Dynamics of soluble extracellular polymeric substances and transparent exopolymer particle pools in coastal ecosystems

Marine Ecology Progress Series

Volumn 427, Issue , 2011, Pages 13-27

  Klein, Cécile ^a   Claquin, Pascal ^a   Alexandrine, Pannard ^a,b   Napoléon, Camille ^a   Le Roy, Bertrand ^a   Véron, Benoît ^a  

^a UNIVERSITÉ DE CAEN   (France)

^b UNIVERSITÉ DE RENNES 1   (France)

Author keywords

Diatoms; Eastern English Channel; Environmental parameters; Soluble EPS; TEP; Transparent exopolymer particles

Indexed keywords

BIOMASS; COASTAL ZONE; DIATOM; METABOLISM; NITROGEN; OPEN OCEAN; PHYTOPLANKTON; POLYMER; RIVER DISCHARGE; TIDAL CHANNEL; TIME SERIES;

ENGLISH CHANNEL;

BACILLARIOPHYTA; BORNA DISEASE VIRUS;

EID: 79954565275     PISSN: 01718630     EISSN: None     Source Type: Journal    
DOI: 10.3354/meps09049     Document Type: Article

References (73)

1. Alldredge AL, Passow U, Logan BE (1993) The abundance and significance of a class of large transparent organic particles in the ocean. Deep-Sea Res Part I 40:1131-1140 (Pubitemid 24429273)
2. Aminot A, Chaussepied M (1983) Manuel des analyses chimiques en milieu marin. CNEXO, BNDO/Documentation, Brest, France
3. Aminot A, Kérouel R (2004) Hydrologie des écosystè mes marins. Paramètres et analyses. Ifremer, Brest
4. Aminot A, Kérouel R (2007) Dosage automatique des nutriments dans les eaux marines: méthodes en flux continu. Ifremer, Brest
5. Beauvais S, Pedrotti ML, Villa E, Lemée R (2003) Transparent exopolymer particle (TEP) dynamics in relation to trophic and hydrological conditions in the NW Mediterranean Sea. Mar Ecol Prog Ser 262:97-109 (Pubitemid 37496509)
6. Claquin P, Probert I, Lefebvre S, Veron B (2008) Effects of temperature on photosynthetic parameters and TEP production in eight species of marine microalgae. Aquat Microb Ecol 51:1-11 (Pubitemid 351785223)
7. Colombo V, Vieira AAH, Moraes G (2004) Activity of glycosidases from freshwater heterotrophic microorganisms on the degradation of extracellular polysaccharide produced by Anabaena spiroides (Cyanobacteria). Braz J Microbiol 3: 110-116 (Pubitemid 40747629)
8. Corzo A, Morillo JA, Rodríguez S (2000) Production of transparent exopolymer particles (TEP) in cultures of Chaetoceros calcitrans under nitrogen limitation. Aquat Microb Ecol 23:63-72 (Pubitemid 34235236)
9. De Brouwer JFC, Stal LJ (2002) Daily fluctuations of exopolymer in cultures of the benthic diatoms Cylindrotheca closterium and Nitzschia sp. (Bacillariophyceae). J Phycol 38: 464-472 (Pubitemid 34793768)
10. De Brouwer JFC, Wolfstein K, Stal LJ (2002) Physical characterisation and diel dynamics of different fractions of extracellular polysaccharides in an axenic culture of benthic diatom. Eur J Phycol 32:32-44
11. Decho AW (1990) Microbial exopolymer secretions in ocean environments: their role(s) in food webs and marine processes. Oceanogr Mar Biol Annu Rev 28:73-153
12. Decho AW, Moriarty JW (1990) Bacterial exopolymer utilization by a barpacticoid copepod: a methodology and results. Limnol Oceanogr 35:1039-1049
13. Dubois M, Gilles KA, Hamilton JK, Rebers PA, Smith F (1956) Colorimetric method for determination of sugars and related substances. Anal Chem 28:350-356
14. Dutz J, Klein Breteler WCM, Kramer G (2005) Inhibition of copepod feeding by exudates and transparent exopolymer particles (TEP) derived from Phaeocystis globosa phytoplankton community. Harmful Algae 4:929-940 (Pubitemid 40938578)
15. Engel A (2000) The role of the transparent exopolymer particles (TEP) in the increase in apparent stickiness during the decline of a diatom bloom. J Plankton Res 22:485-497 (Pubitemid 30165808)
16. Engel A (2004) Distribution of the transparent exopolymer particles (TEP) in the northeast Atlantic Ocean and their potential significance for aggregation processes. Deep- Sea Res I 51:83-92 (Pubitemid 38047174)
17. Engel A, Passow U (2001) Carbon and nitrogen content of transparent exopolymer particles (TEP) in relation to their Alcian Blue adsorption. Mar Ecol Prog Ser 219:1-10 (Pubitemid 32956333)
18. Engel A, Meyerhöfer M, v. Bröckel K (2002) Chemical and biological composition of suspended particles and aggregates in the Baltic Sea in summer (1999). Estuar Coast Shelf Sci 55:729-741
19. Flemming HC, Wingender J (2001) Relevance of microbial extracellular polymeric substances (EPSs) Part I: structural and ecological aspects. Water Sci Technol 43:1-8 (Pubitemid 32447429)
20. Flood PR, Deibel D, Morris CC (1992) Filtration of colloidal melanin form sea water by planktonic tunicates. Nature 355: 630-632
21. Garcia CM, Prieto L, Echevarria F, Garcia-Lafuente J, Ruiz J, Rubin JP (2002) Hydrodynamics and the spatial distribution of plankton and TEP in the Gulf of Cadiz (SW Iberian Peninsula). J Plankton Res 24:817-833 (Pubitemid 34923118)
22. Gentilhomme V, Lizon F (1998) Seasonal cycle of nitrogen and phytoplankton biomass in a well-mixed coastal system (Eastern English Channel). Hydrobiologia 361: 191-199 (Pubitemid 28219663)
23. Genty B, Briantais J, Baker NR (1989) The relationship between the quantum yield of photosynthetic electron transport and of quenching chlorophyll fluorescence. Biochim Biophys Acta 990:87-92
24. Hoagland KD, Rosowski JR, Gretz MR, Roemer SC (1993) Diatom extracellular polymeric substances: function, finestructure, chemistry and physiology. J Phycol 29:537-566
25. Hong Y, Smith WO Jr, White AM (1997) Studies on transparent exopolymer particles (TEP) produced in the Ross Sea (Antarctica) and by Phaeocystis antarctica (Prymnesiophyceae). J Phycol 33:368-376 (Pubitemid 27372201)
26. Jouenne F, Lefebvre S, Véron B, Lagadeuc Y (2005) Biological and physicochemical factors controlling short-term variability in phytoplankton primary production and photosynthetic parameters in a macrotidal ecosystem (eastern English Channel). Estuar Coast Shelf Sci 65:421-439 (Pubitemid 41406072)
27. Jouenne F, Lefebvre S, Véron B, Lagadeuc Y (2007) Phytoplankton community structure and primary production in small intertidal estuarine-bay ecosystem (eastern English Channel, France). Mar Biol 151:805-825 (Pubitemid 46713049)
28. Kiorbøe T (2000) Colonization of marine snow aggregates by invertebrate zooplankton abundance, scaling and possible role. Limnol Oceanogr 45:479-484 (Pubitemid 30152822)
29. Kiorbøe T, Hansen JLS (1993) Phytoplankton aggregate formation: observations of patterns and mechanisms of cell sinking and the significance of exopolymeric material. J Plankton Res 15:993-1018 (Pubitemid 24415332)
30. Li X, Passow U, Logan BE (1998) Fractal dimensions of small (15-200 μm) particles in Eastern Pacific coastal waters. Deep-Sea Res Part I 45:115-131 (Pubitemid 28324416)
31. Lind JL, Heimann K, Miller EA, van Vliet C, Hoogenraad NJ, Wetherbee R (1997) Substratum adhesion and gliding in a diatom are mediated by extracellular proteoglycans. Planta 203:213-221 (Pubitemid 27452964)
32. Logan BE, Passow U, Alldredge AL, Grossart HP, Simon M (1995) Rapid formation and sedimentation of large aggregates is predictable from coagulation rates (half-lives) of transparent exopolymer particles (TEP). Deep-Sea Res II 42:203-214
33. Margalef R, Estrada M, Blasco D (1979) Functional morphology of organisms involved in red tide, as adapt to decaying turbulence. In: Taylor D, Seliger H (eds) Toxic dinoflagellate blooms. Elsevier, New York, p 89-94
34. Mari X, Burd A (1998) Seasonal size spectra of transparent exopolymeric particles (TEP) in a coastal sea and comparison with those predicted using coagulation theory. Mar Ecol Prog Ser 163:63-76 (Pubitemid 28178569)
35. 15N) and modelling as tools to estimate the trophic ecology of cultivated oysters in two contrasting environments. Mar Biol 153:673-688
36. Ménesguen A, Gohin F (2006) Observation and modelling of natural retention structures in the English Channel. J Mar Syst 63:244-256
37. Ortega-Retuerta E, Reche I, Pulido-Villena E, Agustí S, Duarte CM (2009) Uncoupled distributions of transparent exopolymer particles (TEP) and dissolved carbohydrates in the Southern Ocean. Mar Chem 115:59-65
38. Pacobahyba LD, Bianchini I Jr, Vieira AAH, Cunha-Santino MB (2004) The mineralization kinetics of Straurastrum iversenii Nygaard var. americanum. Acta Limnol Brasiliensa 16:391-400
39. Pannard A, Claquin P, Klein C, Le Roy B, Véron B (2008) Short term variability of the phytoplankton community in coastal ecosystem in response to physical and chemical conditions changes. Estuar Coast Shelf Sci 80:212-224
40. Parkhill JP, Maillet G, Cullen JJ (2001) Fluorescence-based maximal quantum yield for PSII as a diagnostic of nutrient stress. J Phycol 37:517-529 (Pubitemid 32827868)
41. Passow U (2002) Production of transparent exopolymer particles (TEP) by phyto- and bacterioplankton. Mar Ecol Prog Ser 236:1-12 (Pubitemid 34780675)
42. Passow U, Alldredge AL (1994) Distribution, size and bacterial colonization of transparent exopolymer particles (TEP) in the ocean. Mar Ecol Prog Ser 113:185-198
43. Passow U, Alldredge AL (1995a) A dye-binding assay for the spectrophotometric measurement of transparent exopolymer particles (TEP). Limnol Oceanogr 40:1326-1335 (Pubitemid 3016462)
44. Passow U, Alldredge AL (1995b) Aggregation of diatoms bloom in mecocosm: the role of transparent exopolymer particles (TEP). Deep-Sea Res II 42:99-109
45. Passow U, Alldredge AL (1999) Do transparent exopolymer particles (TEP) inhibit grazing by the euphausiid Euphausia superba? J Plankton Res 21:2203-2217
46. Passow U, Shipe RF, Murray A, Pak DK, Brzezinski MA, Alldredge AL (2001) The origin of transparent exopolymer particles (TEP) and their role in the sedimentation of particulate matter. Cont Shelf Res 21:327-346 (Pubitemid 32192122)
47. Penna A, Bertuli S, Penna N, Magnani M (1999) Influence of nutrient ratios on the in vitro extracellular polysaccharide production by marine diatoms from the Adriatic Sea. J Plankton Res 21:1681-1690 (Pubitemid 29451929)
48. Prieto L, Sommer F, Stibor H, KoeveW(2001) Effects of planktonic copepods on transparent exopolymeric particles (TEP) abundance and size spectra. J Plankton Res 23: 515-525 (Pubitemid 32526434)
49. Prieto L, Ruiz J, Echevarria F, Garcia CM and others (2002) Scales and processes in the aggregation of diatom blooms: high time resolution and wide size range records in a mesocosm study. Deep-Sea Res I 49:1233-1253
50. Prieto L, Navarro G, Cozar A, Echevarria F, Garcia CM (2006) Distribution of TEP in the euphotic and upper mesopelagic zones of the southern Iberian coasts. Deep-Sea Res II 53: 1314-1328 (Pubitemid 44374336)
51. Radic T, Kraus R, Fuks D, Radic J, Pecar O (2005) Transparent exopolymeric particles' distribution in the northern Adriatic and their relation to microphytoplankton biomass and composition. Sci Total Environ 353:151-161 (Pubitemid 41757608)
52. Ramaiah N, Furuya K (2002) Seasonal variations in phytoplankton composition and transparent exopolymer particles in a eutrophicated coastal environment. Aquat Microb Ecol 30:69-82 (Pubitemid 36028975)
53. Ramaiah N, Yoshikawa T, Furuya K (2001) Temporal variations in transparent exopolymer particles (TEP) associated with a diatom spring bloom in a subartic ria in Japan. Mar Ecol Prog Ser 212:79-88 (Pubitemid 32258397)
54. Schreiber U, Schliva U, BilgerW(1986) Continuous recording of photochemical and non-photochemical chlorophyll fluorescence quenching with a new type of modulation fluorometer. Photosynth Res 10:51-62
55. Schuster S, Herndl GJ (1995) Formation and significance of transparent exopolymer particles in the northern Adriatic Sea. Mar Ecol Prog Ser 124:227-236 (Pubitemid 26438761)
56. Shimada A, Nakata H, Nakamura I (1997) Acidic exopolysaccharide produced by Enterobacter sp. J Ferment Bioeng 84: 113-118
57. Smayda TJ, Reynolds CS (2001) Community assembly in marine phytoplankton: application of recent models to harmful dinoflagellate bloom. J Plankton Res 23:447-461 (Pubitemid 32526429)
58. Smith DJ, Underwood GJC (2000) The production of extracellular carbohydrates by estuarine benthic diatoms: the effects of growth phase and light and dark treatment. J Phycol 36:321-333
59. Staats N, de Winder B, Stal LJ, Mur LR (1999) Isolation and characterisation of extracellular polysaccharides from the epipelic diatoms Cylindrotheca closterium and Navicula salinarum. Eur J Phycol 34:161-169 (Pubitemid 29285143)
60. Staats N, Stal LJ, Mur LR (2000) Exopolysaccharide production by the epipelic diatom Cylindrotheca closterium: effects of nutrient conditions. J Exp Mar Biol Ecol 249: 13-27 (Pubitemid 30350738)
61. Suzuki N, Kato K (1953) Studies on suspended materials. Marine snow in the sea. I. Sources of marine snow. Bull Fac Fish Hokkaido Univ 4:132-135
62. Ter Braak CJF (1986) Canonical correspondence analysis: a new eigenvector technique for multivariate direct gradient analysis. Ecology 67:1167-1179
63. Ter Braak CJF, Smilauer P (2002) CANOCO Reference manual and CanoDraw for Windows User's guide: software for canonical community ordination (version 4.5). Microcomputer Power, Ithaca, NY, available at www. canoco.com ter Braak CJF, Verdonschot PFM (1995) Canonical correspondance analysis and related multivariate methods in aquatic ecology. Aquat Sci 57:225-289
64. Thornton DCO (2002) Diatom aggregation in the sea: mechanisms and ecological implications. Eur J Phycol 37: 149-161 (Pubitemid 34523143)
65. Tranvik LJ, Sherr EB, Sherr BF (1993) Uptake and utilization of 'colloidal DOM' by heterotrophic flagellates in seawater. Mar Ecol Prog Ser 92:301-309 (Pubitemid 24409349)
66. Underwood GJC, Smith DJ (1998) Predicting epipelic diatom exopolymer concentrations in intertidal sediments from sediments chl a. Microb Ecol 35:116-125 (Pubitemid 28192000)
67. Underwood GJC, Paterson DM, Parkes RJ (1995) The measurement of microbial carbohydrate exopolymers from intertidal sediments. Limnol Oceanogr 40:1243-1253 (Pubitemid 3016469)
68. Underwood GJC, Nilsson C, Sundbäck K, Wulff A (1999) Short-term effects of UVB radiation on chlorophyll fluorescence, biomass, pigments and carbohydrate fractions in a benthic diatom. J Phycol 35:656-666 (Pubitemid 29407467)
69. Underwood GJC, Boulcott M, Raines CA, Waldron K (2004) Environmental effects on exopolymer production by marine benthic diatoms: dynamics, changes in composition, and pathway of production. J Phycol 40:293-304 (Pubitemid 38453966)
70. Urbani R, Magaletti E, Sist P, Cicero AM (2005) Extracellular hydrocarbonates released by the marine diatoms Cylindrotheca closterium, Thalassiosira pseudonana and Skeletonema costatum: effect of P-depletion and growth status. Sci Total Environ 353:300-306 (Pubitemid 41757619)
71. Welch SA, Barker WW, Banfield JF (1999) Microbial extracellular polysaccharides and plagioclase dissolution. Geochim Cosmochim Acta 63:1405-1419
72. Welschmeyer NA (1994) Fluorometric analysis of chlorophyll a in the presence of chlorophyll b and pheopigments. Limnol Oceanogr 39:1985-1992
73. Wolfstein K, Stal LJ (2002) Production of extracellular polymeric susbtances (EPS) by benthic diatoms: effects of irradiance and temperature. Mar Ecol Prog Ser 236:13-22 (Pubitemid 34780676)