Parameterization of a coupled CO2 and H2O gas exchange model at the leaf scale of Populus euphratica

Hydrology and Earth System Sciences

Volumn 14, Issue 3, 2010, Pages 419-431

  Zhu, G F ^a,b   Li, X ^a   Su, Y H ^a   Huang, C L ^a  

^a Chinese Academy of Sciences   (China)

^b LANZHOU JIAOTONG UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

DIURNAL PATTERN; ELECTRON TRANSPORT RATE; GAS EXCHANGE MODEL; POPULUS EUPHRATICA; STANDARD ERRORS; STOMATAL CONDUCTANCE; TRANSPIRATION RATES; VALIDATION DATA;

CARBOXYLATION; FORESTRY; PHOTOSYNTHESIS;

CARBON DIOXIDE;

EID: 79953833651     PISSN: 10275606     EISSN: 16077938     Source Type: Journal    
DOI: 10.5194/hess-14-419-2010     Document Type: Article

References (51)

1. Baldocchi, D. and Meyers, T.: On using eco-physiological, micrometeorological and biogeochemical theory to evaluate carbon dioxide, water vapor and trace gas fluxes over vegetation: a perspective, Agr. Forest Meteorol., 90, 1-25, 1998.
2. Ball, J. T., Woodrow, I. E., and Berry, J. A.: A model predicting stomatal conductance and its contribution to the control of photosynthesis under different environmental conditions, in: Progress in Photosynthesis Research, edited by: Biggins, I., Martinus-Nijhoff Publishers, Dordrecht, The Netherlands, 221-224, 1987.
3. Barth, N. H.: Oceanographic experiment design II: Genetic algorithms, J. Amtos. Oceanic. Technol., 9, 434-443, 1992.
4. Bernacchi, C. J., Pimentel, C., and Long, S. P.: In vivo temperature response functions of parameters required to model RuBPlimited photosynthesis, Plant, Cell Environ., 26, 1419-1430, 2003.
5. Bernacchi, C. J., Portis, A. R., Nakano, H., von Caemmerer, S., and Long, S. P.: Temperature response of mesophyll conductance. Implications for the determination of Rubisco enzyme kinetics and for limitations to photosynthesis in vivo, Plant Cell Environ., 130, 1-7, 2002.
6. Bernacchi, C. J., Singsaas, E. L., Pimentel, C., Portis Jr., A. R., and Long, S. P.: Improved temperature response functions for models of Rubisco-limited photosynthesis, Plant Cell Environ., 24, 253-259, 1992.
7. Bernacchi, C. J., Singsaas, E. L., Pimentel, C., Portis, A. R., and Long, S. P.: Improved temperature response functions for models of Rubisco-limited photosynthesis, Plant Cell Environ., 24, 253-259, 2001.
8. Cannell, M. G. R. and Thornley, J. H. M.: Temperature and CO2 responses of leaf and canpony photosynthesis: a clarification using the non-rectangular hyperbola model of photosynthesis, Ann. Bot.-London, 82, 883-892, 1998.
9. Chen, Y. P., Chen, Y. N., Li, W. H., and Xu, C. C.: Characterization of photosynthesis of Populus euphratica grown in the arid region, Photosynthetica, 44(4), 622-626, 2006.
10. Chen, Y. N.,Wang, Q., Ruan, X., Li,W. H., and Chen, Y. P.: Physiological response of Populus euphratica to artificial waterrecharge of the lower reaches of Tarim River, Acta Bot. Sin., 46, 1393-1401, 2004.
11. Cieniawski, S. E., Eheart, J.W., and Ranjithan, S.: Using genetic algorithms to solve a multiobjective groundwater monitoring problem, Water Resour. Res., 31, 399-409, 1995.
12. Collatz, G. J., Ball, J. T., Grivet, C., and Berry, J. A.: Physiological and environmental regulation of stomatal conductance, photosynthesis and transpiration: a model that includes laminar boundary layer, Agr. Forest Meteorol., 54, 107-136, 1991.
13. De-Pury, D. G. and Farquhar, G. D.: Simple scaling of photosynthesis from leaves to canopies without the errors of big-leaf models, Plant Cell Environ., 20, 537-337, 1997.
14. Dubois, J. J. B., Fiscus, E. L., Booker, F. L., Flowers, M. D., and Reid, C. C.: Optimizing the statistical estimation of the parameters of the Farquhar-von Caemmerer-Berry model of photosynthesis, New Phytol., 176, 402-414, 2007.
15. Evans, J. R.: The dependence of quantum yield on wavelength and growth irradiance, Aust. J. Plant Physiol., 14, 69-79,1987.
16. Falge, E., Graber,W., Siegwolf, R., and Tenhunen, J. D.: A modelof the gas exchange response of Picea abies to habitat condi-tions, Trees, 10, 277-287, 1996.
17. Farquhar, G. D., von-Caemmerer, S., and Berry, J. A.: A biochemical model of photoshynthetic CO2 assimilation in leaves of C3 species, Planta, 149, 78-90, 1980.
18. Gao, Q., Zhao, P., Zeng, X., Cai, X., and Shen, W.: A model of stomatal conductance to quantify the relationship between leaf transpiration, microlimate and soil water stress, Plant Cell Environ., 25, 1373-1381, 2003.
19. Goldberg, D. E.: Genetic Algorithms in Search, Optimization and Machine Learning, Addison-Wesley Longman Publishing Co., Inc., Boston, MA, USA, 1989.
20. Gu, R. S., Liu, Q. L., Pei, D., and Jiang, X. N.: Understanding saline and osmotic tolerance of Populus euphratica suspended cells, Plant Cell Tiss. Org., 78, 261-265, 2004.
21. Harley, P. C. and Baldocchi, D. D.: Scaling carbon dioxide andwater vapour exchange from leaf to canopy in a deciduous for est. I. Leaf model parametrization, Plant Cell Environ., 18, 1146-1156, 1995.
22. Harley, P. C., Thomas, R. B., Reynolds, J. F., and Strain, B. R.: Modelling photosynthesis of cotton grown in elevated CO2, Plant Cell Environ., 15, 271-282, 1992.
23. Holland, J. H.: Adaptation in natural and artificial systems, Ann Arbor, MI, The University of Michigan Press, 1975.
24. Hu, B., Tang, G., Ma, J. W., and Yang, H. Z.: Parametric inversion of viscoelastic media from VSP data using a genetic algorithms, Appl. Geophys., 4(3), 194-200, 2007.
25. Jurik, T. W., Weber, J. A., and Gates, D. M.: Effects of temperature and light on photosynthesis of dominant species of a northern hardwood forest, Bot. Gaz., 149, 203-208, 1988.
26. Kattge, J. and Knorr,W.: Temperature acclimation in a biochemical model of photosynthesis: a reanalysis of data from 36 species, Pant Cell Environ., 30, 1176-1190, 2007.
27. Kim, S. K. and Lieth, J. H.: A coupled model of photosynthesis, stomatal conductance and transpiration for a rose leaf (Rosa hybrida L.), Ann. Bot.-London, 91, 771-781, 2003.
28. Kosugi, Y., Shibata, S., and Kobashi, S.: Parameterization of the CO2 and H2O gas exchange of several temperate deciduousbroad-leaved trees at the leaf scale considering seasonalchanges, Plant Cell Environ., 26, 285-301, 2003.
29. Lee, Y. H., Park, S. K., and Chang, D.-E.: Parameter estimation using the genetic algorithm and its impact on quantitative precipitation forecast, Ann. Geophys., 24, 3185-3189, 2006, http://www.ann-geophys.net/24/3185/2006/.
30. Leuning, R.: A critical appraisal of combined stomatalphotosynthesis model for C3 plants, Plant Cell Environ., 18, 339-355, 1995.
31. Lhomme, J. P., Elguero, E., Chehbouni, A., and Boulet, G.: Stomatal control of transpiration: examination of Monteith's formulation of canopy resistance, Water Resour. Res., 34, 2301-2308, 1998.
32. Long, S. P., Postl, W. F., and Bolharnordenkampf, H. R.: Quantum yields for uptake of carbon dioxide in C3 vascular plants of contrasting habitats and taxonomic groupings, Planta, 189, 226-234, 1993.
33. Loreto, F., Di-Marco, G., Tricoli, D., and Sharkey, T. D.: Measurements of mesophyll conductance, photosynthetic electron transport and alternative electron sinks of field grown wheat leaves, Photosynth. Res., 41, 397-403, 1994.
34. Ma, T. J., Liu, Q. L., Li, Z., and Zhang, X. J.: Tonoplast H+-ATPase in response to salt stress in Populus euphratica cell suspensions, Plant Sci., 163, 499-505, 2002.
35. Makino, A., Nakano, H., and Mae, T.: Effects of growth temperature on the responses of ribulose-1,5-bisphosphate carboxylase, electron transport components, and sucrose synthesisenzymes to leaf nitrogen in rice, and their relationships to photosynthesis, Plant Physiol., 105, 1231-1238, 1994.
36. Matyssek, R., Guthardt-Georg, M. S., Keller, T. H., and Scheidegger, C. H.: Impairment of gas exchange and structure in birch leaves (Betula pendula) caused by low ozone concentration, Trees, 5, 5-13, 1991.
37. Medlyn, B. E., Dreyer, E., Ellsworth, D., Forstreuter, M., Harley, P. C., Kirschbaum, M. U. F., Leroux, X., Montpied, P., Strassemeyer, J., Walcrofi, A., Wang, K., and Loustau, D.: Temperature response of parameters of a biochemically based model of photosynthesis: II. A review of experimental data, Plant Cell Environ., 25, 1167-1179, 2002.
38. Muchow, R. C.: Stomatal behavior in grain legumes grownunder different soil water regimes in a semi-arid tropical environment, Field Crop Res., 11, 291-307, 1985.
39. Ooka, R. and Komamura, K.: Optimal design method for building energy systems using genetic algorithms, Build. Environ., 44, 1538-1544, 2009.
40. Regehr, D. L., Bazzaz, E. A., and Bogges, W. R.: Photosynthesis, transpiration and leaf conductance of Populus deltoids in relation to flooding and drought, Photosynthetic, 9, 52-61, 1975.
41. Sala, A. and Tenhunen, J. D.: Simulations of canopy net photosynthesis and transpiration in Quercus ilex L. under the influence of seasonal drought, Agr. Forest Meteorol., 78, 203-222, 1996.
42. Sellers, P. J., Randall, D. A., Collatz, G. J., Berry, J. A., Field, C. B., Dazlich, D. A., Zhang, C., Collelo, G. D., and Bounoua, L.: A revised land surface parameterization (SiB2) for atmospheric GCMs. Part I: Modeling formulation, J. Climate, 9, 676-705, 1996.
43. Sharkey, T. D., Bernacchi, A. J., Farquhar, G. D., and Singsaas, E. L: Fitting photosynthetic carbon dioxide response curves for C3 leaves, Plant Cell Environ., 30, 1035-1040, 2007.
44. Sharma, A., Dwivedi, B. N., Singh, B., and Kumar, K.: Introduction of Populus euphratica in Indian semi-arid trans angetic plains, Ann. Forest., 7, 1-8, 1999.
45. Su, Y. H., Zhu G. F., Miao, Z. W., Feng, Q., and Chang, Z. Q.: Estimation of parameters of a biochemically based model of photosynthesis using a genetic algorithm, Plant Cell Environ., 32, 1710-1723, 2009.
46. Su, Y. H., Feng, Q., Zhu, G. F., Si, J. H., and Zhang, Y.W.: Identification and Evolution of Groundwater Chemistry in the Ejin Sub-Basin of the Heihe River, Northwest China, Pedosphere, 17(3), 331-342, 2007.
47. Tcherkez, G. G. B., Farquhar, G. D., and Andrews, T. J.: Despites low catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized, P. Natl. Acad. Sci. USA, 103, 7246-7251, 2006.
48. Tenhunen, J. D., Sala, A., Harley, P. C., Doughherty, R. L., and Reynolds, J. F.: Factors influencing carbon fixation and watuse by mediterranean sclerophyll shrubs during summerdrought, Oecologia, 82, 381-393, 1990.
49. Von-Caemmerer, S.: Biochemical Models of Leaf Photosynthesis, CSIRO Publishing, Collingwood, Victoria, Australia, 1-165, 2000.
50. Wilson, K. B., Baldocchi, D. D., and Hanson, A. P. J.: Leaf ageaffects the seasonal pattern of photosynthetic capacity and netecosystem exchange of carbon in a deciduous forest, Plant Cell Environ., 24, 571-583, 2001.
51. Wullschleger, S. D.: Biochemical limitations to carbon assimilation in C3 Plants-A retrospective analysis of the A/Ci curves from 109 species, J. Exp. Bot., 44, 907-920, 1993.