanao T, Kamimura K (2007) Purification and characterization of sulfide: quinone oxidoreductase from an acidophilic iron-oxidizing bacterium, Acidithiobacillus ferrooxidans. Biosci Biotechnol Biochem 71: 2735-2742.
27. Yarzábal A, Brasseur G, Ratouchniak J, Lund K, Lemesle-Meunier D, DeMoss JA, Bonnefoy V (2002) The high-molecular-weight cytochrome c Cyc2 of Acidithiobacillus ferrooxidans is an outer membrane protein. J Bacteriol 814: 313-317.
28. Yarzábal A, Appia-Ayme C, Ratouchniak J, Bonnefoy V (2004) Regulation of the expression of the Acidithiobacillus ferrooxidans rus operon encoding two cytochrome c, a cytochrome oxidase and rusticyanin. Microbiology 150: 2113-2123.