Identification and characterization of a FYVE domain from the early diverging eukaryote Giardia lamblia

Current Microbiology

Volumn 62, Issue 4, 2011, Pages 1179-1184

  Sinha, Abhishek ^a   Mandal, Sananda ^a   Banerjee, Sumana ^a   Ghosh, Arjun ^b   Ganguly, Sandipan ^b   Sil, Alok Kumar ^c   Sarkar, Srimonti ^a  

^a INDIAN INSTITUTE OF SCIENCE EDUCATION AND RESEARCH KOLKATA   (India)

^b NATIONAL INSTITUTE OF CHOLERA AND ENTERIC DISEASES   (India)

^c UNIVERSITY OF CALCUTTA   (India)

Author keywords

[No Author keywords available]

Indexed keywords

GREEN FLUORESCENT PROTEIN; PHOSPHATIDYLINOSITOL 3 PHOSPHATE;

ARTICLE; BINDING AFFINITY; BIOCHEMISTRY; CELL MATURATION; CELL MIGRATION; CELLULAR DISTRIBUTION; CONTROLLED STUDY; CYST (RESTING STAGE); ENDOSOME; GENE EXPRESSION; GENETIC CONSERVATION; GENETIC VARIABILITY; GIARDIA LAMBLIA; IN VITRO STUDY; IN VIVO STUDY; LIGAND BINDING; MOLECULAR DYNAMICS; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENETIC TREE; PRIORITY JOURNAL; PROTEIN DETERMINATION; PROTEIN DOMAIN; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SACCHAROMYCES CEREVISIAE; SEQUENCE ALIGNMENT; STRUCTURE ANALYSIS; TROPHOZOITE;

AMINO ACID SEQUENCE; ENDOSOMES; EUKARYOTA; EVOLUTION, MOLECULAR; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GIARDIA LAMBLIA; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROTEIN STRUCTURE, TERTIARY; PROTEIN TRANSPORT; PROTEINS; SEQUENCE ALIGNMENT;

EUKARYOTA; GIARDIA INTESTINALIS;

EID: 79954417537     PISSN: 03438651     EISSN: 14320991     Source Type: Journal    
DOI: 10.1007/s00284-010-9845-5     Document Type: Article

References (23)

1. S Banerjee S Basu S Sarkar 2010 Comparative genomics reveals selective distribution and domain organization of FYVE and PX domain proteins across eukaryotic lineages BMC Genomics 11 83 94 20122178 10.1186/1471-2164-11-83
2. CG Burd SD Emr 1998 Phosphatidylinositol 3-phosphate signaling mediated by specific binding to RING FYVE domains Mol Cell 2 157 162 9702203 10.1016/S1097-2765(00)80125-2 1:CAS:528:DyaK1cXltVCjuro%3D (Pubitemid 128378978)
3. SSE Cox MV Giezen SJ Tarr MR Crompton J Tovar 2006 Evidence from bioinformatics, expression and inhibition studies of phosphoinositide-3 kinase signalling in Giardia intestinalis BMC Microbiol 6 45 16707026 10.1186/1471-2180-6-45 (Pubitemid 43990520)
4. DE Feely JK Dyer 1987 Localization of acid phosphatase activity in Giardia lamblia and Giardia muris trophozoites J Protozool 34 80 83 3572844 1:CAS:528:DyaL2sXhtlCrtL0%3D (Pubitemid 17007530)
5. Felsenstein J PHYLIP (Phylogeny Interference Package) version 3.6. Department of Genome Sciences, University of Washington, Seattle
6. JM Gaullier A Simonsen A D'Arrigo B Bremnes H Stenmark R Aasland 1998 FYVE fingers bind PtdIns(3)P Nature 394 432 433 9697764 10.1038/28767 1:CAS:528:DyaK1cXltVGlsL8%3D (Pubitemid 28373944)
7. AV Kane HD Ward GT Keusch MEA Pereira 1991 In vitro encystations of Giardia lamblia: large scale production of in vitro cysts and strains and clone differences in encystations efficiency J Parasitol 77 974 981 1779302 10.2307/3282752 1:STN:280:DyaK387jvFantA%3D%3D
8. M Marti Y Li EM Schraner P Wild P Kohler AB Hehl 2003 The secretory apparatus of an ancient eukaryote: protein sorting to separate export pathways occurs before formation of transient Golgi-like compartments Mol Biol Cell 14 1433 1447 12686599 10.1091/mbc.E02-08-0467 1:CAS:528:DC%2BD3sXjtVals7w%3D (Pubitemid 36547412)
9. K Nakada-Tsukui H Okada BN Mitra T Nozaki 2009 Phosphatidylinositol- phosphates mediate cytoskeletal reorganization during phagocytosis via a unique modular protein consisting of RhoGEF/DH and FYVE domains in parasitic protozoon Entamoeba histolitica Cell Microbiol 11 1471 1491 19496789 10.1111/j.1462-5822. 2009.01341.x 1:CAS:528:DC%2BD1MXhtFOgs7%2FI
10. G Odorizzi M Babst SD Emr 1999 Fab1p PtdIns(3)P 5-Kinase function essential for protein sorting in the multivesicular body Cell 95 847 858 10.1016/S0092-8674(00)81707-9 (Pubitemid 29014464)
11. NG Pasteris A Cadle LJ Logie ME Porteous CE Schwartz RE Stevenson TW Glover RS Wilroy JL Gorski 1994 Isolation and characterisation of the faciogenital dysplasia (Aarskog-Scott syndrome) gene: a putative Rho/Rac guanine nucleotide exchange factor Cell 79 669 678 7954831 10.1016/0092-8674(94)90552-5 1:CAS:528:DyaK2MXit1Gksrg%3D (Pubitemid 24363810)
12. C Raiborg KG Bache A Mehlum E Stang H Stenmark 2001 Hrs recruits clathrin to early endosomes EMBO J 20 5008 5021 11532964 10.1093/emboj/20.17.5008 1:CAS:528:DC%2BD3MXnt1Cmurg%3D (Pubitemid 32848652)
13. MG Roth 2004 Phosphoinositides in constitutive membrane traffic Physiol Rev 84 699 730 15269334 10.1152/physrev.00033.2003 1:CAS:528: DC%2BD2cXmtlCnurg%3D (Pubitemid 38828280)
14. H Stenmark R Aasland PC Driscoll 2002 The Phosphatidylinositol 3-phosphate-binding FYVE finger FEBS Lett 513 77 84 11911884 10.1016/S0014-5793(01)03308-7 1:CAS:528:DC%2BD38XitFejtLk%3D (Pubitemid 34242982)
15. JD Thompson DG Higgins TJ Gibson 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673 4680 7984417 10.1093/nar/22.22.4673 1:CAS:528: DyaK2MXitlSgu74%3D (Pubitemid 24354800)
16. T Tsukazaki TA Chiang AF Davison L Attisano JL Wrana 1998 SARA, a FYVE domain protein that recruits Smad2 to the TGFβ receptor Cell 95 779 791 9865696 10.1016/S0092-8674(00)81701-8 1:CAS:528:DyaK1MXivVKj (Pubitemid 29014458)
17. G Tuller T Nemec C Hrastnik G Daum 1999 Lipid composition of subcellular membranes of an FY1679-derived haploid yeast wild type strain grown on different carbon sources Yeast 15 1555 1564 10514572 10.1002/(SICI)1097-0061(199910)15: 14<1555::AID-YEA479>3.0.CO;2-Z 1:CAS:528:DyaK1MXmvFOitbs%3D (Pubitemid 29472166)
18. B Vanhaesebroeck SJ Leevers K Ahmadi, et al. 2001 Synthesis and function of 3-phosphorylated inositol lipids, Richardson CC Annu Rev Biochem 70 535 602 11395417 10.1146/annurev.biochem.70.1.535 1:CAS:528:DC%2BD3MXlsVehtL0%3D (Pubitemid 32662219)
19. TA Vida SD Emr 1995 A new vital stain for visualizing vacuolar membrane dynamics and endocytosis in yeast J Cell Biol 128 779 792 7533169 10.1083/jcb.128.5.779 1:CAS:528:DyaK2MXktVGqtLw%3D
20. AM Waterhouse JB Procter M Clamp GJ Barton 2009 Jalview version 2 a multiple sequence alignment editor and analysis workbench Bioinformatics 25 9 1189 1191 19151095 10.1093/bioinformatics/btp033 1:CAS:528:DC%2BD1MXltFWis7Y%3D
21. MBL Weiland AG McArthur HG Morrison ML Sogin SG Svärd 2005 Annexin-like alpha giardins: a new cytoskeletal gene family in Giardia lamblia Int J Parasitol 35 617 626 15862575 10.1016/j.ijpara.2004.12.009 1:CAS:528:DC%2BD2MXjs1GitLw%3D (Pubitemid 40603399)
22. KM Weixel AB Perry SC Watkins M Aridor OA Weisz 2005 Distinct Golgi populations of phosphatidylinositol 4-phosphate regulated by phosphatidylinositol 4-kinases J Biol Chem 280 10501 10508 15634669 10.1074/jbc.M414304200 1:CAS:528:DC%2BD2MXit1ersL0%3D (Pubitemid 40395909)
23. AE Wurmser JD Gary SD Emr 1999 Phosphoinositide 3-Kinases and their FYVE domain-containing effectors as regulators of vacuolar/lysosomal membrane trafficking pathways J Biol Chem 274 9129 9132 10092582 10.1074/jbc.274.14.9129 1:CAS:528:DyaK1MXisVWlsLw%3D (Pubitemid 29180215)