Spectral sum rules and search for periodicities in DNA sequences

Physics Letters, Section A: General, Atomic and Solid State Physics

Volumn 375, Issue 16, 2011, Pages 1729-1732

  Chechetkin, V R ^a  

^a TROITSK INSTITUTE FOR INNOVATION AND FUSION RESEARCH   (Russian Federation)

Author keywords

DNA sequences; Fourier transform; Latent periodicities; Rayleigh and De Finetti distributions; Spectral sum rules

Indexed keywords

DNA; FOURIER TRANSFORMS; MOLECULAR BIOLOGY;

ASYMPTOTIC FORMS; LATENT PERIODICITIES; MOLECULAR EVOLUTION; PERIODIC PATTERN; RANDOM SEQUENCE; RAYLEIGH; RAYLEIGH DISTRIBUTIONS; SUM RULE;

DNA SEQUENCES;

EID: 79953269366     PISSN: 03759601     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.physleta.2011.03.007     Document Type: Article

References (20)

1. B. Lewin, Genes VII, Oxford University Press, New York, 2000.
2. A.D. McLachlan, M. Stewart, J. Mol. Biol. 103 (1976) 271.
3. V.R. Chechetkin, A.Y. Turygin, J. Phys. A: Math. Gen. 27 (1994) 4875.
4. V.R. Chechetkin, A.Y. Turygin, J. Theor. Biol. 175 (1995) 477.
5. V.J. Makeev, V.G. Tumanyan, Comput. Appl. Biosci. 12 (1996) 49.
6. W. Lee, L. Luo, Phys. Rev. E 56 (1997) 848.
7. S. Tiwari, S. Ramachandran, A. Bhattacharya, S. Bhattacharya, R. Ramaswami, Comput. Appl. Biosci. 13 (1997) 263.
8. G.I. Kutuzova, G.K. Frank, V.Ju. Makeev, N.G. Esipova, R.V. Polozov, Biophysics 42 (1997) 335.
9. S. Tiwari, S. Ramachandran, A. Bhattacharya, S. Bhattacharya, R. Ramaswami, Comput. Appl. Biosci. 13 (1997) 263.
10. E.N. Trifonov, Physica A 249 (1998) 511.
11. G. Dodin, P. Vandergheynst, P. Levoir, C. Cordier, L. Marcourt, J. Theor. Biol. 206 (2000) 323.
12. C. Yin, S.S.-T. Yau, J. Theor. Biol. 247 (2007) 687.
13. V. Paar, N. Pavin, I. Basar, M. Rosandi, M. Gluni, N. Paar, BMC Bioinformatics 9 (2008) 466.
14. C.J.R. Illingworth, K.E. Parkes, C.R. Snell, P.M. Mullineaux, C.A. Reynolds, Biophys. Chem. 133 (2008) 28.
15. V.V. Lobzin, V.R. Chechetkin, Phys. Usp. 43 (2000) 55.
16. D. Anastassiou, IEEE Signal Processing Magazine 18 (2001) 8.
17. W. Feller, An Introduction to Probability Theory and Its Applications, vol. 2, Wiley, New York, 1971.
18. V.R. Chechetkin, V.V. Lobzin, Phys. Lett. A 222 (1996) 354.
19. E.S. Balakirev, V.R. Chechetkin, V.V. Lobzin, F.J. Ayala, Genetics 164 (2003) 533.
20. V.R. Chechetkin, V.V. Lobzin, Phys. Lett. A 328 (2004) 79.