메뉴 건너뛰기




Volumn 106, Issue 4, 2011, Pages 625-632

The computer program STRUCTURE does not reliably identify the main genetic clusters within species: Simulations and implications for human population structure

Author keywords

evolutionary tree, humans; population genetics; population structure; STRUCTURE

Indexed keywords

AFRICAN AMERICAN; DIVERGENCE; NUMERICAL MODEL; POPULATION GENETICS; POPULATION STRUCTURE; SOFTWARE;

EID: 79953123367     PISSN: 0018067X     EISSN: 13652540     Source Type: Journal    
DOI: 10.1038/hdy.2010.95     Document Type: Article
Times cited : (306)

References (27)
  • 1
    • 62349132559 scopus 로고    scopus 로고
    • Enhanced Bayesian modeling in BAPS software for learning genetic structures of populations
    • Corander J, Marttinen P, Siren J, Tang J (2008). Enhanced Bayesian modeling in BAPS software for learning genetic structures of populations. BMC Bioinformatics 9:539.
    • (2008) BMC Bioinformatics , vol.9 , pp. 539
    • Corander, J.1    Marttinen, P.2    Siren, J.3    Tang, J.4
  • 2
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • DOI 10.1111/j.1365-294X.2005.02553.x
    • Evanno G, Regnaut S, Goudet J (2005). Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14:2611-2620. (Pubitemid 40886055)
    • (2005) Molecular Ecology , vol.14 , Issue.8 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 3
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data: Linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK (2003). Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164:1567-1587. (Pubitemid 37102217)
    • (2003) Genetics , vol.164 , Issue.4 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 4
    • 68949103876 scopus 로고    scopus 로고
    • Inferring weak population structure with the assistance of sample group information
    • Hubisz MJ, Falush D, Stephens M, Pritchard JK (2009). Inferring weak population structure with the assistance of sample group information. Mol Ecol Resources 9:1322-1332.
    • (2009) Mol. Ecol. Resources , vol.9 , pp. 1322-1332
    • Hubisz, M.J.1    Falush, D.2    Stephens, M.3    Pritchard, J.K.4
  • 5
    • 0034619822 scopus 로고    scopus 로고
    • Mitochondrial genome variation and the origin of modem humans
    • DOI 10.1038/35047064
    • Ingman M, Kaessmann H, Paabo S, Gyllensten U (2000). Mitochondrial genome variation and the origin of modern humans. Nature 408:708-713. (Pubitemid 32015984)
    • (2000) Nature , vol.408 , Issue.6813 , pp. 708-713
    • Ingman, M.1    Kaessmann, H.2    Paabo, S.3    Gyllensten, U.4
  • 6
    • 67349175998 scopus 로고    scopus 로고
    • How well do evolutionary trees describe genetic relationships between populations?
    • Kalinowski ST (2009). How well do evolutionary trees describe genetic relationships between populations? Heredity 102:506-513.
    • (2009) Heredity , vol.102 , pp. 506-513
    • Kalinowski, S.T.1
  • 7
    • 0035051254 scopus 로고    scopus 로고
    • Population structure of atlantic salmon (Salmo salar l.): A range-wide perspective from microsatellite DNA variation
    • DOI 10.1046/j.1365-294X.2001.01231.x
    • King TL, Kalinowski ST, Schill WB, Spidle AP, Lubinski BA (2001). Population structure of Atlantic salmon (Salmo salar L.): a range-wide perspective from microsatellite DNA variation. Mol Ecol 10:807-821. (Pubitemid 32406384)
    • (2001) Molecular Ecology , vol.10 , Issue.4 , pp. 807-821
    • King, T.L.1    Kalinowski, S.T.2    Schill, W.B.3    Spidle, A.P.4    Lubinski, B.A.5
  • 8
    • 34547860403 scopus 로고    scopus 로고
    • Going the distance: Human population genetics in a clinal world
    • DOI 10.1016/j.tig.2007.07.002, PII S0168952507002326
    • Lawson Handley LJ, Manica A, Goudet J, Balloux F (2007). Going the distance: human population genetics in a clinical world. Trends Genet 9:432-439. (Pubitemid 47259574)
    • (2007) Trends in Genetics , vol.23 , Issue.9 , pp. 432-439
    • Handley, L.J.L.1    Manica, A.2    Goudet, J.3    Balloux, F.4
  • 9
    • 30744478949 scopus 로고    scopus 로고
    • Geography is a better determinant of human genetic differentiation than ethnicity
    • DOI 10.1007/s00439-005-0039-3
    • Manica M, Prugnolle F, Balloux F (2005). Geography is a better determinant of human genetic differentiation than ethnicity. Hum Genet 118:366-371. (Pubitemid 43091208)
    • (2005) Human Genetics , vol.118 , Issue.3-4 , pp. 366-371
    • Manica, A.1    Prugnolle, F.2    Balloux, F.3
  • 10
    • 0018147653 scopus 로고
    • Estimation of average heterozygosity and genetic distance from a small number of individuals
    • Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583-590. (Pubitemid 8396073)
    • (1978) Genetics , vol.89 , Issue.3 , pp. 583-590
    • Nei, M.1
  • 13
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P (2000). Inference of population structure using multilocus genotype data. Genetics 155:945-959. (Pubitemid 30397141)
    • (2000) Genetics , vol.155 , Issue.2 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 15
    • 1342331102 scopus 로고    scopus 로고
    • DISTRUCT: A program for the graphical display of population structure
    • DOI 10.1046/j.1471-8286.2003.00566.x
    • Rosenberg NA (2004). DISTRUCT: a program for the graphical display of population structure. Mol Ecol Notes 4:137-138. (Pubitemid 38261335)
    • (2004) Molecular Ecology Notes , vol.4 , Issue.1 , pp. 137-138
    • Rosenberg, N.A.1
  • 19
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 20
    • 40049105709 scopus 로고    scopus 로고
    • Inference of population structure using genetic markers and a Bayesian model averaging approach for clustering
    • Santafé G, Lozano JA, Larraño P (2008). Inference of population structure using genetic markers and a Bayesian model averaging approach for clustering. J Comput Biol 15:207-220.
    • (2008) J. Comput. Biol. , vol.15 , pp. 207-220
    • Santafé, G.1    Lozano, J.A.2    Larraño, P.3
  • 21
    • 61849171932 scopus 로고    scopus 로고
    • Why sampling scheme matters: The effect of sampling scheme on landscape genetic results
    • Schwartz MK, McKelvey KS (2008). Why sampling scheme matters: the effect of sampling scheme on landscape genetic results. Conservation Genet 10:441-452.
    • (2008) Conservation Genet. , vol.10 , pp. 441-452
    • Schwartz, M.K.1    McKelvey, K.S.2
  • 23
    • 43049180910 scopus 로고    scopus 로고
    • Use of y chromosome and mitochondrial DNA population structure in tracing human migrations
    • Underhill PA, Kivisild T (2007). Use of y chromosome and mitochondrial DNA population structure in tracing human migrations. Annu Rev Genet 41:539-564.
    • (2007) Annu. Rev. Genet. , vol.41 , pp. 539-564
    • Underhill, P.A.1    Kivisild, T.2
  • 24
    • 41549084695 scopus 로고    scopus 로고
    • New developments in the genetic evidence for modern human origins
    • DOI 10.1002/evan.20161
    • Weaver TD, Roseman CC (2008). New developments in the genetic evidence for modern human origins. Evol Anthropol 17:69-80. (Pubitemid 351462523)
    • (2008) Evolutionary Anthropology , vol.17 , Issue.1 , pp. 69-80
    • Weaver, T.D.1    Roseman, C.C.2
  • 25
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC (1984). Estimating F-statistics for the analysis of population structure. Evolution 38:1358-1370. (Pubitemid 16277759)
    • (1984) Evolution , vol.38 , Issue.6 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 26
    • 41349097940 scopus 로고    scopus 로고
    • Tree-guided Bayesian inference of population structures
    • DOI 10.1093/bioinformatics/btn070
    • Zhang Y (2008). Tree-guided Bayesian inference of population structures. Bioinformatics 24:965-971. (Pubitemid 351448031)
    • (2008) Bioinformatics , vol.24 , Issue.7 , pp. 965-971
    • Zhang, Y.1
  • 27
    • 0038744254 scopus 로고    scopus 로고
    • Features of evolution and expansion of modern humans, inferred from genomewide microsatellite markers
    • DOI 10.1086/375120
    • Zhivotovsky LA, Rosenberg NA, Feldman MW (2003). Features of evolution and expansion of modern humans, inferred from genome wide microsatellite markers. Am J Hum Genet 72:1171-1186. (Pubitemid 36530005)
    • (2003) American Journal of Human Genetics , vol.72 , Issue.5 , pp. 1171-1186
    • Zhivotovsky, L.A.1    Rosenberg, N.A.2    Feldman, M.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.