DNA copy number aberrations associated with the clinicopathological features of colorectal cancers: Identification of genomic biomarkers by array-based comparative genomic hybridization

Oncology Reports

Volumn 25, Issue 6, 2011, Pages 1603-1611

  Nakao, Motonao ^a   Kawauchi, Shigeto ^a   Uchiyama, Tetsuji ^b   Adachi, Jun ^b   Ito, Hideaki ^a   Chochi, Yasuyo ^a   Furuya, Tomoko ^a   Oga, Atsunori ^a   Sasaki, Kohsuke ^a  

^a YAMAGUCHI UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

^b NATIONAL HOSPITAL ORGANIZATION   (Japan)

Author keywords

Array based comparative genome hybridization; Colorectal cancer; DNA copy number aberration; Genomic biomarker

Indexed keywords

ADULT; AGED; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CANCER INVASION; CANCER STAGING; CHROMOSOME 10P; CHROMOSOME 10Q; CHROMOSOME 12Q; CHROMOSOME 17P; CHROMOSOME 20P; CHROMOSOME 3P; CHROMOSOME 8Q; CHROMOSOME 9Q; CHROMOSOME ABERRATION; CHROMOSOME LOSS; COLORECTAL CANCER; COMPARATIVE GENOMIC HYBRIDIZATION; CONTROLLED STUDY; COPY NUMBER ABERRATION; FEMALE; GENETIC ASSOCIATION; GENETIC GAIN; GENETIC MARKER; HUMAN; HUMAN TISSUE; LYMPH NODE METASTASIS; MAJOR CLINICAL STUDY; MALE; PRIORITY JOURNAL; PROGNOSIS;

CHROMOSOMES, ARTIFICIAL, BACTERIAL; COLORECTAL NEOPLASMS; COMPARATIVE GENOMIC HYBRIDIZATION; FEMALE; GENE DOSAGE; HUMANS; MALE; NEOPLASM STAGING; TUMOR MARKERS, BIOLOGICAL;

EID: 79954510760     PISSN: 1021335X     EISSN: 17912431     Source Type: Journal    
DOI: 10.3892/or.2011.1246     Document Type: Article

References (16)

1. Hamilton SR, Vogelstein B, Kudo S, Riboi E, Nakamura S, Hainaut P, Rubio CA, Sobin LH, Fogt F, Winawer SJ, Goldgar DE and Jass JR: Carcinoma of the colon and rectum. In: World Health Organization Classification of Tumors: Pathology and Genetics of Tumors of the Digestive System. Hamilton SR and Aaltonen LA (eds). IARC Press, Lyon, pp105-119, 2000.
2. Fearon ER and B Vogelstein: A genetic model for colorectal tumorigenesis. Cell 61: 759-767, 1990.
3. Lengauer C, Kinzler KW and Vogelstein B: Genetic instability in colorectal cancers. Nature 386: 623-627, 1997.
4. Pinkel D, Segraves R, Sudar D, Clark S, Poole I, Kowbel D, Collins C, Kuo WL, Chen C, Zhai Y, Dairkee SH, Ljung BM, Gray JW and Albertson DG: High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat Genet 20: 207-211, 1998. (Pubitemid 28455458)
5. Veltman JA, Fridlyand J, Pejavar S, Olshen AB, Korkola JE, DeVries S, Carroll P, Kuo WL, Pinkel D, Albertson D, Cordon-Cardo C, Jain AN and Waldman FM: Array-based comparative genomic hybridization for genome-wide screening of DNA copy number in bladder tumors. Cancer Res 63: 2872-2880, 2003. (Pubitemid 36667159)
6. Lengauer C, Kinzler KW and Vogelstein B: Genetic instabilities in human cancers. Nature 396: 643-649, 1998.
7. Liu XP, Kawauchi S, Oga A, Sato T, Ikemoto K, Ikeda E and Sasaki K: Chromosomal aberrations detected by comparative genomic hybridization predict outcome in patients with colorectal carcinoma. Oncol Rep 17: 261-267, 2007.
8. Nakao M, Kawauchi S, Furuya T, Uchiyama T, Adachi J, Okada T, Ikemoto K, Oga A and Sasaki K: Identification of DNA copy number aberrations associated with metastases of colorectal cancer using array CGH profiles. Cancer Genet Cytogenet 188: 70-76, 2009.
9. UICC TNM Classification of Malignant Tumours. LH Sobin and Wittekind CH (eds). 6th edition. Wiley-Liss, Oxford, 2002.
10. Naylor TL, Greshock J, Wang Y, Colligon T, Yu QC, Clemmer V, Zaks TZ and Weber BL: High resolution genomic analysis of sporadic breast cancer using array-based comparative genomic hybridization. Breast Cancer Res 7: 1186-1198, 2005.
11. van Duin M, van Marion R, Vissers K, Watson JE, van Weerden WM, Schroder FH, Hop WC, van der Kwast TH, Collins C and van Dekken H: High-resolution array comparative genomic hybridization of chromosome arm 8q: evaluation of genetic progression markers for prostate cancer. Genes Chromosomes Cancer 44: 438-449, 2005. (Pubitemid 41476795)
12. Reedijk M, Odorcic S, Chang L, Zhang H, Miller N, McCready DR, Lockwood G and Egan SE: High-level coexpression of JAG1 and NOTCH1 is observed in human breast cancer and is associated with poor overall survival. Cancer Res 65: 8530-8537, 2005. (Pubitemid 41330622)
13. Reedijk M, Pinnaduwage D, Dickson BC, Mulligan AM, Zhang H, Bull SB, OMalley FP, Egan SE and Andrulis IL: JAG1 expression is associated with a basal phenotype and recurrence in lymph node-negative breast cancer. Breast Cancer Res Treat 111: 439-448, 2008.
14. Rodilla V, Villanueva A, Obrador-Hevia A, Robert-Moreno A, Fernandez-Majada V, Grilli A, Lopez-Bigas N, Bellora N, Alba MM, Torres F, Dunach M, Sanjuan X, Gonzalez S, Gridley T, Capella G, Bigas A and Espinosa L: Jagged1 is the pathological link between Wnt and Notch pathways in colorectal cancer. Proc Natl Acad Sci USA 106: 6315-6320, 2009.
15. Robert-Moreno A, Guiu J, Ruiz-Herguido C, Lopez ME, Ingles- Esteve J, Riera L, Tipping A, Enver T, Dzierzak E, Gridley T, Espinosa L and Bigas A: Impaired embryonic haematopoiesis yet normal arterial development in the absence of the Notch ligand Jaggedl. EMBO J 27: 1886-1895, 2008.
16. Miyashita A, Arai H, Asada T, Imagawa M, Matsubara E, Shoji M, Higuchi S, Urakami K, Kakita A, Takahashi H, Toyabe S, Akazawa K, Kanazawa I, Ihara Y and Kuwano R: Genetic association of CTNNA3 with late-onset Alzheimer's disease in females. Hum Mol Genet 16: 2854-2869, 2007. (Pubitemid 350048384)