메뉴 건너뛰기




Volumn 26, Issue 1, 2011, Pages 1-6

Contribution of anammox bacteria to benthic nitrogen cycling in a mangrove forest and shrimp ponds, Haiphong, Vietnam

Author keywords

16s rrna gene; 15N tracer; Anammox; Aquaculture; Mangrove sediment

Indexed keywords

NITROGEN; QUATERNARY AMMONIUM DERIVATIVE;

EID: 79953048923     PISSN: 13426311     EISSN: 13426311     Source Type: Journal    
DOI: 10.1264/jsme2.ME10150     Document Type: Article
Times cited : (59)

References (37)
  • 2
    • 37849042824 scopus 로고    scopus 로고
    • Detection of anammox activity and diversity of anammox bacteria-related 16S rRNA genes in coastal marine sediment in Japan
    • Amano, T., I. Yoshinaga, K. Okada, T. Yamagishi, S. Ueda, A. Obuchi, Y. Sako, and Y. Suwa. 2007. Detection of anammox activity and diversity of anammox bacteria-related 16S rRNA genes in coastal marine sediment in Japan. Microbes Environ. 22:232-242.
    • (2007) Microbes Environ , vol.22 , pp. 232-242
    • Amano, T.1    Yoshinaga, I.2    Okada, K.3    Yamagishi, T.4    Ueda, S.5    Obuchi, A.6    Sako, Y.7    Suwa, Y.8
  • 5
    • 65349094528 scopus 로고    scopus 로고
    • Biogeographical distribution of diverse anaerobic ammonium oxidizing (anammox) bacteria in Cape Fear River Estuary
    • Dale, O., C. Tobias, and B. Song. 2009. Biogeographical distribution of diverse anaerobic ammonium oxidizing (anammox) bacteria in Cape Fear River Estuary. Environ. Microbiol. 11:1194-1207.
    • (2009) Environ. Microbiol , vol.11 , pp. 1194-1207
    • Dale, O.1    Tobias, C.2    Song, B.3
  • 6
    • 18144382963 scopus 로고    scopus 로고
    • Anaerobic ammonium oxidation (anammox) in the marine environment
    • Dalsgaard, T., B. Thamdrup, and D.E. Canfield. 2005. Anaerobic ammonium oxidation (anammox) in the marine environment. Res. Microbiol. 156:457-464.
    • (2005) Res. Microbiol , vol.156 , pp. 457-464
    • Dalsgaard, T.1    Thamdrup, B.2    Canfield, D.E.3
  • 7
    • 36649038040 scopus 로고    scopus 로고
    • Molecular characterization of diazotrophic and denitrifying bacteria associated with mangrove roots
    • Flores-Mireles, A.L., S.C. Winans, and G. Holguin. 2007. Molecular characterization of diazotrophic and denitrifying bacteria associated with mangrove roots. Appl. Environ. Microbiol. 73:7308-7321.
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 7308-7321
    • Flores-Mireles, A.L.1    Winans, S.C.2    Holguin, G.3
  • 8
    • 0032527462 scopus 로고    scopus 로고
    • Nitrogen biogeochemistry of aquaculture ponds
    • Hargreaves, J.A. 1998. Nitrogen biogeochemistry of aquaculture ponds. Aquaculture 166:181-212.
    • (1998) Aquaculture , vol.166 , pp. 181-212
    • Hargreaves, J.A.1
  • 9
    • 0035037353 scopus 로고    scopus 로고
    • The role of sediment microorganisms in the productivity, conservation, and rehabilitation of mangrove ecosystems: An overview
    • Holguin, G., P. Vazquez, and Y. Bashan. 2001. The role of sediment microorganisms in the productivity, conservation, and rehabilitation of mangrove ecosystems: An overview. Biol. Fertil. Soils 33:265- 278.
    • (2001) Biol. Fertil. Soils , vol.33 , pp. 265-278
    • Holguin, G.1    Vazquez, P.2    Bashan, Y.3
  • 10
    • 9144256012 scopus 로고    scopus 로고
    • Anaerobic ammonium oxidation by marine and freshwater planctomycete-like bacteria
    • Jetten, M.S.M., O. Sliekers, M. Kuypers, et al. 2003. Anaerobic ammonium oxidation by marine and freshwater planctomycete-like bacteria. Appl. Microbiol. Biotechnol. 63:107-114.
    • (2003) Appl. Microbiol. Biotechnol , vol.63 , pp. 107-114
    • Jetten, M.S.M.1    Sliekers, O.2    Kuypers, M.3
  • 12
    • 33750311308 scopus 로고    scopus 로고
    • Adaptation of a freshwater anammox population to high salinity wastewater
    • Kartal, B., M. Koleva, R. Arsov, W. van der Star, M.S.M. Jetten, and M. Strous. 2006. Adaptation of a freshwater anammox population to high salinity wastewater. J. Bacteriol. 126:546-553.
    • (2006) J. Bacteriol , vol.126 , pp. 546-553
    • Kartal, B.1    Koleva, M.2    Arsov, R.3    Star, W.V.D.4    Jetten, M.S.M.5    Strous, M.6
  • 13
    • 16644376320 scopus 로고    scopus 로고
    • Biology of mangroves and mangrove ecosystems
    • Kathiresan, K., and B.L. Bingham. 2001. Biology of mangroves and mangrove ecosystems. Adv. Mar. Biol. 40:81-251.
    • (2001) Adv. Mar. Biol , vol.40 , pp. 81-251
    • Kathiresan, K.1    Bingham, B.L.2
  • 14
    • 60449094818 scopus 로고    scopus 로고
    • Anammox in tidal marsh sediments: The role of salinity, nitrogen loading, and marsh vegetation
    • Koop-Jakobsen, K., and A.E. Giblin. 2009. Anammox in tidal marsh sediments: The role of salinity, nitrogen loading, and marsh vegetation. Estuaries Coasts 32:238-245.
    • (2009) Estuaries Coasts , vol.32 , pp. 238-245
    • Koop-Jakobsen, K.1    Giblin, A.E.2
  • 16
    • 42049092158 scopus 로고    scopus 로고
    • Porewater biogeochemistry and soil metabolism in dwarf red mangrove habitats (Twin Cays, Belize)
    • Lee, R.Y., W.P. Porubsky, I.C. Feller, K.L. McKee, and S.B. Joye. 2008. Porewater biogeochemistry and soil metabolism in dwarf red mangrove habitats (Twin Cays, Belize). Biogeochemistry 87:181- 198.
    • (2008) Biogeochemistry , vol.87 , pp. 181-198
    • Lee, R.Y.1    Porubsky, W.P.2    Feller, I.C.3    McKee, K.L.4    Joye, S.B.5
  • 17
    • 23744484512 scopus 로고    scopus 로고
    • Correlation between anammox activity and microscale distribution of nitrite in a subtropical mangrove sediment
    • Meyer, R.L., N. Risgaard-Petersen, and D.E. Allen. 2005. Correlation between anammox activity and microscale distribution of nitrite in a subtropical mangrove sediment. Appl. Environ. Microbiol. 71:6142- 6149.
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 6142-6149
    • Meyer, R.L.1    Risgaard-Petersen, N.2    Allen, D.E.3
  • 18
    • 33750042897 scopus 로고    scopus 로고
    • Molecular evidence for the broad distribution of anaerobic ammonium-oxidizing bacteria in freshwater and marine sediments
    • Penton, C.R., A.H. Devol, and J.M. Tiedje. 2006. Molecular evidence for the broad distribution of anaerobic ammonium-oxidizing bacteria in freshwater and marine sediments. Appl. Environ. Microbiol. 72:6829-6832.
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 6829-6832
    • Penton, C.R.1    Devol, A.H.2    Tiedje, J.M.3
  • 19
    • 38649094238 scopus 로고    scopus 로고
    • Anaerobic ammonium oxidation (Anammox) in Chesapeake Bay sediments
    • Rich, J.J., O.R. Dale, B. Song, and B.B. Ward. 2008. Anaerobic ammonium oxidation (Anammox) in Chesapeake Bay sediments. Microb. Ecol. 55:311-320.
    • (2008) Microb. Ecol , vol.55 , pp. 311-320
    • Rich, J.J.1    Dale, O.R.2    Song, B.3    Ward, B.B.4
  • 20
    • 0000059262 scopus 로고
    • Mangroves as filters of shrimp pond effluent: Predictions and biogeochemical research needs
    • Robertson, A.I., and M.J. Phillips. 1995. Mangroves as filters of shrimp pond effluent: Predictions and biogeochemical research needs. Hydrobiologia 295:311-321.
    • (1995) Hydrobiologia , vol.295 , pp. 311-321
    • Robertson, A.I.1    Phillips, M.J.2
  • 21
    • 0023375195 scopus 로고
    • The neighbor-joining method-a new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method-a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406- 425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 22
    • 15444362001 scopus 로고    scopus 로고
    • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
    • Schloss, P.D., and J. Handelsman. 2005. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl. Environ. Microbiol. 71:1501- 1506.
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 1501-1506
    • Schloss, P.D.1    Handelsman, J.2
  • 24
    • 10744230197 scopus 로고    scopus 로고
    • Candidatus "Scalindua brodae", sp. nov., Candidatus "Scalindua wagneri", sp. nov., two new species of anaerobic ammonium oxidizing bacteria
    • Schmid, M., K. Walsh, R. Webb, et al. 2003. Candidatus "Scalindua brodae", sp. nov., Candidatus "Scalindua wagneri", sp. nov., two new species of anaerobic ammonium oxidizing bacteria. Syst. Appl. Microbiol. 26:529-538.
    • (2003) Syst. Appl. Microbiol , vol.26 , pp. 529-538
    • Schmid, M.1    Walsh, K.2    Webb, R.3
  • 25
    • 20244376481 scopus 로고    scopus 로고
    • Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria
    • Schmid, M.C., B. Maas, A. Dapena, et al. 2005. Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria. Appl. Environ. Microbiol. 71:1677-1684.
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 1677-1684
    • Schmid, M.C.1    Maas, B.2    Dapena, A.3
  • 26
    • 34248587996 scopus 로고    scopus 로고
    • Anaerobic ammonium-oxidizing bacteria in marine environments: Widespread occurrence but low diversity
    • Schmid, M.C., N. Risgaard-Petersen, J. van de Vossenberg, et al. 2007. Anaerobic ammonium-oxidizing bacteria in marine environments: Widespread occurrence but low diversity. Environ. Microbiol. 9:1476-1484.
    • (2007) Environ. Microbiol , vol.9 , pp. 1476-1484
    • Schmid, M.C.1    Risgaard-Petersen, N.2    Vossenberg, J.V.D.3
  • 27
    • 33646080363 scopus 로고    scopus 로고
    • Anaerobic ammonium-oxidizing (anammox) bacteria and associated activity in fixed-film biofilters of a marine recirculating aquaculture system
    • Tal, Y., J.E. Watts, and H.J. Schreier. 2006. Anaerobic ammonium-oxidizing (anammox) bacteria and associated activity in fixed-film biofilters of a marine recirculating aquaculture system. Appl. Environ. Microbiol. 72:2896-2904.
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 2896-2904
    • Tal, Y.1    Watts, J.E.2    Schreier, H.J.3
  • 28
    • 0036197004 scopus 로고    scopus 로고
    • 2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments
    • Thamdrup, B., and T. Dalsgaard. 2002. Production of N2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments. Appl. Environ. Microbiol. 68:1312-1318.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 1312-1318
    • Thamdrup, B.1    Dalsgaard, T.2
  • 29
    • 33845879897 scopus 로고    scopus 로고
    • Direct measurement of anaerobic ammonium oxidation (anammox) and denitrification in intact sediment cores
    • Trimmer, M., N. Risgaard-Petersen, J.C. Nicholls, and P. Engstrom. 2006. Direct measurement of anaerobic ammonium oxidation (anammox) and denitrification in intact sediment cores. Mar. Ecol. Prog. Ser. 326:37-47.
    • (2006) Mar. Ecol. Prog. Ser , vol.326 , pp. 37-47
    • Trimmer, M.1    Risgaard-Petersen, N.2    Nicholls, J.C.3    Engstrom, P.4
  • 32
    • 33744927902 scopus 로고    scopus 로고
    • The Planctomycetes, Verruco-microbia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance
    • Wagner, M., and M. Horn. 2006. The Planctomycetes, Verruco-microbia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance. Curr. Opin. Biotechnol. 17:241-249.
    • (2006) Curr. Opin. Biotechnol , vol.17 , pp. 241-249
    • Wagner, M.1    Horn, M.2
  • 34
    • 52949102049 scopus 로고    scopus 로고
    • A microdiver-sity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones
    • Woebken, D., P. Lam, M.M. Kuypers, S.W. Naqvi, B. Kartal, M. Strous, M.S. Jetten, B.M. Fuchs, and R. Amann. 2008. A microdiver-sity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones. Environ. Microbiol. 10:3106-3119.
    • (2008) Environ. Microbiol , vol.10 , pp. 3106-3119
    • Woebken, D.1    Lam, P.2    Kuypers, M.M.3    Naqvi, S.W.4    Kartal, B.5    Strous, M.6    Jetten, M.S.7    Fuchs, B.M.8    Amann, R.9
  • 35
    • 34547684285 scopus 로고    scopus 로고
    • Diversity and abundance of aerobic and anaerobic ammonium-oxidizing bacteria in freshwater sediments of the Xinyi River (China
    • Zhang, Y., X.H. Ruan, H.J.M. Op den Camp, T.J.M. Smits, M.S. Jetten, and M.C. Schmid. 2007. Diversity and abundance of aerobic and anaerobic ammonium-oxidizing bacteria in freshwater sediments of the Xinyi River (China). Environ. Microbiol. 9:2375-2382.
    • (2007) Environ. Microbiol , vol.9 , pp. 2375-2382
    • Zhang, Y.1    Ruan, X.H.2    Camp, H.J.M.O.P.3    Smits, T.J.M.4    Jetten, M.S.5    Schmid, M.C.6
  • 36
    • 45849134883 scopus 로고    scopus 로고
    • Phylogenetic diversity of nitrogen-fixing bacteria in mangrove sediments assessed by PCR-denaturing gradient gel electrophoresis
    • Zhang, Y., J. Dong, Z. Yang, S. Zhang, and Y. Wang. 2008. Phylogenetic diversity of nitrogen-fixing bacteria in mangrove sediments assessed by PCR-denaturing gradient gel electrophoresis. Arch. Microbiol. 190:19-28.
    • (2008) Arch. Microbiol , vol.190 , pp. 19-28
    • Zhang, Y.1    Dong, J.2    Yang, Z.3    Zhang, S.4    Wang, Y.5
  • 37
    • 0031456471 scopus 로고    scopus 로고
    • Cell biology and molecular basis of denitrifica-tion
    • Zumft, W.G. 1997. Cell biology and molecular basis of denitrifica-tion. Microbiol. Mol. Biol. Rev. 61:533-616.
    • (1997) Microbiol. Mol. Biol. Rev , vol.61 , pp. 533-616
    • Zumft, W.G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.