Generating HapMap data text reports using the genome browser

Cold Spring Harbor Protocols

Volumn 3, Issue 7, 2008, Pages

  Smith, Albert Vernon ^a  

^a NONE

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Indexed keywords

EID: 79954609565     PISSN: None     EISSN: 15596095     Source Type: Journal    
DOI: 10.1101/pdb.prot5024     Document Type: Article

References (10)

1. Barrett J.C., Fry B., Maller J., Daly M.J. 2005. HaploView: Analysis and visualization of LD and haplotype maps. Bioinformatics 21: 263-265. [Abstract/Free Full Text]
2. Hubbard T.J.P., Aken B.L., Beal K., Ballester B., Caccamo M., Chen Y., Clarke L., Coates G., Cunningham F., Cutts T. et al. 2007. Ensembl 2007. Nucleic Acids Res. 35: D610-D617. doi:10.1093/nar/gkl996. [Abstract/Free Full Text]
3. International HapMap Consortium. 2005. A haplotype map of the human genome. Nature 437: 1299-1320. [Medline]
4. Kent W.J., Sugnet C.W., Furey T.S., Roskin K.M., Pringle T.H., Zahler A.M., Haussler D. 2002. The Human Genome Browser at UCSC. Genome Res. 12: 996-1006. [Abstract/Free Full Text]
5. Smith A.V. 2008a. Browsing HapMap Data using the genome browser. CSH Protocols (this issue) doi:10.1101/pdb.prot5023. [Abstract/Free Full Text]
6. Smith A.V. 2008b. Manipulating HapMap data using HaploView. CSH Protocols (this issue) doi:10.1101/pdb.prot5025. [Abstract/Free Full Text]
7. Smith A.V. 2008c. Retrieving HapMap data using HapMart. CSH Protocols (this issue) doi:10.1101/pdb.prot5026. [Abstract/Free Full Text]
8. Smith A.V. 2008d. Retrieving HapMap data via bulk download. CSH Protocols (this issue) doi:10.1101/pdb.prot5027. [Abstract/Free Full Text]
9. Thorisson G.A., Smith A.V., Krishnan L., Stein L.D. 2005. The International HapMap Project Web site. Genome Res. 15: 1592-1593. [Abstract/Free Full Text]
10. Wheeler D.L., Barrett T., Benson D.A., Bryant S.H., Canese K., Chetvernin V., Church D.M., DiCuccio M., Edgar R., Federhen S. et al. 2007. Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 35: D5-D12. doi:10.1093/nar/gkl1031. [Abstract/Free Full Text]