Improvement of the identification of four heavy metals in environmental samples by using predictive decision tree models coupled with a set of five bioluminescent bacteria

Environmental Science and Technology

Volumn 45, Issue 7, 2011, Pages 2925-2931

  Jouanneau, Sulivan ^a   Durand, Marie José ^a   Courcoux, Philippe ^a   Blusseau, Thomas ^a   Thouand, Gérald ^a,b  

^a UNIVERSITÉ DE NANTES   (France)

^b Universite de Nantes   (France)

Author keywords

[No Author keywords available]

Indexed keywords

AUTOMATIC INTERACTIONS; BACTERIAL STRAINS; BEST DECISION; BIOLUMINESCENT BACTERIA; CHEMICAL METHOD; CHI-SQUARED; DECISION TREE MODELS; DETECTION RANGE; ENVIRONMENTAL SAMPLE; INNOVATIVE APPROACHES; PRE-TREATMENTS; SEMI-QUANTITATIVE; STATISTICAL MODELS;

ARSENIC; BACTERIOLOGY; BIOASSAY; BIOLUMINESCENCE; CADMIUM; DECISION TREES; MERCURY (METAL); MIXTURES;

METALS;

ARSENIC; CADMIUM; COPPER; MERCURY;

ALGORITHM; BACTERIUM; BIOASSAY; BIOLUMINESCENCE; CONCENTRATION (COMPOSITION); DATABASE; DECISION MAKING; HEAVY METAL; IDENTIFICATION METHOD; NUMERICAL MODEL; SOFTWARE;

ALGORITHM; ARTICLE; BACTERIAL STRAIN; BIOASSAY; BIOLUMINESCENCE; CHEMICAL ANALYSIS; CHEMICAL REACTION; COMPUTER PROGRAM; DECISION TREE; ESCHERICHIA COLI; NONHUMAN;

BACTERIA; DECISION SUPPORT TECHNIQUES; DECISION TREES; ENVIRONMENTAL MONITORING; LUMINESCENT MEASUREMENTS; METALS, HEAVY; MODELS, STATISTICAL; WATER POLLUTANTS, CHEMICAL; WATER POLLUTION, CHEMICAL;

BACTERIA (MICROORGANISMS);

EID: 79953252225     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es1031757     Document Type: Article

References (39)

1. Audry, S.; Schäfer, J.; Blanc, G.; Jouanneau, J.-M. Fifty-year sedimentary record of heavy metal pollution (Cd, Zn, Cu, Pb) in the Lot River reservoirs (France) Environ. Pollut. 2004, 132 (3) 413-426 (Pubitemid 39119510)
2. Kurniawan, T. A.; Chan, G. Y. S.; Lo, W.-H.; Babel, S. Physico-chemical treatment techniques for wastewater laden with heavy metals Chem. Eng. J. 2006, 118 (1-2) 83-98
3. Corbisier, P. Bacterial metal-lux biosensors for a rapid determination of the heavy metal bioavailability and toxicity in solid samples Res. Microbiol. 1997, 148 (6) 534-6 (Pubitemid 27404887)
4. Corbisier, P.; van der Lelie, D.; Borremans, B.; Provoost, A.; de Lorenzo, V.; Brown, N. L.; Lloyd, J. R.; Hobman, J. L.; Csöregi, E.; Johansson, G.; Mattiasson, B. Whole cell- and protein-based biosensors for the detection of bioavailable heavy metals in environmental samples Anal. Chim. Acta 1999, 387 (3) 235-244 (Pubitemid 29172948)
5. Stocker, J.; Balluch, D.; Gsell, M.; Harms, H.; Feliciano, J.; Daunert, S.; Malik, K. A.; van der Meer, J. R. Development of a set of simple bacterial biosensors for quantitative and rapid measurements of arsenite and arsenate in potable water Environ. Sci. Technol. 2003, 37 (20) 4743-50 (Pubitemid 37266395)
6. Diesel, E.; Schreiber, M.; van der Meer, J. Development of bacteria-based bioassays for arsenic detection in natural waters Anal. Bioanal. Chem. 2009, 394 (3) 687-693
7. Burlage, R. S.; Sayler, G. S.; Larimer, F. Monitoring of naphthalene catabolism by bioluminescence with nah-lux transcriptional fusions J. Bacteriol. 1990, 172 (9) 4749-4757 (Pubitemid 20281918)
8. Guzzo, A.; Diorio, C.; DuBow, M. S. Transcription of the Escherichia coli fliC gene is regulated by metal ions Appl. Environ. Microbiol. 1991, 57 (8) 2255-2259
9. Stewart, G. S. A. B.; Williams, P. lux genes and the applications of bacterial bioluminescence J. Gen. Microbiol. 1992, 138 (7) 1289-1300
10. Meighen, E. Bacterial bioluminescence: organization, regulation, and application of the lux genes FASEB J. 1993, 7 (11) 1016-1022 (Pubitemid 23243443)
11. Corbisier, P.; Ji, G.; Nuyts, G.; Mergeay, M.; Silver, S. luxAB gene fusions with the arsenic and cadmium resistance operons of Staphylococcus aureus plasmid pI258 FEMS Microbiol. Lett. 1993, 110 (SV) 231-8 (Pubitemid 23180027)
12. Van der Meer, J. R.; Tropel, D.; Jaspers, M. Illuminating the detection chain of bacterial bioreporters Environ. Microbiol. 2004, 6 (10) 1005-20 (Pubitemid 39275255)
13. Erbe, J. L.; Adams, A. C.; Taylor, K. B.; Hall, L. M. Cyanobacteria carrying an smt-lux transcriptional fusion as biosensors for the detection of heavy metal cations J. Ind. Microbiol. 1996, 17 (2) 80-3
14. Riether, K.; Dollard, M.-A.; Billard, P. Assessment of heavy metal bioavailability using Escherichia coli zntAp::lux and copAp::lux-based biosensors Appl. Microbiol. Biotechnol. 2001, 57 (5) 712-716 (Pubitemid 34028268)
15. Ivask, A.; Rolova, T.; Kahru, A. A suite of recombinant luminescent bacterial strains for the quantification of bioavailable heavy metals and toxicity testing BMC Biotechnol. 2009, 9, 41
16. Ivask, A.; Virta, M.; Kahru, A. Construction and use of specific luminescent recombinant bacterial sensors for the assessment of bioavailable fraction of cadmium, zinc, mercury and chromium in the soil Soil Biol. Biochem. 2002, 34 (10) 1439-1447 (Pubitemid 35180909)
17. Kahru, A.; Ivask, A.; Kasemets, K.; Pollumaa, L.; Kurvet, I.; Francois, M.; Dubourguier, H. C. Biotests and biosensors in ecotoxicological risk assessment of field soils polluted with zinc, lead, and cadmium Environ. Toxicol. Chem. 2005, 24 (11) 2973-82 (Pubitemid 41500797)
18. Charrier, T.; Durand, M. J.;; Affi, M.;; Jouanneau, S.;; Gezekel, H.;; Thouand, G. Bacterial Bioluminescent Biosensor Characterisation for On-line Monitoring of Heavy Metals Pollutions in Waste Water Treatment Plant Effluents. In Biosensors; Serra, P. A., Ed.; INTECH: 2010; pp 179 - 206.
19. Hakkila, K.; Green, T.; Leskinen, P.; Ivask, A.; Marks, R.; Virta, M. Detection of bioavailable heavy metals in EILATox-Oregon samples using whole-cell luminescent bacterial sensors in suspension or immobilized onto fibre-optic tips J. Appl. Toxicol. 2004, 24 (5) 333-42 (Pubitemid 39409914)
20. Elad, T.; Benovich, E.; Magrisso, S.; Belkin, S. Toxicant identification by a luminescent bacterial bioreporter panel: application of pattern classification algorithms Environ. Sci. Technol. 2008, 42 (22) 8486-91
21. Durand, M. J.; Thouand, G.; Dancheva-Ivanova, T.; Vachon, P.; DuBow, M. Specific detection of organotin compounds with a recombinant luminescent bacteria Chemosphere 2003, 52 (1) 103-11 (Pubitemid 36566011)
22. Tauriainen, S.; Karp, M.; Chang, W.; Virta, M. Luminescent bacterial sensor for cadmium and lead Biosens. Bioelectron. 1998, 13 (9) 931-938 (Pubitemid 28506003)
23. Ivask, A.; Hakkila, K.; Virta, M. Detection of organomercurials with sensor bacteria Anal. Chem. 2001, 73 (21) 5168-71 (Pubitemid 33032232)
24. Mioni, C. E.; Howard, A. M.; DeBruyn, J. M.; Bright, N. G.; Twiss, M. R.; Applegate, B. M.; Wilhelm, S. W. Characterization and field trials of a bioluminescent bacterial reporter of iron bioavailability Mar. Chem. 2003, 83 (1-2) 31-46 (Pubitemid 37488704)
25. Brocklehurst, K. R.; Megit, S. J.; Morby, A. P. Characterisation of CadR from Pseudomonas aeruginosa: a Cd(II)-responsive MerR homologue Biochem. Biophys. Res. Commun. 2003, 308 (2) 234-9 (Pubitemid 36937171)
26. Magrisso, S.; Erel, Y.; Belkin, S. Microbial reporters of metal bioavailability Microb. Biotechnol. 2008, 1 (4) 320-330
27. Charrier, T.; Durand, M. J.; Jouanneau, S.; Dion, M.; Pernetti, M.; Poncelet, D.; Thouand, G., Development and validation of a polyvalent multichannel bioluminescent bacterial biosensor for on line detection of both toxicity and pollutants. Part I: Bioluminescent bacterial strains design and optimization. submitted to Anal. Bioanal. Chem. 2010.
28. Fernandez-Pinas, F.; Wolk, C. P. Expression of luxCD-E in Anabaena sp. can replace the use of exogenous aldehyde for in vivo localization of transcription by luxAB Gene 1994, 150 (1) 169-74 (Pubitemid 24359970)
29. Tom-Petersen, A.; Hosboond, C.; Nybroe, O. Identification of copper-induced genes in Pseudomonas fluorescens and use of a reporter strain to monitor bioavailable copper in soil FEMS Microbiol. Ecol. 2001, 38 (1) 59-67 (Pubitemid 34033721)
30. Stoyanov, J. V.; Magnani, D.; Solioz, M. Measurement of cytoplasmic copper, silver, and gold with a lux biosensor shows copper and silver, but not gold, efflux by the CopA ATPase of Escherichia coli FEBS Lett. 2003, 546 (2-3) 391-4 (Pubitemid 36782445)
31. Selifonova, O.; Burlage, R.; Barkay, T. Bioluminescent sensors for detection of bioavailable Hg(II) in the environment Appl. Environ. Microbiol. 1993, 59 (9) 3083-90 (Pubitemid 23267107)
32. Gambill, B. D.; Summers, A. O. Versatile mercury-resistant cloning and expression vectors Gene 1985, 39 (2-3) 293-7 (Pubitemid 16175761)
33. Wagner, L. W.; Van Dyk, T. K. Cryopreservation and reawakening Methods Mol. Biol. (Clifton, N.J.) 1998, 102, 123-127
34. Durand, M. J.; Thouand, G.; Dancheva-Ivanova, T.; Vachon, P.; DuBow, M. Specific detection of organotin compounds with a recombinant luminescent bacteria Chemosphere 2003, 52 (1) 103-111 (Pubitemid 36566011)
35. Kass, G. V. An Exploratory Technique for Investigating Large Quantities of Categorical Data Appl. Stat. 1980, 29 (2) 119-127
36. Rakotomalala, R. Arbres de Décision Modulad 2005, 33, 163-187
37. Belkin, S. Microbial whole-cell sensing systems of environmental pollutants Curr. Opin. Microbiol. 2003, 6 (3) 206-12 (Pubitemid 36841662)
38. Tauriainen, S.; Karp, M.; Chang, W.; Virta, M. Recombinant luminescent bacteria for measuring bioavailable arsenite and antimonite Appl. Environ. Microbiol. 1997, 63 (11) 4456-61 (Pubitemid 27485775)
39. Fu, Y.-J.; Chen, W.-L.; Huang, Q.-Y. Construction of two lux-tagged Hg2+-specific biosensors and their luminescence performance Appl. Microbiol. Biotechnol. 2008, 79 (3) 363-370