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Volumn 6577 LNBI, Issue , 2011, Pages 136-152

Pedigree Reconstruction Using Identity by Descent

Author keywords

[No Author keywords available]

Indexed keywords

ARTIFICIAL INTELLIGENCE; COMPUTER SCIENCE; COMPUTERS;

EID: 79953169472     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-20036-6_15     Document Type: Conference Paper
Times cited : (8)

References (36)
  • 1
    • 0036338150 scopus 로고    scopus 로고
    • Merlin-rapid analysis of dense genetic maps using sparse gene flow trees
    • Abecasis, G.R., Cherny, S.S., Cookson, W.O., Cardon, L.R.: Merlin-rapid analysis of dense genetic maps using sparse gene flow trees. Nature Genetics 30, 97–101 (2002)
    • (2002) Nature Genetics , vol.30 , pp. 97-101
    • Abecasis, G.R.1    Cherny, S.S.2    Cookson, W.O.3    Cardon, L.R.4
  • 3
    • 0030220115 scopus 로고    scopus 로고
    • Distribution of genome shared ibd by half-sibs: Approximation by the poisson clumping heuristic
    • Bickeboller, H., Thompson, E.A.: Distribution of genome shared ibd by half-sibs: Approximation by the poisson clumping heuristic. Theoretical Population Biology 50(1), 66–90 (1996)
    • (1996) Theoretical Population Biology , vol.50 , Issue.1 , pp. 66-90
    • Bickeboller, H.1    Thompson, E.A.2
  • 4
    • 0030881661 scopus 로고    scopus 로고
    • Accurate inference of relationships in sib-pair linkage studies
    • Boehnke, M., Cox, N.J.: Accurate inference of relationships in sib-pair linkage studies. American Journal of Human Genetics 61, 423–429 (1997)
    • (1997) American Journal of Human Genetics , vol.61 , pp. 423-429
    • Boehnke, M.1    Cox, N.J.2
  • 6
    • 78049476017 scopus 로고    scopus 로고
    • Discovering kinship through small subsets
    • Moulton, V., Singh, M. (eds.), Springer, Heidelberg
    • Brown, D., Berger-Wolf, T.: Discovering kinship through small subsets. In: Moulton, V., Singh, M. (eds.) WABI 2010. LNCS, vol. 6293, pp. 111–123. Springer, Heidelberg (2010)
    • (2010) WABI 2010. LNCS , vol.6293 , pp. 111-123
    • Brown, D.1    Berger-Wolf, T.2
  • 8
    • 39449116116 scopus 로고    scopus 로고
    • High-Resolution Mapping of Crossovers Reveals Extensive Variation in Fine-Scale Recombination Patterns Among Humans
    • Coop, G., Wen, X., Ober, C., Pritchard, J.K., Przeworski, M.: High-Resolution Mapping of Crossovers Reveals Extensive Variation in Fine-Scale Recombination Patterns Among Humans. Science 319(5868), 1395–1398 (2008)
    • (2008) Science , vol.319 , Issue.5868 , pp. 1395-1398
    • Coop, G.1    Wen, X.2    Ober, C.3    Pritchard, J.K.4    Przeworski, M.5
  • 9
    • 78049467782 scopus 로고    scopus 로고
    • Fixed-parameter algorithm for haplotype inferences on general pedigrees with small number of sites
    • Moulton, V., Singh, M. (eds.), Springer, Heidelberg
    • Doan, D., Evans, P.: Fixed-parameter algorithm for haplotype inferences on general pedigrees with small number of sites. In: Moulton, V., Singh, M. (eds.) WABI 2010. LNCS, vol. 6293, pp. 124–135. Springer, Heidelberg (2010)
    • (2010) WABI 2010. LNCS , vol.6293 , pp. 124-135
    • Doan, D.1    Evans, P.2
  • 10
    • 0020711374 scopus 로고
    • The probability that related individuals share some section of genome identical by descent
    • Donnelly, K.P.: The probability that related individuals share some section of genome identical by descent. Theoretical Population Biology 23(1), 34–63 (1983)
    • (1983) Theoretical Population Biology , vol.23 , Issue.1 , pp. 34-63
    • Donnelly, K.P.1
  • 11
    • 0015183542 scopus 로고
    • A general model for the analysis of pedigree data
    • Elston, R.C., Stewart, J.: A general model for the analysis of pedigree data. Human Heredity 21, 523–542 (1971)
    • (1971) Human Heredity , vol.21 , pp. 523-542
    • Elston, R.C.1    Stewart, J.2
  • 12
    • 18644375829 scopus 로고    scopus 로고
    • Maximum likelihood haplotyping for general pedigrees
    • Fishelson, M., Dovgolevsky, N., Geiger, D.: Maximum likelihood haplotyping for general pedigrees. Human Heredity 59, 41–60 (2005)
    • (2005) Human Heredity , vol.59 , pp. 41-60
    • Fishelson, M.1    Dovgolevsky, N.2    Geiger, D.3
  • 13
    • 37749045653 scopus 로고    scopus 로고
    • CFTR mutations and reproductive outcomes in a population isolate
    • Gallego Romero, I., Ober, C.: CFTR mutations and reproductive outcomes in a population isolate. Human Genet. 122, 583–588 (2008)
    • (2008) Human Genet , vol.122 , pp. 583-588
    • Gallego Romero, I.1    Ober, C.2
  • 14
    • 66349117419 scopus 로고    scopus 로고
    • Speeding up HMM algorithms for genetic linkage analysis via chain reductions of the state space
    • Geiger, D., Meek, C., Wexler, Y.: Speeding up HMM algorithms for genetic linkage analysis via chain reductions of the state space. Bioinformatics 25(12), i196 (2009)
    • (2009) Bioinformatics , vol.25 , Issue.12 , pp. i196
    • Geiger, D.1    Meek, C.2    Wexler, Y.3
  • 16
    • 78049461231 scopus 로고    scopus 로고
    • Haplotypes versus genotypes on pedigrees
    • Moulton, V., Singh, M. (eds.), Springer, Heidelberg
    • Kirkpatrick, B.: Haplotypes versus genotypes on pedigrees. In: Moulton, V., Singh, M. (eds.) WABI 2010. LNCS, vol. 6293, pp. 136–147. Springer, Heidelberg (2010)
    • (2010) WABI 2010. LNCS , vol.6293 , pp. 136-147
    • Kirkpatrick, B.1
  • 17
    • 85037528498 scopus 로고    scopus 로고
    • Pedigree reconstruction using identity by descent. Class project, Prof. Yun Song, 2008. Technical Report No
    • Kirkpatrick, B.: Pedigree reconstruction using identity by descent. Class project, Prof. Yun Song, 2008. Technical Report No. UCB/EECS-2010-43 (2010)
    • (2010) UCB/EECS-2010-43
    • Kirkpatrick, B.1
  • 20
    • 2542631175 scopus 로고    scopus 로고
    • Graphical models for genetic analysis
    • Lauritzen, S.L., Sheehan, N.A.: Graphical models for genetic analysis. Statistical Science 18(4), 489–514 (2003)
    • (2003) Statistical Science , vol.18 , Issue.4 , pp. 489-514
    • Lauritzen, S.L.1    Sheehan, N.A.2
  • 22
    • 77954184216 scopus 로고    scopus 로고
    • Efficient identification of identical-by-descent status in pedigrees with many untyped individuals
    • Li, X., Yin, X.-L., Li, J.: Efficient identification of identical-by-descent status in pedigrees with many untyped individuals. Bioinformatics 26(12), i191–i198 (2010)
    • (2010) Bioinformatics , vol.26 , Issue.12 , pp. i191-i198
    • Li, X.1    Yin, X.-L.2    Li, J.3
  • 23
    • 0028854229 scopus 로고
    • Modeling interference in genetic recombination
    • McPeek, M.S., Speed, T.P.: Modeling interference in genetic recombination. Genetics 139(2), 1031–1044 (1995)
    • (1995) Genetics , vol.139 , Issue.2 , pp. 1031-1044
    • McPeek, M.S.1    Speed, T.P.2
  • 24
    • 0033912689 scopus 로고    scopus 로고
    • Statistical tests for detection of misspecified relationships by use of genome-screen data
    • McPeek, M.S., Sun, L.: Statistical tests for detection of misspecified relationships by use of genome-screen data. Amer. J. Human Genetics 66, 1076–1094 (2000)
    • (2000) Amer. J. Human Genetics , vol.66 , pp. 1076-1094
    • McPeek, M.S.1    Sun, L.2
  • 25
    • 67651160485 scopus 로고    scopus 로고
    • Et al. Meta-analysis of 32 genome-wide linkage studies of schizophrenia
    • Ng, M.Y., Levinson, D.F.: et al. Meta-analysis of 32 genome-wide linkage studies of schizophrenia. Mol. Psychiatry 14, 774–785 (2009)
    • (2009) Mol. Psychiatry , vol.14 , pp. 774-785
    • Ng, M.Y.1    Levinson, D.F.2
  • 27
    • 77957753324 scopus 로고    scopus 로고
    • Inference of unexpected genetic relatedness among individuals in hapmap phase iii
    • Pemberton, T.J., Wang, C., Li, J.Z., Rosenberg, N.A.: Inference of unexpected genetic relatedness among individuals in hapmap phase iii. Am. J. Hum. Genet. 87(4), 457–464 (2010)
    • (2010) Am. J. Hum. Genet. , vol.87 , Issue.4 , pp. 457-464
    • Pemberton, T.J.1    Wang, C.2    Li, J.Z.3    Rosenberg, N.A.4
  • 28
    • 0242608428 scopus 로고    scopus 로고
    • On the complexity of fundamental computational problems in pedigree analysis
    • Piccolboni, A., Gusfield, D.: On the complexity of fundamental computational problems in pedigree analysis. Journal of Computational Biology 10(5), 763–773 (2003)
    • (2003) Journal of Computational Biology , vol.10 , Issue.5 , pp. 763-773
    • Piccolboni, A.1    Gusfield, D.2
  • 30
    • 0029945706 scopus 로고    scopus 로고
    • Descent graphs in pedigree analysis: Applications to haplotyping, location scores, and marker-sharing statistics
    • Sobel, E., Lange, K.: Descent graphs in pedigree analysis: Applications to haplotyping, location scores, and marker-sharing statistics. American Journal of Human Genetics 58(6), 1323–1337 (1996)
    • (1996) American Journal of Human Genetics , vol.58 , Issue.6 , pp. 1323-1337
    • Sobel, E.1    Lange, K.2
  • 32
    • 0036948344 scopus 로고    scopus 로고
    • Enhanced pedigree error detection
    • Sun, L., Wilder, K., McPeek, M.S.: Enhanced pedigree error detection. Hum. Hered. 54(2), 99–110 (2002)
    • (2002) Hum. Hered. , vol.54 , Issue.2 , pp. 99-110
    • Sun, L.1    Wilder, K.2    McPeek, M.S.3
  • 34
    • 40849140686 scopus 로고    scopus 로고
    • Reconstructing pedigrees: A stochastic perspective
    • Thatte, B.D., Steel, M.: Reconstructing pedigrees: A stochastic perspective. Journal of Theoretical Biology 251(3), 440–449 (2008)
    • (2008) Journal of Theoretical Biology , vol.251 , Issue.3 , pp. 440-449
    • Thatte, B.D.1    Steel, M.2
  • 36
    • 34547756415 scopus 로고    scopus 로고
    • Case-control association testing with related individuals: A more powerful quasi-likelihood score test
    • Thornton, T., McPeek, M.S.: Case-control association testing with related individuals: A more powerful quasi-likelihood score test. American Journal of Human Genetics 81, 321–337 (2007)
    • (2007) American Journal of Human Genetics , vol.81 , pp. 321-337
    • Thornton, T.1    McPeek, M.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.