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BMC Research Notes

Volumn 4, Issue , 2011, Pages

Analysis of quality raw data of second generation sequencers with Quality Assessment Software

(6) Ramos, Rommel Tj a Carneiro, Adriana R a Baumbach, Jan c Azevedo, Vasco b Schneider, Maria Pc a Silva, Artur a

a FEDERAL UNIVERSITY OF PARÁ (Brazil)

b FEDERAL UNIVERSITY OF MINAS GERAIS (Brazil)

c BIELEFELD UNIVERSITY (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 79955078346 PISSN: None EISSN: 17560500 Source Type: Journal
DOI: 10.1186/1756-0500-4-130 Document Type: Review

Times cited : (19)

References (17)

1
- 76949092676
- Taming the Next-gen Beast
- 10.1038/nrmicro2322. 20157335
- Taming the Next-gen Beast. S Bentley, Nature Reviews Microbiology 2010 8 161 10.1038/nrmicro2322 20157335
- (2010) Nature Reviews Microbiology , vol.8 , pp. 161
- Bentley, S.¹

2
- 37749031255
- Next-generation sequencing transform today's biology
- 10.1038/nmeth1156
- Next-generation sequencing transform today's biology. SC Schuster, Nat Method 2008 5 16 18 10.1038/nmeth1156
- (2008) Nat Method , vol.5 , pp. 16-18
- Schuster, S.C.¹

3
- 43149115851
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- DOI 10.1101/gr.074492.107
- Algorithms for de novo short read assembly using de Bruijn graphs. DR Zerbino E Birney, Genome Research 2008 18 821 829 10.1101/gr.074492.107 18349386 (Pubitemid 351645072)
- (2008) Genome Research , vol.18 , Issue.5 , pp. 821-829
- Zerbino, D.R.¹ Birney, E.²

4
- 43149085041
- De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer
- DOI 10.1101/gr.072033.107
- De Novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer. D Hernandez P Francois L Farinelli M Osteras J Schrenzel, Genome Research 2008 18 802 809 10.1101/gr.072033.107 18332092 (Pubitemid 351645070)
- (2008) Genome Research , vol.18 , Issue.5 , pp. 802-809
- Hernandez, D.¹ Francois, P.² Farinelli, L.³ Osteras, M.⁴ Schrenzel, J.⁵

5
- 35948929094
- SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing
- DOI 10.1101/gr.6435207
- SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing. J Dohm C Lottaz T Borodina H Himmelbaurer, Genome Research 2007 17 1697 1706 10.1101/gr.6435207 17908823 (Pubitemid 350074864)
- (2007) Genome Research , vol.17 , Issue.11 , pp. 1697-1706
- Dohm, J.C.¹ Lottaz, C.² Borodina, T.³ Himmelbauer, H.⁴

6
- 36448948250
- Extending assembly of short DNA sequences to handle error
- DOI 10.1093/bioinformatics/btm451
- Extending assembly of short DNA sequences to handle error. W Jeck J Reinhardt D Baltrus M Hickenbotham V Magrini E Mardis J Dangl C Jones, BMC Bioinformatics 2007 23 2942 2944 (Pubitemid 350162901)
- (2007) Bioinformatics , vol.23 , Issue.21 , pp. 2942-2944
- Jeck, W.R.¹ Reinhardt, J.A.² Baltrus, D.A.³ Hickenbotham, M.T.⁴ Magrini, V.⁵ Mardis, E.R.⁶ Dangl, J.L.⁷ Jones, C.D.⁸

7
- 43149086380
- ALLPATHS: De novo assembly of whole-genome shotgun microreads
- DOI 10.1101/gr.7337908
- ALLPATHS: De novo assembly of whole-genome shotgun microreads. J Butler L MacCallum M Kleber I Shlyakhter M Belmonte E Lander C Nusbaum D Jaffe, Genome Research 2008 18 810 820 10.1101/gr.7337908 18340039 (Pubitemid 351645071)
- (2008) Genome Research , vol.18 , Issue.5 , pp. 810-820
- Butler, J.¹ MacCallum, I.² Kleber, M.³ Shlyakhter, I.A.⁴ Belmonte, M.K.⁵ Lander, E.S.⁶ Nusbaum, C.⁷ Jaffe, D.B.⁸

8
- 39049156065
- Short read fragment assembly of bacterial genomes
- DOI 10.1101/gr.7088808
- Short read fragment assembly of bacterial genomes. M Chaisson P Pevzner, Genome Research 2008 18 324 330 10.1101/gr.7088808 18083777 (Pubitemid 351240742)
- (2008) Genome Research , vol.18 , Issue.2 , pp. 324-330
- Chaisson, M.J.¹ Pevzner, P.A.²

9
- 62549098185
- QSRA - A quality-value guided de novo short read assembler
- 10.1186/1471-2105-10-69. 19239711
- QSRA - a quality-value guided de novo short read assembler. DW Bryant W-K Wong TC Mockler, BMC Bioinformatics 2009 10 69 10.1186/1471-2105-10-69 19239711
- (2009) BMC Bioinformatics , vol.10 , pp. 69
- Bryant, D.W.¹ Wong, W.-K.² Mockler, T.C.³

10
- 0031955518
- Base-calling of automated sequencer traces using phred. I. Accuracy assessment
- Base-Calling of Automated Sequencer Traces Phred. I. Using Accuracy Assessment. B Ewing L Hillier M Wendl P Green, Genome Research 1998 8 175 185 9521921 (Pubitemid 28177229)
- (1998) Genome Research , vol.8 , Issue.3 , pp. 175-185
- Ewing, B.¹ Hillier, L.² Wendl, M.C.³ Green, P.⁴

11
- 41249096306
- Using quality scores and longer reads improves accuracy of Solexa read mapping
- 10.1186/1471-2105-9-128. 18307793
- Using quality scores and longer reads improves accuracy of Solexa read mapping. A Smith Z Xuan M Zhang, BMC Bioinformatics 2008 9 128 10.1186/1471-2105-9-128 18307793
- (2008) BMC Bioinformatics , vol.9 , pp. 128
- Smith, A.¹ Xuan, Z.² Zhang, M.³

12
- 84889495087
- Applied SOLiD System: Ligation-Based Sequencing
- Berlin: Wiley Janitz M 1
- Applied SOLiD System: Ligation-Based Sequencing. V Pandey R Nutter E Prediger, Next Generation Genome Sequencing: Towards Personalized Medicine Berlin: Wiley, Janitz M, 1 2008 1 29 41
- (2008) Next Generation Genome Sequencing: Towards Personalized Medicine , vol.1 , pp. 29-41
- Pandey, V.¹ Nutter, R.² Prediger, E.³

13
- 0023988195
- Genomic mapping by fingerprinting random clones: A mathematical analysis
- 10.1016/0888-7543(88)90007-9. 3294162
- Genomic mapping by fingerprinting random clones: A mathematical analysis. E Lande M Waterman, Genomics 1988 2 231 239 10.1016/0888-7543(88)90007-9 3294162
- (1988) Genomics , vol.2 , pp. 231-239
- Lande, E.¹ Waterman, M.²

14
- 0031978181
- Base-calling of automated sequencer traces using phred. II. Error probabilities
- Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities. B Ewing P Green, BMC Bioinformatics 1998 8 186 194 (Pubitemid 28177230)
- (1998) Genome Research , vol.8 , Issue.3 , pp. 186-194
- Ewing, B.¹ Green, P.²

15
- 79958071418
- SOLiD Sequencing and 2-Base Encoding. http://www3.appliedbiosystems.com/ cms/groups/mcb-marketing/documents/general documents/cms-057810.pdf
- SOLiD Sequencing and 2-Base Encoding

16
- 0031955116
- A graphical tool for sequence finishing
- 9521923
- A graphical tool for sequence finishing. D Gordon A C G P, Genome Research 1998 8 195 202 9521923
- (1998) Genome Research , vol.8 , pp. 195-202
- Gordon, D.¹ C, A.² P, G.³

17
- 77957272611
- A survey of sequence alignment algorithms for next-generation sequencing
- 10.1093/bib/bbp046
- A survey of sequence alignment algorithms for next-generation sequencing. H Li N Homer, Briefings Bioinformatics 2010 11 181 197 10.1093/bib/bbp046
- (2010) Briefings Bioinformatics , vol.11 , pp. 181-197
- Li, H.¹ Homer, N.²

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.