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Volumn 28, Issue 5, 2011, Pages 349-361

Comprehensive phenotypic analysis of single-gene deletion and overexpression strains of Saccharomyces cerevisiae

Author keywords

Growth rate; Yeast; Yeast deletion collection; Yeast overexpression collection

Indexed keywords

ARTICLE; CLASSIFICATION; FUNGAL STRAIN; FUNGUS CULTURE; FUNGUS GROWTH; GENE DELETION; GENE FUNCTION; GENE IDENTIFICATION; GENE ISOLATION; GENE OVEREXPRESSION; GENETIC MANIPULATION; GENOME ANALYSIS; GROWTH RATE; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; SACCHAROMYCES CEREVISIAE; TECHNIQUE;

EID: 79954882400     PISSN: 0749503X     EISSN: 10970061     Source Type: Journal    
DOI: 10.1002/yea.1843     Document Type: Article
Times cited : (103)

References (36)
  • 1
    • 0030999051 scopus 로고    scopus 로고
    • Screening and identification of yeast sequences that cause growth inhibition when overexpressed
    • Akada R, Yamamoto J, Yamashita I. 1997. Screening and identification of yeast sequences that cause growth inhibition when overexpressed. Mol Gen Genet 254: 267-274.
    • (1997) Mol Gen Genet , vol.254 , pp. 267-274
    • Akada, R.1    Yamamoto, J.2    Yamashita, I.3
  • 3
    • 0026012220 scopus 로고
    • Aromatic amino acid biosynthesis in the yeast Saccharomyces cerevisiae: a model system for the regulation of a eukaryotic biosynthetic pathway
    • Braus GH. 1991. Aromatic amino acid biosynthesis in the yeast Saccharomyces cerevisiae: a model system for the regulation of a eukaryotic biosynthetic pathway. Microbiol Rev 55: 349-370.
    • (1991) Microbiol Rev , vol.55 , pp. 349-370
    • Braus, G.H.1
  • 4
    • 0032784543 scopus 로고    scopus 로고
    • Food fermentations: role of microorganisms in food production and preservation
    • Caplice E, Fitzgerald GF. 1999. Food fermentations: role of microorganisms in food production and preservation. Int J Food Microbiol 50: 131-149.
    • (1999) Int J Food Microbiol , vol.50 , pp. 131-149
    • Caplice, E.1    Fitzgerald, G.F.2
  • 5
    • 0026714724 scopus 로고
    • SDH1, the gene encoding the succinate dehydrogenase flavoprotein subunit from Saccharomyces cerevisiae
    • Chapman KB, Solomon SD, Boeke JD. 1992. SDH1, the gene encoding the succinate dehydrogenase flavoprotein subunit from Saccharomyces cerevisiae. Gene 118: 131-136.
    • (1992) Gene , vol.118 , pp. 131-136
    • Chapman, K.B.1    Solomon, S.D.2    Boeke, J.D.3
  • 6
    • 0034329461 scopus 로고    scopus 로고
    • A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae
    • Chávez S, Beilharz T, Rondón AG, et al. 2000. A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae. EMBO J 19: 5824-5834.
    • (2000) EMBO J , vol.19 , pp. 5824-5834
    • Chávez, S.1    Beilharz, T.2    Rondón, A.G.3
  • 7
    • 0015632377 scopus 로고
    • S-adenosyl methionine-mediated repression of methionine biosynthetic enzymes in Saccharomyces cerevisiae
    • Cherest H, Surdin-Kerjan Y, Antoniewski J, Robichon-Szulmajster H. 1973. S-adenosyl methionine-mediated repression of methionine biosynthetic enzymes in Saccharomyces cerevisiae. J Bacteriol 114: 928-933.
    • (1973) J Bacteriol , vol.114 , pp. 928-933
    • Cherest, H.1    Surdin-Kerjan, Y.2    Antoniewski, J.3    Robichon-Szulmajster, H.4
  • 8
    • 0346672411 scopus 로고    scopus 로고
    • Duplicate genes and robustness to transient gene knock-downs in Caenorhabditis elegans
    • Conant GC, Wagner A. 2004. Duplicate genes and robustness to transient gene knock-downs in Caenorhabditis elegans. Proc Biol Sci 271: 89-96.
    • (2004) Proc Biol Sci , vol.271 , pp. 89-96
    • Conant, G.C.1    Wagner, A.2
  • 9
    • 0033118923 scopus 로고    scopus 로고
    • In Saccharomyces cerevisae, feedback inhibition of homocitrate synthase isoenzymes by lysine modulates the activation of LYS gene expression by Lys14p
    • Feller A, Ramos F, Piérard A, Dubois E. 1999. In Saccharomyces cerevisae, feedback inhibition of homocitrate synthase isoenzymes by lysine modulates the activation of LYS gene expression by Lys14p. Eur J Biochem 261: 163-170.
    • (1999) Eur J Biochem , vol.261 , pp. 163-170
    • Feller, A.1    Ramos, F.2    Piérard, A.3    Dubois, E.4
  • 10
    • 0034724683 scopus 로고    scopus 로고
    • The Elp2 subunit of elongator and elongating RNA polymerase II holoenzyme is a WD40 repeat protein
    • Fellows J, Erdjument-Bromage H, Tempst P, Svejstrup JQ. 2000. The Elp2 subunit of elongator and elongating RNA polymerase II holoenzyme is a WD40 repeat protein. J Biol Chem 275: 12896-12899.
    • (2000) J Biol Chem , vol.275 , pp. 12896-12899
    • Fellows, J.1    Erdjument-Bromage, H.2    Tempst, P.3    Svejstrup, J.Q.4
  • 11
    • 27744505616 scopus 로고    scopus 로고
    • Glycerophospho-choline-dependent growth requires Gde1p (YPL110c) and Git1p in Saccharomyces cerevisiae
    • Fisher E, Almaguer C, Holic R, et al. 2005. Glycerophospho-choline-dependent growth requires Gde1p (YPL110c) and Git1p in Saccharomyces cerevisiae. J Biol Chem 280(43): 36110-36117.
    • (2005) J Biol Chem , vol.280 , Issue.43 , pp. 36110-36117
    • Fisher, E.1    Almaguer, C.2    Holic, R.3
  • 12
    • 0036428536 scopus 로고    scopus 로고
    • Tag-mediated isolation of yeast mitochondrial ribosome and mass spectrometric identification of its new components
    • Gan X, Kitakawa M, Yoshino K, et al. 2002. Tag-mediated isolation of yeast mitochondrial ribosome and mass spectrometric identification of its new components. Eur J Biochem 69: 5203-5214.
    • (2002) Eur J Biochem , vol.69 , pp. 5203-5214
    • Gan, X.1    Kitakawa, M.2    Yoshino, K.3
  • 13
    • 28444478789 scopus 로고    scopus 로고
    • Biochemical and genetic analysis of the yeast proteome with a movable ORF collection
    • Gelperin DM, White MA, Wilkinson ML, et al. 2005. Biochemical and genetic analysis of the yeast proteome with a movable ORF collection. Genes Dev 19: 2816-2826.
    • (2005) Genes Dev , vol.19 , pp. 2816-2826
    • Gelperin, D.M.1    White, M.A.2    Wilkinson, M.L.3
  • 14
    • 0037173615 scopus 로고    scopus 로고
    • Functional profiling of the Saccharomyces cerevisiae genome
    • Giaever G, Chu AM, Ni L, et al. 2002. Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896): 387-391.
    • (2002) Nature , vol.418 , Issue.6896 , pp. 387-391
    • Giaever, G.1    Chu, A.M.2    Ni, L.3
  • 15
    • 0347033256 scopus 로고    scopus 로고
    • Role of duplicate genes in genetic robustness against null mutations
    • Gu Z, Steinmetz LM, Gu X, et al. 2003. Role of duplicate genes in genetic robustness against null mutations. Nature 421: 63-66.
    • (2003) Nature , vol.421 , pp. 63-66
    • Gu, Z.1    Steinmetz, L.M.2    Gu, X.3
  • 16
    • 33746655320 scopus 로고    scopus 로고
    • Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels
    • Hill J, Nelson E, Timan D, et al. 2006. Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels. Proc Natl Acad Sci USA 103: 11206-11210.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 11206-11210
    • Hill, J.1    Nelson, E.2    Timan, D.3
  • 17
    • 1942452749 scopus 로고    scopus 로고
    • Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
    • Kellis M, Birren BW, Lander ES. 2004. Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae. Nature 428: 617-624.
    • (2004) Nature , vol.428 , pp. 617-624
    • Kellis, M.1    Birren, B.W.2    Lander, E.S.3
  • 19
    • 0031983739 scopus 로고    scopus 로고
    • Glucose control in Saccharomyces cerevisiae: the role of Mig1 in metabolic functions
    • Klein CJ, Olsson L, Nielsen J. 1998. Glucose control in Saccharomyces cerevisiae: the role of Mig1 in metabolic functions. Microbiology 144: 13-24.
    • (1998) Microbiology , vol.144 , pp. 13-24
    • Klein, C.J.1    Olsson, L.2    Nielsen, J.3
  • 20
    • 0033061106 scopus 로고    scopus 로고
    • Investigation of the impact of MIG1 and MIG2 on the physiology of Saccharomyces cerevisiae
    • Klein CJ, Rasmussen JJ, Rønnow B, et al. 1999. Investigation of the impact of MIG1 and MIG2 on the physiology of Saccharomyces cerevisiae. J Biotechnol 68: 197-212.
    • (1999) J Biotechnol , vol.68 , pp. 197-212
    • Klein, C.J.1    Rasmussen, J.J.2    Rønnow, B.3
  • 21
    • 67650841319 scopus 로고    scopus 로고
    • Robustness and fragility in the yeast high osmolarity glycerol, HOG, signal-transduction pathway
    • Krantz M, Ahmadpour D, Ottosson LG, et al. 2009. Robustness and fragility in the yeast high osmolarity glycerol, HOG, signal-transduction pathway. Mol Syst Biol 5: 281.
    • (2009) Mol Syst Biol , vol.5 , pp. 281
    • Krantz, M.1    Ahmadpour, D.2    Ottosson, L.G.3
  • 22
    • 28344455644 scopus 로고    scopus 로고
    • Biotechnological production of amino acids and derivatives: current status and prospects
    • Leuchtenberger W, Huthmacher K, Drauz K. 2005. Biotechnological production of amino acids and derivatives: current status and prospects. Appl Microbiol Biotechnol 69: 1-8.
    • (2005) Appl Microbiol Biotechnol , vol.69 , pp. 1-8
    • Leuchtenberger, W.1    Huthmacher, K.2    Drauz, K.3
  • 23
    • 0033046562 scopus 로고    scopus 로고
    • Metabolic engineering of poly(3-hydroxyalkanoates): from DNA to plastic
    • Madison LL, Huisman GW. 1999. Metabolic engineering of poly(3-hydroxyalkanoates): from DNA to plastic. Microbiol Mol Biol Rev 63: 21-53.
    • (1999) Microbiol Mol Biol Rev , vol.63 , pp. 21-53
    • Madison, L.L.1    Huisman, G.W.2
  • 24
    • 48249134039 scopus 로고    scopus 로고
    • Mechanisms of cell cycle control revealed by a systematic and quantitative overexpression screen in S. cerevisiae
    • Niu W, Li Z, Zhan W, et al. 2008. Mechanisms of cell cycle control revealed by a systematic and quantitative overexpression screen in S. cerevisiae. PLoS Genet 4: e1000120.
    • (2008) PLoS Genet , vol.4
    • Niu, W.1    Li, Z.2    Zhan, W.3
  • 25
    • 33746635479 scopus 로고    scopus 로고
    • Phenotypic effects of membrane protein overexpression in Saccharomyces cerevisiae
    • Osterberg M, Kim H, Warringer J, et al. 2006. Phenotypic effects of membrane protein overexpression in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 103: 11148-11153.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 11148-11153
    • Osterberg, M.1    Kim, H.2    Warringer, J.3
  • 26
    • 0032971711 scopus 로고    scopus 로고
    • Elongator, a multisubunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation
    • Otero G, Fellows J, Li Y, et al. 1999. Elongator, a multisubunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation. Mol Cell 3: 109-118.
    • (1999) Mol Cell , vol.3 , pp. 109-118
    • Otero, G.1    Fellows, J.2    Li, Y.3
  • 27
    • 0037415686 scopus 로고    scopus 로고
    • Molecular evidence for a positive role of Spt4 in transcription elongation
    • Rondon AG, García-Rubio M, González-Barrera S, Aguilera A. 2003. Molecular evidence for a positive role of Spt4 in transcription elongation. EMBO J 22: 612-620.
    • (2003) EMBO J , vol.22 , pp. 612-620
    • Rondon, A.G.1    García-Rubio, M.2    González-Barrera, S.3    Aguilera, A.4
  • 28
    • 9144257282 scopus 로고    scopus 로고
    • The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes
    • Ruepp A, Zollner A, Maier D, et al. 2004. The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes. Nucleic Acids Res 32: 5539-5545.
    • (2004) Nucleic Acids Res , vol.32 , pp. 5539-5545
    • Ruepp, A.1    Zollner, A.2    Maier, D.3
  • 29
    • 31544482407 scopus 로고    scopus 로고
    • Mapping pathways and phenotypes by systematic gene overexpression
    • Sopko R, Huang D, Preston N, et al. 2006. Mapping pathways and phenotypes by systematic gene overexpression. Mol Cell 21: 319-330.
    • (2006) Mol Cell , vol.21 , pp. 319-330
    • Sopko, R.1    Huang, D.2    Preston, N.3
  • 31
    • 0028281964 scopus 로고
    • Cloning and characterization of a yeast cytochrome b5-encoding gene which suppresses ketoconazole hypersensitivity in a NADPH-P-450 reductase-deficient strain
    • Truan G, Epinat JC, Rougeulle C, et al. 1994. Cloning and characterization of a yeast cytochrome b5-encoding gene which suppresses ketoconazole hypersensitivity in a NADPH-P-450 reductase-deficient strain. Gene 142: 123-127.
    • (1994) Gene , vol.142 , pp. 123-127
    • Truan, G.1    Epinat, J.C.2    Rougeulle, C.3
  • 32
    • 0033229970 scopus 로고    scopus 로고
    • The economics of ribosome biosynthesis in yeast
    • Warner JR. 1999. The economics of ribosome biosynthesis in yeast. Trends Biochem Sci 24: 437-440.
    • (1999) Trends Biochem Sci , vol.24 , pp. 437-440
    • Warner, J.R.1
  • 33
    • 0347994900 scopus 로고    scopus 로고
    • High-resolution yeast phenomics resolves different physiological features in the saline response
    • Warringer J, Ericson E, Fernandez L, et al. 2003. High-resolution yeast phenomics resolves different physiological features in the saline response. Proc Natl Acad Sci USA 100: 15724-15729.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 15724-15729
    • Warringer, J.1    Ericson, E.2    Fernandez, L.3
  • 34
    • 0035980015 scopus 로고    scopus 로고
    • RNA polymerase II elongator holoenzyme is composed of two discrete subcomplexes
    • Winkler GS, Petrakis TG, Ethelberg S, et al. 2001. RNA polymerase II elongator holoenzyme is composed of two discrete subcomplexes. J Biol Chem 276: 32743-32749.
    • (2001) J Biol Chem , vol.276 , pp. 32743-32749
    • Winkler, G.S.1    Petrakis, T.G.2    Ethelberg, S.3
  • 35
    • 0033529707 scopus 로고    scopus 로고
    • Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis
    • Winzeler EA, Shoemaker DD, Astromoff A, et al. 1999. Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science 285: 901-906.
    • (1999) Science , vol.285 , pp. 901-906
    • Winzeler, E.A.1    Shoemaker, D.D.2    Astromoff, A.3
  • 36
    • 0033166761 scopus 로고    scopus 로고
    • A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme
    • Wittschieben BO, Otero G, de Bizemont, T, et al. 1999. A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme. Mol Cell 4: 123-128.
    • (1999) Mol Cell , vol.4 , pp. 123-128
    • Wittschieben, B.O.1    Otero, G.2    de Bizemont, T.3


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