galectin-8-n-domain recognition mechanism for sialylated and sulfated glycans

Journal of Biological Chemistry

Volumn 286, Issue 13, 2011, Pages 11346-11355

  Ideo, Hiroko ^a   Matsuzaka, Tsutomu ^b,c   Nonaka, Takamasa ^b   Seko, Akira ^a,d   Yamashita, Katsuko ^a,e  

^a TOKYO INSTITUTE OF TECHNOLOGY   (Japan)

^b IWATE MEDICAL UNIVERSITY   (Japan)

^c NAGAOKA UNIVERSITY OF TECHNOLOGY   (Japan)

^d JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^e NONE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CARBOHYDRATE-RECOGNITION DOMAINS; CRITICAL AMINO ACIDS; GALECTIN-1; GALECTINS; GLYCANS; GLYCOBIOLOGY; GLYCOCONJUGATES; LEWIS X; LOOP REGIONS; N-TERMINALS; RECOGNITION MECHANISM; SIALIC ACID MOIETY; STRONG BINDING; VAN DER WAALS INTERACTIONS; X-RAY CRYSTALLOGRAPHIC ANALYSIS;

CARBOHYDRATES; CARBOXYLIC ACIDS; DIMERS; OLIGOSACCHARIDES; SURFACE PLASMON RESONANCE; VAN DER WAALS FORCES; X RAY CRYSTALLOGRAPHY;

AMINO ACIDS;

3'SIALYL; 3'SULFOLACTOSE; GALACTOSE; GALECTIN 1; GALECTIN 2; GALECTIN 8; GLYCAN DERIVATIVE; GLYCAN SULFATE; LACTOSE; SIALIC ACID DERIVATIVE; SIALYLATED GLYCAN; SULFATE; TYROSINE; UNCLASSIFIED DRUG;

AMINO ACID COMPOSITION; ARTICLE; BETA SHEET; BINDING AFFINITY; BINDING SITE; COMPLEX FORMATION; CONTROLLED STUDY; CRYSTAL STRUCTURE; DIMERIZATION; MOLECULAR DYNAMICS; MOLECULAR RECOGNITION; PRIORITY JOURNAL; PROTEIN CARBOHYDRATE INTERACTION; PROTEIN DOMAIN; PROTEIN FOLDING; STRUCTURE ACTIVITY RELATION;

CRYSTALLOGRAPHY, X-RAY; GALECTINS; HUMANS; OLIGOSACCHARIDES; PROTEIN STRUCTURE, QUATERNARY; PROTEIN STRUCTURE, TERTIARY; SURFACE PLASMON RESONANCE;

EID: 79953197242     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.195925     Document Type: Article

References (43)

1. Hadari, Y. R., Paz, K., Dekel, R., Mestrovic, T., Accili, D., and Zick, Y. (1995) J. Biol. Chem. 270, 3447-3453
2. Hadari, Y. R., Eisenstein, M., Zakut, R., and Zick, Y. (1997) Trends Glycosci. Glycotechnol. 9, 103-112
3. Barondes, S. H., Cooper, D. N., Gitt, M. A., and Leffler, H. (1994) J. Biol. Chem. 269, 20807-20810
4. Cooper, D. N., and Barondes, S. H. (1999) Glycobiology 9, 979-984
5. Levy, Y., Arbel-Goren, R., Hadari, Y. R., Eshhar, S., Ronen, D., Elhanany, E., Geiger, B., and Zick, Y. (2001) J. Biol. Chem. 276, 31285-31295
6. Arbel-Goren, R., Levy, Y., Ronen, D., and Zick, Y. (2005) J. Biol. Chem. 280, 19105-19114
7. Cárcamo, C., Pardo, E., Oyanadel, C., Bravo-Zehnder, M., Bull, P., Cáceres, M., Martínez, J., Massardo, L., Jacobelli, S., González, A., and Soza, A. (2006) Exp. Cell. Res. 312, 374-386
8. Zick, Y., Eisenstein, M., Goren, R. A., Hadari, Y. R., Levy, Y., and Ronen, D. (2004) Glycoconj. J. 19, 517-526
9. Ideo, H., Seko, A., Ishizuka, I., and Yamashita, K. (2003) Glycobiology 13, 713-723
10. Hirabayashi, J., Hashidate, T., Arata, Y., Nishi, N., Nakamura, T., Hirashima, M., Urashima, T., Oka, T., Futai, M., Muller, W. E., Yagi, F., and Kasai, K. (2002) Biochim. Biophys. Acta 1572, 232-254
11. Lobsanov, Y. D., Gitt, M. A., Leffler, H., Barondes, S. H., and Rini, J. M. (1993) J. Biol. Chem. 268, 27034-27038
12. Seetharaman, J., Kanigsberg, A., Slaaby, R., Leffler, H., Barondes, S. H., and Rini, J. M. (1998) J. Biol. Chem. 273, 13047-13052
13. Leonidas, D. D., Vatzaki, E. H., Vorum, H., Celis, J. E., Madsen, P., and Acharya, K. R. (1998) Biochemistry 37, 13930-13940
14. Swaminathan, G. J., Leonidas, D. D., Savage, M. P., Ackerman, S. J., and Acharya, K. R. (1999) Biochemistry 38, 13837-13843
15. Hirabayashi, J., and Kasai, K. (1994) Glycoconj. J. 11, 437-442
16. Ideo, H., Seko, A., and Yamashita, K. (2007) J. Biol. Chem. 282, 21081-21089
17. Seko, A., and Yamashita, K. (2005) Glycobiology 15, 943-951
18. Honke, K., Tsuda, M., Koyota, S., Wada, Y., Iida-Tanaka, N., Ishizuka, I., Nakayama, J., and Taniguchi, N. (2001) J. Biol. Chem. 276, 267-274
19. Seko, A., Nagata, K., Yonezawa, S., and Yamashita, K. (2002) Jpn. J. Cancer Res. 93, 507-515
20. Ishizuka, I. (1997) Prog. Lipid Res. 36, 245-319
21. Powell, H. R. (1999) Acta Crystallogr. D 55, 1690-1695
22. Evans, P. R. (2006) Acta Crystallogr. D 62, 72-82
23. Collaborative Computational Project No. 4 (1994) Acta Crystallogr. D 50, 760-763
24. Vonrhein, C., Blanc, E., Roversi, P., and Bricogne, G. (2006) in Macromolecular Crystallography Protocols (Doublie, S., ed) Vol. 2, pp. 215-230, Humana Press, Totowa, NJ
25. Schneider, T. R., and Sheldrick, G. M. (2002) Acta Crystallogr. D 58, 1772-1779
26. Bricogne, G., Vonrhein, C., Flensburg, C., Schiltz, M., and Paciorek, W. (2003) Acta Crystallogr. D 59, 2023-2030
27. Abrahams, J. P., and Leslie, A. G. (1996) Acta Crystallogr. D 52, 30-42
28. Lamzin, V. S., and Wilson, K. S. (1993) Acta Crystallogr. D 49, 129-147
29. McRee, D. E. (1992) J. Mol. Graph. 10, 44-46
30. Vagin, A., and Teplyakov, A. (1997) J. Appl. Crystallogr. 30, 1022-1025
31. Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Acta Crystallogr. D 53, 240-255
32. DeLano, W. L. (2002) The PyMOL Molecular Graphics System, DeLano Scientific, San Carlos, CA
33. Kabsch, W. (1976) Acta Crystallogr. Sect. A 32, 922-923
34. Ideo, H., Seko, A., Ohkura, T., Matta, K. L., and Yamashita, K. (2002) Glycobiology 12, 199-208
35. Liao, D. I., Kapadia, G., Ahmed, H., Vasta, G. R., and Herzberg, O. (1994) Proc. Natl. Acad. Sci. U.S.A. 91, 1428-1432
36. Nagae, M., Nishi, N., Murata, T., Usui, T., Nakamura, T., Wakatsuki, S., and Kato, R. (2006) J. Biol. Chem. 281, 35884-35893
37. Stowell, S. R., Arthur, C. M., Slanina, K. A., Horton, J. R., Smith, D. F., and Cummings, R. D. (2008) J. Biol. Chem. 283, 20547-20559
38. Rini, J. M. (1995) Annu. Rev. Biophys. Biomol. Struct. 24, 551-577
39. Warren, L (1976) in Biological Roles of Sialic Acid (Rosenberg, A., and Schengrund, C., eds) pp. 103-121, Plenum Press, New York
40. Suzuki, Y., Ito, T., Maejima, Y., Masuda, H., Horiike, G., Suzuki, T., Sato, K., Hanagata, G., Kiso, M., Hasegawa, A., Xu, G., Ito, T., Kawaoka, Y., and Webster, R. G. (1996) (Brown, L. E., Hampson, A. W., and Webster, R. G., eds) pp. 443-446, Elsevier Science B. V., Amsterdam
41. Brennan, M. J., Hannah, J. H., and Leininger, E. (1991) J. Biol. Chem. 266, 18827-18831
42. Suzuki, T., Sometani, A., Yamazaki, Y., Horiike, G., Mizutani, Y., Masuda, H., Yamada, M., Tahara, H., Xu, G., Miyamoto, D., Oku, N., Okada, S., Kiso, M., Hasegawa, A., Ito, T., Kawaoka, Y., and Suzuki, Y. (1996) Biochem. J. 318, 389-393
43. Teneberg, S., Miller-Podraza, H., Lampert, H. C., Evans, D. J., Jr., Evans, D. G., Danielsson, D., and Karlsson, K. A. (1997) J. Biol. Chem. 272, 19067-19071