Phylogeographical history of the white seabream Diplodus sargus (Sparidae): Implications for insularity

Marine Biology Research

Volumn 7, Issue 3, 2011, Pages 250-260

  González Wangüemert, Mercedes ^a,b   Froufe, Elsa ^c   Pérez Ruzafa, Angel ^d   Alexandrino, Paulo ^a  

^a CENTRO DE INVESTIGAÇÃO EM BIODIVERSIDADE E RECURSOS GENÉTICOS   (Portugal)

^b UNIVERSITY OF ALGARVE   (Portugal)

^c UNIVERSITY OF PORTO   (Portugal)

^d UNIVERSITY OF MURCIA   (Spain)

Author keywords

Connectivity; Fishes; Islands; mtDNA; Phylogeography; Population structure

Indexed keywords

CONNECTIVITY; CONTINENTAL SLOPE; CYTOCHROME; DEMOGRAPHY; GENE FLOW; GENETIC DIFFERENTIATION; GENETIC MARKER; GLACIATION; ISLAND BIOGEOGRAPHY; ISOLATED POPULATION; MITOCHONDRIAL DNA; PERCIFORM; PHYLOGEOGRAPHY;

ATLANTIC OCEAN; AZORES; CANARY ISLANDS; MEDITERRANEAN SEA; PORTUGAL; SPAIN;

EID: 79954610912     PISSN: 17451000     EISSN: 17451019     Source Type: Journal    
DOI: 10.1080/17451000.2010.499438     Document Type: Article

References (65)

1. Aboim MA, Menezes GM, Schlitt T, Rogers D. 2005. Genetic structure and history of populations of the deep-sea fish Helicolenus dactylopterus (Delaroche, 1809) inferred from mtDNA sequence analysis. Molecular Ecology 14:1343-54.
2. Adams J, Maslin M, Thomas E. 1999. Sudden climate transitions during the Quaternary. Progress in Physic Geography 23:1-36.
3. Alhammoud B, Béranger K, Mortier L, Crépon M, Dekeyser I. 2004. Surface circulation of the Levantine Basin: Comparison of model results with observations. Progress in Oceanography 66:299-320.
4. Bargelloni L, Alarcón JA, Álvarez MC, Penzo E, Magoulas A, Palma J, et al. 2005. The Atlantic-Mediterranean transition: Discordant genetic patterns in two seabream species, Diplodus puntazzo (Cetti) and Diplodus sargus (L.). Molecular Phylogentics and Evolution 36:523-35.
5. Bargelloni L, Alarcón JA, Álvarez MC, Penzo E, Magoulas A, Reis C, et al. 2003. Discord in the family Sparidae (Teleostei): Divergent phylogeographical patterns across the Atlantic-Mediterranean divide. Journal of Evolutionary Biology 16:1149-58.
6. Barton ED, Aristegui J, Tett P, Cantón M, García-Braun J, Hernández-León S, et al. 1998. The transition zone of the Canary Current upwelling region. Progress in Oceanography 41:455-504.
7. Bauchot ML, Hureau JC. 1990. Sparidae. In: Whitehead PJP, Bauchot ML, Hureau JC, Nielsen J, Tortuese, editors. Fishes of the North-Eastern Atlantic and Mediterranean. Paris: UNESCO, p 883-907.
8. Baus E, Darrock DJ, Bruford MW. 2005. Gene-flow patterns in Atlantic and Mediterranean populations of the Lusitanian sea star Asterina gibossa. Molecular Ecology 14:3373-82.
9. Belkhir K, Borsa P, Goudet J, Chicki L, Bonhomme F. 1996-2004. GENETIX 4.05, logiciel sous WindowsTM pour la génetique des populations. Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, Université de Montpellier II, Montpellier (France). Computer program. Available on http://www.univ-montp2.fr/genetix/genetix/ genetix.htm.
10. Briggs JC. 1974. Marine Zoogeography. New York, NY: McGraw-Hill Press.
11. Briggs JC. 1996. Global Biogeography. Developments in Paleontology and Stratigraphy. Vol. 14. Amsterdam: Elsevier.
12. Cardinale M, Arrhenius F. 2000. The influence of stock structure and environmental conditions on the recruitment process of Baltic cod estimated using a generalized additive model. Canadian Journal of Fisheries and Aquatic Science 57:2402-09.
13. Comesaña AS, Martínez-Areal MT, Sanjuán A. 2008. Genetic variation in the mitochondrial DNA control region among horse mackerel (Trachurus trachurus) from the Atlantic and Mediterranean areas. Fisheries Research 89:122-31.
14. Costagliola D, Robertson DR, Guidetti P, Stefanni S, Wirtz P, Heiser JB, et al. 2004. Evolution of coral reef fish Thalassoma pavo spp. (Labridae). 2. Evolution of the eastern Atlantic species. Marine Biology 144:377-83.
15. Crowley TJ. 1981. Temperature and circulation changes in the eastern north Atlantic during the last 150,000 years: Evidence from the planktonic foraminiferal record. Marine Micropaleontology 6:97-129.
16. Domingues V, Santos R, Brito A, Alexandrou M, Almada V. 2007. Mitochondrial and nuclear markers reveal isolation by distance and effects of Pleistocene glaciations in the northeastern Atlantic and Mediterranean populations of the white seabream (Diplodus sargus, L.). Journal of Experimental Marine Biology and Ecology 346:102-13.
17. Domingues V, Santos R, Brito A, Almada V. 2006. Historical population dynamics and demography of the eastern Atlantic pomacentrid Chromis limbata (Valenciennes, 1833). Molecular Phylogenetics and Evolution 40:139-47.
18. Durán S, Palacín C, Becerro MA, Turón X, Giribert G. 2004. Genetic diversity and population structure of the comercially harvested sea urchin Paracentrotus lividus (Echinodermata, Echinoidea). Molecular Ecology 13:3317-28.
19. Emerson BC. 2002. Evolution on oceanic islands: Molecular phylogenetic approaches to understanding pattern and process. Molecular Ecology 15:449-58.
20. Figuereido M, Morato T, Barreiros JP, Afonso P, Santos R. 2005. Feeding ecology of the white seabream, Diplodus sargus, and the ballan wrasse, Labrus bergylta, in the Azores. Fisheries Research 75:107-19.
21. Fu YX. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147:915-25.
22. Gibson RN. 1994. Impact of habitat quality and quantity on the recruitment of flatfishes. Netherlands Journal of Sea Research 32:191-206.
23. González-Wangüemert M, Cánovas F, Pérez-Ruzafa A, Marcos C, Alexandrino P. 2010. Connectivity patterns inferred from the genetic structure of white seabream (Diplodus sargus L.). Journal of Experimental Marine Biology and Ecology 383:23-31.
24. González-Wangüemert M, Pérez-Ruzafa Á, Cánovas F, García-Charton JA, Marcos C. 2007. Temporal genetic variation in populations of Diplodus sargus from the SW Mediterranean. Marine Ecology Progress Series 334:237-44.
25. González-Wangüemert M, Pérez-Ruzafa A, García-Charton JA, Marcos C. 2006. Genetic differentiation and gene flow of two sparidae subspecies, Diplodus sargus sargus and Diplodus sargus cadenati in Atlantic and south-west Mediterranean populations. Biological Journal of the Linnean Society 89:705-18.
26. González-Wangüemert M, Pérez-Ruzafa Á, Marcos C, García-Charton J. 2004. Genetic differentiation of Diplodus sargus (Pisces: Sparidae) populations in Southwest Mediterranean. Biological Journal of the Linnean Society 82:249-61.
27. Grant WS, Bowen BW. 1998. Shallow population histories in deep evolutionary lineages of marine fishes: Insights from sardines and anchovies and lessons for conservation. Journal of Heredity 89:415-26.
28. Guo SW, Thompson EA. 1992. Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 48:361-72.
29. Gysels ES, Hellemans B, Patarnello T, Volckaert FAM. 2004. Current and historic gene flow of the sandy goby Pomatochistus minutus on the European Continental Shelf and in the Mediterranean Sea. Biological Journal of the Linnean Society 83:561-76.
30. Hall TA. 1999. BIOEDIT: A user-friendly biological sequence alignment, editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41:95-98.
31. Harmelin-Vivien ML, Harmelin JG, Leboulleux V. 1995. Microhabitat requirements for settlement of juvenile sparid fishes on Mediterranean rocky shores. Hydrobiologia 300/301:309-20.
32. Hudson RR. 1990. Gene genealogies and the coalescent process. In: Futuyma D, Antonovics J, editors. Oxford Surveys in Evolutionary Biology. Vol. 7. New York, NY: Oxford University Press. p 1-44.
33. Jousson O, Bartoli P, Pawlowski J. 2000. Cryptic speciation among instestinal parasites (Trematoda: Digenea) infecting sympatric host fishes (Sparidae). Journal of Evolutionary Biology 13:778-85.
34. Kocher TD, Thomas WK, Meyer A, Edwards SV, Paabo SF, Villablanca FX, et al. 1989. Dynamics of mtDNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences USA 86:6196-200.
35. Lazoski C, Solé-Cava AM, Boury-Esnault N, Klatau M, Russo CAM. 2001. Cryptic speciation in a high gene flow scenario in the oviparous marine sponge Chondrosia reniformis. Marine Biology 139:421-29.
36. Lemaire C, Versini J, Bonhomme F. 2005. Maintenance of genetic differentiation across a transition zone in the sea: Discordance between nuclear and cytoplasmatic markers. Journal of Evolutionary Biology 18:70-80.
37. Lenfant P, Planes S. 1996. Genetic differentiation of white sea bream within the Lion's Gulf and the Ligurian Sea (Mediterranean Sea). Journal of Fish Biology 49:613-21.
38. Lenfant P, Planes S. 2002. Temporal genetic changes between cohorts in a natural population of a marine fish, Diplodus sargus. Biological Journal of the Linnean Society 76:9-20.
39. Mantel N. 1967. The detection of disease clustering and generalized regression approach. Canadian Research 27:209-20.
40. Morato T, Afonso P, Lourinho P, Nash RDM, Santos S. 2003. Reproductive biology and recruitment of the white sea bream in the Azores. Journal of Fish Biology 63:59-72.
41. Pajuelo JG, Lorenzo JM. 2004. Basic characteristics of the population dynamic and state of exploitation of Moroccan white seabream Diplodus sargus cadenati (Sparidae) in the Canarian archipelago. Journal of Applied Ichthiology 20:15-21.
42. Patarnello T, Filip A, Volckaert MJ, Castilho R. 2007. Pillars of Hercules: Is the Atlantic-Mediterranean transition a phylogeographical break? Molecular Ecology 16:4426-44.
43. Pérez-Ruzafa Á, González-Wangüemert M, Lenfant P, Marcos C, García-Charton JA. 2006. Effects of fishing protection on the genetic structure of fish populations. Biological Conservation 129:244-55.
44. Piñera JA, Blanco G, Vázquez E, Sánchez JA. 2007. Genetic diversity of blackspot seabream (Pagellus bogaraveo) populations of Spanish Coasts: A preliminary study. Marine Biology 151:2153-58.
45. Pitchford JW, James A, Briendly J. 2005. Quantifying the effects of individual and environmental variability in fish recruitment. Fisheries Oceanography 14:150-60.
46. Quignard JP. 1978. La Mediterranee, creuset ichthyologique. Bolletino Zoologico 45(suppl):23-36.
47. Raymond M, Rousset F. 1995. An exact test for population differentiation. Evolution 49:1280-83.
48. Riginos C, Nachman MW. 2001. Population subdivision in marine environments: The contributions of biogeography, geographical distance and discontinuous habitat to genetic differentiation. Molecular Ecology 10:1439-53.
49. Robinson AR, Leslie WG, Theocharis A, Lascaratos A. 2001. Ocean circulation currents: Mediterranean Sea Circulation. In: Turekian KK, Thorpe SA, editors. Encyclopedia of Ocean Sciences. London: Academic Press. p 1689-706.
50. Rogers AR, Harpending H. 1992. Population growth makes waves in the distribution of pairwise differences. Molecular Biology and Evolution 9:552-59.
51. Rosecchi E. 1985. Ethologie alimentaire des sparidae, Diplodus annularis, Diplodus sargus, Diplodus vulgaris, Pagellus erythrinus, Sparus aurata du Golf du Lion et des étangs palavasiens. Thèse de doctoral, Université des Sciences et Techniques du Languedoc. 281 pages.
52. Rosecchi E. 1987. L'alimentation de Diplodus annularis, Diplodus sargus, Diplodus vulgaris, et Sparus aurata (Pisces, Sparidae) dans le Golfe du Lion et des lagunes littorales. Reveu des Travaux de l Institut des Péches Maritimes 49:125-41.
53. Rozas J, Sánchez del Barrio JC, Messeguer X, Rozas R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19:2496-97.
54. Sambrook E, Fritsch F, Maniatis T. 1989. Molecular Cloning. New York, NY: Cold Spring Harbour Press. 1659 pages.
55. Santos RS, Hawkins S, Monteiro LR, Alves M, Isidro EJ. 1995. Marine research, resources and conservation in the Azores. Aquatic Conservation: Marine and Freshwater Ecology 5:311-54.
56. Sá-Pinto A, Branco M, Soyanda D, Alexandrino P. 2008. Patterns of colonization, evolution and gene flow in species of the genus Patella in the Macaronesian Islands. Molecular Ecology 17:519-32.
57. Schneider S, Roessli D, Excoffier L. 2000. ARLEQUIN ver 2.000: A software for population genetics data analysis. Genetics and Biometry Laboratory. University of Geneva, Geneva. Computer Program.
58. Schönhuth S, Álvarez Y, Rico V, González JA, Santana JI, Gouveia E, et al. 2005. Molecular identification and biometric analysis of Macaronesian archipelago stocks of Berix splendens. Fisheries Research 73:299-309.
59. Stamatis C, Triantafyllidis A, Moutou K.A, Mamuris Z. 2004. Mitochondrial DNA variation in northeast Atlantic and Mediterranean populations of Norway lobster, Nephrops norvegicus. Molecular Ecology 16:1377-90.
60. Summerer M, Hanel R, Sturmbauer C. 2001. Mitochondrial phylogeny and biogeographic affinities of sea bream of the genus Diplodus (Sparidae). Journal of Fish Biology 59:1639-52.
61. Tajima F. 1989. The effect of change in population size on DNA polymorphisms. Genetics 123:597-601.
62. Turón X, Tarjuelo I, Durán S, Pascual M. 2003. Characterising invasion processes with genetic data: An Atlantic clade of Clavelina lepadiformis (Ascidiacea) introduced into Mediterranean harbours. Hydrobiologia 503:29-35.
63. Uthicke S, Benzie JAH. 2000. Allozyme electrophoresis indicates high gene flow between populations of Holothuria (Microthele) nobilis (Echinodermata: Holothuroidea) on the Great Barrier Reef. Marine Biology 137:819-25.
64. Zardoya R, Castilho R, Grande C, Favre-Krey L, Caetano S, Marcato S, et al. 2004. Differential population structuring of two closely related fish species, the mackerel (Scomber scombrus) and the chub mackerel (Scomber japonicus), in the Mediterranean Sea. Molecular Ecology 13:1785-98.
65. Zulliger DE, Tanner S, Ruch M, Ribi G. 2009. Genetic structure of the high dispersal Atlanto-Mediterreanean sea star Astropecten aranciacus revealed by mitochondrial DNA sequences and microsatellite loci. Marine Biology 156:597-610.