-
1
-
-
0038392706
-
Bacteriophage observations and evolution
-
Ackermann, H. W. 2003. Bacteriophage observations and evolution. Res. Microbiol. 154:245-251.
-
(2003)
Res. Microbiol.
, vol.154
, pp. 245-251
-
-
Ackermann, H.W.1
-
2
-
-
0004078614
-
-
Intersciences Publishers, Inc., New York, NY
-
Adams, M. H. 1959. Bacteriophages. Intersciences Publishers, Inc., New York, NY.
-
(1959)
Bacteriophages
-
-
Adams, M.H.1
-
3
-
-
2942620419
-
Identification and analysis of novel tandem repeats in the cell surface proteins of archaeal and bacterial genomes using computational tools
-
Adindla, S., K. K. Inampudi, K. Guruprasd, and L. Guruprasad. 2004. Identification and analysis of novel tandem repeats in the cell surface proteins of archaeal and bacterial genomes using computational tools. Comp. Funct. Genomics 5:2-16.
-
(2004)
Comp. Funct. Genomics
, vol.5
, pp. 2-16
-
-
Adindla, S.1
Inampudi, K.K.2
Guruprasd, K.3
Guruprasad, L.4
-
4
-
-
0031584273
-
Head morphogenesis genes of the Bacillus subtilis bacteriophage SPP1
-
Becker, B., et al. 1997. Head morphogenesis genes of the Bacillus subtilis bacteriophage SPP1. J. Mol. Biol. 268:822-839.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 822-839
-
-
Becker, B.1
-
5
-
-
0031879633
-
Estimation of the state of the bacterial cell wall by fluorescent in situ hybridization
-
Bidnenko, E., C. Mercier, J. Tremblay, P. Tailliez, and S. Kulakauskas. 1998. Estimation of the state of the bacterial cell wall by fluorescent in situ hybridization. Appl. Environ. Microbiol. 64:3059-3062.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 3059-3062
-
-
Bidnenko, E.1
Mercier, C.2
Tremblay, J.3
Tailliez, P.4
Kulakauskas, S.5
-
6
-
-
22144437327
-
Phage therapy: the Escherichia coli experience
-
Brüssow, H. 2005. Phage therapy: the Escherichia coli experience. Microbiology 151:2133-2140.
-
(2005)
Microbiology
, vol.151
, pp. 2133-2140
-
-
Brüssow, H.1
-
7
-
-
0035153828
-
Comparative phage genomics and the evolution of Siphovirdae: insights from dairy phages
-
Brüssow, H., and F. Desiere. 2001. Comparative phage genomics and the evolution of Siphovirdae: insights from dairy phages. Mol. Microbiol. 39:213-222.
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 213-222
-
-
Brüssow, H.1
Desiere, F.2
-
8
-
-
0033966457
-
The terminase enzyme from bacteriophage lambda: a DNA-packaging machine
-
Catalano, C. E. 2000. The terminase enzyme from bacteriophage lambda: a DNA-packaging machine. Cell. Mol. Life Sci. 57:128-148.
-
(2000)
Cell. Mol. Life Sci.
, vol.57
, pp. 128-148
-
-
Catalano, C.E.1
-
9
-
-
49049121002
-
Genome sequence of the lytic bacteriophage P1201 from Corynebacterium glutamicum NCHU 87078: evolutionary relationships to phages from Corynebacterineae
-
Chen, C. L., et al. 2008. Genome sequence of the lytic bacteriophage P1201 from Corynebacterium glutamicum NCHU 87078: evolutionary relationships to phages from Corynebacterineae. Virology 378:226-232.
-
(2008)
Virology
, vol.378
, pp. 226-232
-
-
Chen, C.L.1
-
10
-
-
0028223308
-
The structure of bacteriophage T7 lysozyme, a zinc amidase and an inhibitor of T7 RNA polymerase
-
Cheng, X., X. Zhang, J. W. Pflugrath, and F. W. Studier. 1994. The structure of bacteriophage T7 lysozyme, a zinc amidase and an inhibitor of T7 RNA polymerase. Proc. Natl. Acad. Sci. U. S. A. 91:4034-4038.
-
(1994)
Proc. Natl. Acad. Sci. U. S. A.
, vol.91
, pp. 4034-4038
-
-
Cheng, X.1
Zhang, X.2
Pflugrath, J.W.3
Studier, F.W.4
-
11
-
-
33947378344
-
First complete genome sequence of two Staphylococcus epidermidis bacteriophages
-
Daniel, A., P. E. Bonnen, and V. A. Fischetti. 2007. First complete genome sequence of two Staphylococcus epidermidis bacteriophages. J. Bacteriol. 189:2086-2100.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 2086-2100
-
-
Daniel, A.1
Bonnen, P.E.2
Fischetti, V.A.3
-
12
-
-
79951576120
-
Foaming
-
R. Seviour and P. H. Nielsen (ed.), IWA Publishing, Norfolk, United Kingdom
-
de los Reyes, F. L. 2010. Foaming, p. 215-258. In R. Seviour and P. H. Nielsen (ed.), Microbial ecology of activated sludge. IWA Publishing, Norfolk, United Kingdom.
-
(2010)
Microbial ecology of activated sludge
, pp. 215-258
-
-
de los Reyes, F.L.1
-
13
-
-
0023664170
-
Activity of a Streptomyces transcriptional terminator in Escherichia coli
-
Deng, Z. X., T. Kieser, and D. A. Hopwood. 1987. Activity of a Streptomyces transcriptional terminator in Escherichia coli. Nucleic Acids Res. 15:2665-2675.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 2665-2675
-
-
Deng, Z.X.1
Kieser, T.2
Hopwood, D.A.3
-
14
-
-
78650469140
-
-
Biomatters Ltd., Auckland, New Zealand
-
Drummond, A. J., et al. 2010. Geneious v5.1. Biomatters Ltd., Auckland, New Zealand.
-
(2010)
Geneious v5.1
-
-
Drummond, A.J.1
-
15
-
-
75549090603
-
The Pfam protein families database
-
Finn, R. D., et al. 2010. The Pfam protein families database. Nucleic Acids Res. 38:D211-D222.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Finn, R.D.1
-
16
-
-
1642343784
-
Phylogenetic analysis of AAA proteins
-
Frickey, T., and A. N. Lupas. 2004. Phylogenetic analysis of AAA proteins. J. Struct. Biol. 146:2-10.
-
(2004)
J. Struct. Biol.
, vol.146
, pp. 2-10
-
-
Frickey, T.1
Lupas, A.N.2
-
17
-
-
0031218420
-
Phage DNA packaging
-
Fujisawa, H., and M. Morita. 1997. Phage DNA packaging. Genes Cells 2:537-545.
-
(1997)
Genes Cells
, vol.2
, pp. 537-545
-
-
Fujisawa, H.1
Morita, M.2
-
18
-
-
33646189650
-
The families Dietziaceae, Gordoniaceae, Nocardiaceae and Tsukamurellaceae
-
M. Dworkin, S. Flakow, E. Rosenberg, K. H. Schleifer, and E. Stackebrandt, (ed.)
-
Goodfellow, M., and L. A. Maldonado. 2006. The families Dietziaceae, Gordoniaceae, Nocardiaceae and Tsukamurellaceae, p. 843-888. In M. Dworkin, S. Flakow, E. Rosenberg, K. H. Schleifer, and E. Stackebrandt, (ed.), The prokaryotes, 3rd ed., vol. 3. Archaea. Bacteria: firmicutes, actinomycetes. Springer, New York, NY.
-
(2006)
The prokaryotes
, vol.3
, pp. 843-888
-
-
Goodfellow, M.1
Maldonado, L.A.2
-
19
-
-
49149113206
-
Comparative genomics of the mycobacteriophages: insights into bacteriophage evolution
-
Hatfull, G. F., S. G. Cresawn, and R. W. Hendrix. 2008. Comparative genomics of the mycobacteriophages: insights into bacteriophage evolution. Res. Microbiol. 159:332-339.
-
(2008)
Res. Microbiol.
, vol.159
, pp. 332-339
-
-
Hatfull, G.F.1
Cresawn, S.G.2
Hendrix, R.W.3
-
20
-
-
77249114108
-
Comparative genomic analysis of 60 mycobacteriophage geneomes: genome clustering, gene acquisition and gene size
-
Hatfull, G. F., et al. 2010. Comparative genomic analysis of 60 mycobacteriophage geneomes: genome clustering, gene acquisition and gene size. J. Mol. Biol. 397:119-143.
-
(2010)
J. Mol. Biol.
, vol.397
, pp. 119-143
-
-
Hatfull, G.F.1
-
21
-
-
33745698561
-
Expoloring the mycobacteriophage metaproteome: phage genomics as an educational platform
-
Hatfull, G. F., et al. 2006. Expoloring the mycobacteriophage metaproteome: phage genomics as an educational platform. PLoS Genet. 2:e92.
-
(2006)
PLoS Genet.
, vol.2
-
-
Hatfull, G.F.1
-
22
-
-
0015820033
-
Bacteriophage T7 lysozyme is a N-acetylmuramyl-L-alanine amidase
-
Inouye, M., N. Arnheim, and R. Sternglanz. 1973. Bacteriophage T7 lysozyme is a N-acetylmuramyl-L-alanine amidase. J. Biol. Chem. 248:7247-7252.
-
(1973)
J. Biol. Chem.
, vol.248
, pp. 7247-7252
-
-
Inouye, M.1
Arnheim, N.2
Sternglanz, R.3
-
23
-
-
0035061876
-
Tsukamurella strandjordae sp. nov., a proposed new species causing sepsis
-
Kattar, M. M., et al. 2001. Tsukamurella strandjordae sp. nov., a proposed new species causing sepsis. J. Clin. Microbiol. 39:1467-1476.
-
(2001)
J. Clin. Microbiol.
, vol.39
, pp. 1467-1476
-
-
Kattar, M.M.1
-
24
-
-
34250011722
-
Ecophysiology of mycolic acid-containing Actinobacteria (Mycolata) in activated sludge foams
-
Kragelund, C., et al. 2007. Ecophysiology of mycolic acid-containing Actinobacteria (Mycolata) in activated sludge foams. FEMS Micriobiol. Ecol. 61:174-184.
-
(2007)
FEMS Micriobiol. Ecol.
, vol.61
, pp. 174-184
-
-
Kragelund, C.1
-
25
-
-
1242297827
-
ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences
-
Laslett, D., and B. Canback. 2004. ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences. Nucleic Acids Res. 32:11-16.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 11-16
-
-
Laslett, D.1
Canback, B.2
-
26
-
-
0035444240
-
Prediction of rho-independent transcriptional terminators in Escherichia coli
-
Lesnik, E. A., et al. 2001. Prediction of rho-independent transcriptional terminators in Escherichia coli. Nucleic Acids Res. 29:3583-3594.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 3583-3594
-
-
Lesnik, E.A.1
-
27
-
-
0029893874
-
Mechanisms of helicase-catalysed DNA unwinding
-
Lohman, T. M., and K. P. Bjornson. 1996. Mechanisms of helicase-catalysed DNA unwinding. Annu. Rev. Biochem. 65:169-214.
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 169-214
-
-
Lohman, T.M.1
Bjornson, K.P.2
-
28
-
-
0034615568
-
Structure and function of the methionine aminopeptidases
-
Lowther, W. T., and B. W. Matthews. 2000. Structure and function of the methionine aminopeptidases. Biochim. Biophys. Acta 1477:157-167.
-
(2000)
Biochim. Biophys. Acta
, vol.1477
, pp. 157-167
-
-
Lowther, W.T.1
Matthews, B.W.2
-
29
-
-
77749303989
-
Sequence analysis of Leuconostoc mesenteroides bacteriophage 1-A4 isolated from an industrial vegetable fermentation
-
Lu, Z., E. Altermann, F. Breidt, and S. Kozyavkin. 2010. Sequence analysis of Leuconostoc mesenteroides bacteriophage 1-A4 isolated from an industrial vegetable fermentation. Appl. Environ. Microbiol. 76:1955-1966.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 1955-1966
-
-
Lu, Z.1
Altermann, E.2
Breidt, F.3
Kozyavkin, S.4
-
30
-
-
34247271405
-
DNA replication initiation: mechanisms and regulation in bacteria
-
Mott, M. L., and J. M. Berger. 2007. DNA replication initiation: mechanisms and regulation in bacteria. Nat. Rev. Microbiol. 5:343-354.
-
(2007)
Nat. Rev. Microbiol.
, vol.5
, pp. 343-354
-
-
Mott, M.L.1
Berger, J.M.2
-
31
-
-
4344573086
-
Tsukamurella pseudospumae sp. nov., a novel actinomycete isolated from activated sludge foam
-
Nam, S. W., W. Kim, J. Chun, and M. Goodfellow. 2004. Tsukamurella pseudospumae sp. nov., a novel actinomycete isolated from activated sludge foam. Int. J. Syst. Evol. Microbiol. 54:1209-1212.
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 1209-1212
-
-
Nam, S.W.1
Kim, W.2
Chun, J.3
Goodfellow, M.4
-
32
-
-
0025878222
-
Bidirectional promoter and terminator regions bracket mmr, a resistance gene embedded in the Streptomyces coelicolor A3(2) gene cluster encoding methylenomycin production
-
Neal, R. J., and K. F. Chater. 1991. Bidirectional promoter and terminator regions bracket mmr, a resistance gene embedded in the Streptomyces coelicolor A3(2) gene cluster encoding methylenomycin production. Gene 100: 75-83.
-
(1991)
Gene
, vol.100
, pp. 75-83
-
-
Neal, R.J.1
Chater, K.F.2
-
33
-
-
33846653147
-
Abundance, diversity, and dynamics of viruses on microorganisms in activated sludge processes
-
Otawa, K., et al. 2007. Abundance, diversity, and dynamics of viruses on microorganisms in activated sludge processes. Microb. Ecol. 53:143-152.
-
(2007)
Microb. Ecol.
, vol.53
, pp. 143-152
-
-
Otawa, K.1
-
34
-
-
67651229642
-
Mycobacteriophage lysine B is a novel mycolylarabinogalactan esterase
-
Payne, K., Q. Sun, J. Sacchettini, and G. F. Hatfull. 2009. Mycobacteriophage lysine B is a novel mycolylarabinogalactan esterase. Mol. Microbiol. 73:367-381.
-
(2009)
Mol. Microbiol.
, vol.73
, pp. 367-381
-
-
Payne, K.1
Sun, Q.2
Sacchettini, J.3
Hatfull, G.F.4
-
35
-
-
0037453742
-
Origins of highly mosaic mycobacteriophage genomes
-
Pedulla, M. L., et al. 2003. Origins of highly mosaic mycobacteriophage genomes. Cell 113:171-182.
-
(2003)
Cell
, vol.113
, pp. 171-182
-
-
Pedulla, M.L.1
-
36
-
-
34547886939
-
Comparative genomic analysis of mycobacteriophage Tweety: evolutionary insights and construction of compatible site-specific integration vectors for mycobacteria
-
Pham, T. T., D. Jacobs-Sera, M. L. Pedulla, R. W. Hendrix, and G. F. Hatfull. 2007. Comparative genomic analysis of mycobacteriophage Tweety: evolutionary insights and construction of compatible site-specific integration vectors for mycobacteria. Microbiology 153:2711-2723.
-
(2007)
Microbiology
, vol.153
, pp. 2711-2723
-
-
Pham, T.T.1
Jacobs-Sera, D.2
Pedulla, M.L.3
Hendrix, R.W.4
Hatfull, G.F.5
-
37
-
-
33751384637
-
Peptidoglycan hydrolase motif within the mycobacteriophage TM4 tape measure protein promotes efficient infection of stationary phase cells
-
Piuri, M., and G. F. A. Hatfull. 2006. Peptidoglycan hydrolase motif within the mycobacteriophage TM4 tape measure protein promotes efficient infection of stationary phase cells. Mol. Microbiol. 62:1569-1585.
-
(2006)
Mol. Microbiol.
, vol.62
, pp. 1569-1585
-
-
Piuri, M.1
Hatfull, G.F.A.2
-
38
-
-
57649226492
-
The bacteriophage DNA packaging motor
-
Rao, V. B., and M. Feiss. 2008. The bacteriophage DNA packaging motor. Annu. Rev. Genet. 42:647-681.
-
(2008)
Annu. Rev. Genet.
, vol.42
, pp. 647-681
-
-
Rao, V.B.1
Feiss, M.2
-
39
-
-
45449102484
-
Ecophysiology of the Actinobacteria in activated sludge systems
-
Seviour, R. J., et al. 2008. Ecophysiology of the Actinobacteria in activated sludge systems. Antonie Van Leeuwenhoek 94:21-33.
-
(2008)
Antonie Van Leeuwenhoek
, vol.94
, pp. 21-33
-
-
Seviour, R.J.1
-
41
-
-
2142676660
-
Foaming
-
R. J. Seviour and L. L. Blackall (ed.), Kluwer, Dordrecht, Netherlands
-
Soddell, J. A. 1999. Foaming, p. 161-202. In R. J. Seviour and L. L. Blackall (ed.), Microbiology of activated sludge. Kluwer, Dordrecht, Netherlands.
-
(1999)
Microbiology of activated sludge
, pp. 161-202
-
-
Soddell, J.A.1
-
42
-
-
0025179221
-
Microbiology of foaming in activated sludge plants-a review
-
Soddell, J. A., and R. J. Seviour. 1990. Microbiology of foaming in activated sludge plants-a review. J. Appl. Bacteriol. 69:145-176.
-
(1990)
J. Appl. Bacteriol.
, vol.69
, pp. 145-176
-
-
Soddell, J.A.1
Seviour, R.J.2
-
43
-
-
33645472180
-
The potential misidentification of Tsukamurella pulmonis as an atypical Mycobacterium species: a cautionary tale
-
Stanley, T., et al. 2006. The potential misidentification of Tsukamurella pulmonis as an atypical Mycobacterium species: a cautionary tale. J. Med. Microbiol. 55:475-478.
-
(2006)
J. Med. Microbiol.
, vol.55
, pp. 475-478
-
-
Stanley, T.1
-
44
-
-
0001344603
-
A study of bacteria associated with thirty species of insects
-
Steinhaus, E. A. 1941. A study of bacteria associated with thirty species of insects. J. Bacteriol. 42:757-790.
-
(1941)
J. Bacteriol.
, vol.42
, pp. 757-790
-
-
Steinhaus, E.A.1
-
45
-
-
79953222565
-
-
Ph.D. thesis. La Trobe University, Bendigo, Victoria, Australia
-
Thomas, J. A. 2005. Actinophages in activated sludge. Ph.D. thesis. La Trobe University, Bendigo, Victoria, Australia.
-
(2005)
Actinophages in activated sludge
-
-
Thomas, J.A.1
-
47
-
-
1942486000
-
Ecology of prokaryotic viruses
-
Weinbauer, M. G. 2004. Ecology of prokaryotic viruses. FEMS Microbiol. Rev. 28:127-181.
-
(2004)
FEMS Microbiol. Rev.
, vol.28
, pp. 127-181
-
-
Weinbauer, M.G.1
-
48
-
-
0031588022
-
Recognition and manipulation of branched DNA structure by junctionresolving enzymes
-
White, M. F., M. Giraud-Panis, J. R. G. Pöhler, and D. M. J. Lilley. 1997. Recognition and manipulation of branched DNA structure by junctionresolving enzymes. J. Mol. Biol. 269:647-664.
-
(1997)
J. Mol. Biol.
, vol.269
, pp. 647-664
-
-
White, M.F.1
Giraud-Panis, M.2
Pöhler, J.R.G.3
Lilley, D.M.J.4
-
49
-
-
14644440501
-
Bacteriophages potential for application in wastewater treatment processes
-
Withey, S. E., E. Cartmell, L. M. Avery, and T. Stephenson. 2005. Bacteriophages potential for application in wastewater treatment processes. Sci. Total Environ. 339:1-18.
-
(2005)
Sci. Total Environ.
, vol.339
, pp. 1-18
-
-
Withey, S.E.1
Cartmell, E.2
Avery, L.M.3
Stephenson, T.4
-
50
-
-
4944237752
-
Conserved translational frameshift in dsDNA bacteriophage tail assembly genes
-
Xu, J., R. W. Hendrix, and R. L. Duda. 2004. Conserved translational frameshift in dsDNA bacteriophage tail assembly genes. Mol. Cell 16:11-21.
-
(2004)
Mol. Cell
, vol.16
, pp. 11-21
-
-
Xu, J.1
Hendrix, R.W.2
Duda, R.L.3
-
51
-
-
70349399064
-
Decreasing Enterobacter sakazakii (Cronobacter spp.) food contamination level with bacteriophages: prospects and problems
-
Zuber, S., et al. 2008. Decreasing Enterobacter sakazakii (Cronobacter spp.) food contamination level with bacteriophages: prospects and problems. Microb. Biotechnol. 1:532-543.
-
(2008)
Microb. Biotechnol.
, vol.1
, pp. 532-543
-
-
Zuber, S.1
|