Galactose recognition by a tetrameric C-type lectin, CEL-IV, containing the EPN carbohydrate recognition motif

Journal of Biological Chemistry

Volumn 286, Issue 12, 2011, Pages 10305-10315

  Hatakeyama, Tomomitsu ^a   Kamiya, Takuro ^a   Kusunoki, Masami ^b,d   Nakamura Tsuruta, Sachiko ^c   Hirabayashi, Jun ^c   Goda, Shuichiro ^a   Unno, Hideaki ^a  

^a NAGASAKI UNIVERSITY   (Japan)

^b OSAKA UNIVERSITY   (Japan)

^c NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^d UNIVERSITY OF YAMANASHI   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID RESIDUES; BINDING SPECIFICITIES; C-TYPE LECTINS; CARBOHYDRATE RECOGNITION; CARBOHYDRATE-RECOGNITION DOMAINS; FRONTAL AFFINITY CHROMATOGRAPHIES; GALACTOSE RESIDUES; INTERCHAIN DISULFIDE BONDS; INTRINSIC FLUORESCENCE; PREFERENTIAL BINDING; SEA CUCUMBER; SIDE CHAINS; STACKING INTERACTION; TETRAMERIC STRUCTURES; UV ABSORPTION SPECTRUM; X-RAY CRYSTALLOGRAPHIC ANALYSIS;

AFFINITY CHROMATOGRAPHY; AMINO ACIDS; BIOCHEMISTRY; CARBOHYDRATES; COMPLEXATION; COVALENT BONDS; GLUCOSE; LIGHT ABSORPTION; OLIGOSACCHARIDES; X RAY CRYSTALLOGRAPHY;

BINDING SITES;

ASPARAGINE; C TYPE LECTIN CEL IV; CARBOHYDRATE; GALACTOSE; GLUTAMIC ACID; LECTIN; MELIBIOSE; OLIGOSACCHARIDE; PROLINE; RAFFINOSE; UNCLASSIFIED DRUG;

AFFINITY CHROMATOGRAPHY; ARTICLE; BINDING AFFINITY; BINDING SITE; CONTROLLED STUDY; CRYSTALLIZATION; CUCUMARIA; CUCUMARIA ECHINATA; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN MOTIF; SITE DIRECTED MUTAGENESIS; STRUCTURE ANALYSIS; X RAY CRYSTALLOGRAPHY;

AMINO ACID MOTIFS; ANIMALS; BINDING SITES; CARBOHYDRATES; CRYSTALLOGRAPHY, X-RAY; CUCUMARIA; LECTINS, C-TYPE; PROTEIN STRUCTURE, TERTIARY; SUBSTRATE SPECIFICITY;

CUCUMARIA ECHINATA; HOLOTHUROIDEA;

EID: 79953166038     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.200576     Document Type: Article

References (43)

1. Kilpatrick, D. C. (2002) Biochim. Biophys. Acta 1572, 187-197
2. Drickamer, K. (1999) Curr. Opin. Struct. Biol. 9, 585-590
3. Zelensky, A. N., and Gready, J. E. (2005) FEBS J. 272, 6179-6217
4. Liu, Y. C., Li, F. H., Dong, B., Wang, B., Luan, W., Zhang, X. J., Zhang, L. S., and Xiang, J. H. (2007) Mol. Immunol. 44, 598-607
5. Hatakeyama, T., Unno, H., Kouzuma, Y., Uchida, T., Eto, S., Hidemura, H., Kato, N., Yonekura, M., and Kusunoki, M. (2007) J. Biol. Chem. 282, 37826-37835
6. Sugawara, H., Kusunoki, M., Kurisu, G., Fujimoto, T., Aoyagi, H., and Hatakeyama, T. (2004) J. Biol. Chem. 279, 45219-45225
7. Kuramoto, T., Uzuyama, H., Hatakeyama, T., Tamura, T., Nakashima, T., Yamaguchi, K., and Oda, T. (2005) J. Biochem. 137, 41-50
8. Yamanishi, T., Yamamoto, Y., Hatakeyama, T., Yamaguchi, K., and Oda, T. (2007) J. Biochem. 142, 587-595
9. Hatakeyama, T., Kohzaki, H., Nagatomo, H., and Yamasaki, N. (1994) J. Biochem. 116, 209-214
10. Drickamer, K. (1992) Nature 360, 183-186
11. Poget, S. F., Legge, G. B., Proctor, M. R., Butler, P. J., Bycroft, M., and Williams, R. L. (1999) J. Mol. Biol. 290, 867-879
12. Hatakeyama, T., Nagatomo, H., and Yamasaki, N. (1995) J. Biol. Chem. 270, 3560-3564
13. Otwinowski, Z., and Minor, W. (1997) Methods Enzymol. 276, 307-326
14. Collaborative Computational Project, N4 (1994) Acta Crystallogr. D Biol. Crystallogr. 50, 760-763
15. McCoy, A. J., Grosse-Kunstleve, R. W., Storoni, L. C., and Read, R. J. (2005) Acta Crystallogr. D Biol. Crystallogr. 61, 458-464
16. Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Acta Crystallogr. D Biol. Crystallogr. 53, 240-255
17. Emsley, P., and Cowtan, K. (2004) Acta Crystallogr. D Biol. Crystallogr. 60, 2126-2132
18. Laskowski, R., MacArthur, M., Moss, D., and Thornton, J. (1993) J. Appl. Crystallogr. 26, 283-291
19. DeLano, W. L. (2002) The PyMOL Molecular Graphics System, DeLano Scientific LLC, San Carlos, CA
20. Hatakeyama, T., Hozawa, T., Hirotani, I., Tsuda, N., Kusunoki, M., and Shiba, K. (2006) Biochim. Biophys. Acta 1760, 318-325
21. Hirabayashi, J. (2004) Glycoconj. J. 21, 35-40
22. Nakamura, S., Yagi, F., Totani, K., Ito, Y., and Hirabayashi, J. (2005) FEBS J. 272, 2784-2799
23. Gourdine, J. P., Cioci, G., Miguet, L., Unverzagt, C., Silva, D. V., Varrot, A., Gautier, C., Smith-Ravin, E. J., and Imberty, A. (2008) J. Biol. Chem. 283, 30112-30120
24. Ng, K. K., Kolatkar, A. R., Park-Snyder, S., Feinberg, H., Clark, D. A., Drickamer, K., and Weis, W. I. (2002) J. Biol. Chem. 277, 16088-16095
25. Tasumi, S., Ohira, T., Kawazoe, I., Suetake, H., Suzuki, Y., and Aida, K. (2002) J. Biol. Chem. 277, 27305-27311
26. Hosono, M., Sugawara, S., Ogawa, Y., Kohno, T., Takayanagi, M., and Nitta, K. (2005) Biochim. Biophys. Acta 1725, 160-173
27. Cowgill, R. W. (1967) Biochim. Biophys. Acta 133, 6-18
28. Yanari, S., and Bovey, F. A. (1960) J. Biol. Chem. 235, 2818-2826
29. Yamasaki, N., Hatakeyama, T., and Funatsu, G. (1985) J. Biochem. 98, 1555-1560
30. Iobst, S. T., and Drickamer, K. (1994) J. Biol. Chem. 269, 15512-15519
31. Uchida, T., Yamasaki, T., Eto, S., Sugawara, H., Kurisu, G., Nakagawa, A., Kusunoki, M., and Hatakeyama, T. (2004) J. Biol. Chem. 279, 37133-37141
32. Hazes, B. (1996) Protein Sci. 5, 1490-1501
33. Olsnes, S. (2004) Toxicon 44, 361-370
34. Endo, Y., Tsurugi, K., Yutsudo, T., Takeda, Y., Ogasawara, T., and Igarashi, K. (1988) Eur. J. Biochem. 171, 45-50
35. Liu, B., Xu, X. C., Cheng, Y., Huang, J., Liu, Y. H., Liu, Z., Min, M. W., Bian, H. J., Chen, J., and Bao, J. K. (2008) BMB Rep. 41, 369-375
36. SundarRaj, S., Soni, C., and Karande, A. A. (2009) Mol. Immunol. 46, 3411-3419
37. Kuroda, J., Yamamoto, M., Nagoshi, H., Kobayashi, T., Sasaki, N., Shimura, Y., Horiike, S., Kimura, S., Yamauchi, A., Hirashima, M., and Taniwaki, M. (2010) Mol. Cancer Res. 8, 994-1001
38. Lehotzky, R. E., Partch, C. L., Mukherjee, S., Cash, H. L., Goldman, W. E., Gardner, K. H., and Hooper, L. V. (2010) Proc. Natl. Acad. Sci. U.S.A. 107, 7722-7727
39. Ho, M. R., Lou, Y. C., Wei, S. Y., Luo, S. C., Lin, W. C., Lyu, P. C., and Chen, C. (2010) J. Mol. Biol. 402, 682-695
40. Hatakeyama, T., Ohuchi, K., Kuroki, M., and Yamasaki, N. (1995) Biosci. Biotechnol. Biochem. 59, 1314-1317
41. Hatakeyama, T., Matsuo, N., Shiba, K., Nishinohara, S., Yamasaki, N., Sugawara, H., and Aoyagi, H. (2002) Biosci. Biotechnol. Biochem. 66, 157-163
42. Suzuki, T., Takagi, T., Furukohri, T., Kawamura, K., and Nakauchi, M. (1990) J. Biol. Chem. 265, 1274-1281
43. Drickamer, K., Dordal, M. S., and Reynolds, L. (1986) J. Biol. Chem. 261, 6878-6887