Features of double-stranded RNA-binding domains of RNA helicase A are necessary for selective recognition and translation of complex mRNAs

Journal of Biological Chemistry

Volumn 286, Issue 7, 2011, Pages 5328-5337

  Ranji, Arnaz ^a,b   Shkriabai, Nikolozi ^a   Kvaratskhelia, Mamuka ^a   Musier Forsyth, Karin ^a   Boris Lawrie, Kathleen ^a,b  

^a OHIO STATE UNIVERSITY   (United States)

^b OHIO STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

C TERMINUS; C-TERMINAL DOMAINS; CO-PRECIPITATES; DOUBLE-STRANDED RNA; GLYCINE RESIDUES; HELICASES; IN-CELL; IN-VITRO; LYSINE RESIDUES; MOLECULAR BASIS; N-TERMINAL DOMAINS; N-TERMINALS; POST-TRANSCRIPTIONAL; RNA HELICASES; SELECTIVE INTERACTION; SELECTIVE RECOGNITION; STRUCTURAL FEATURE; TRANSLATION ACTIVITY;

AMINO ACIDS; CYTOLOGY; FEATURE EXTRACTION; GENE EXPRESSION; RNA;

NUCLEIC ACIDS;

DOUBLE STRANDED RNA; MESSENGER RNA; RNA HELICASE; RNA HELICASE A; UNCLASSIFIED DRUG;

5' UNTRANSLATED REGION; AMINO TERMINAL SEQUENCE; ANISOTROPY; ARTICLE; BINDING AFFINITY; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; HUMAN; HUMAN CELL; IMMUNOPRECIPITATION; MOLECULAR RECOGNITION; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN PROTEIN INTERACTION; RNA TRANSLATION;

5' UNTRANSLATED REGIONS; ANIMALS; DEAD-BOX RNA HELICASES; HEK293 CELLS; HUMANS; NEOPLASM PROTEINS; PROTEIN BIOSYNTHESIS; PROTEIN STRUCTURE, TERTIARY; PROTO-ONCOGENE PROTEINS C-JUN; RETROVIRIDAE; RNA, VIRAL;

EID: 79953035983     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M110.176339     Document Type: Article

References (37)

1. Hartman, T. R., Qian, S., Bolinger, C., Fernandez, S., Schoenberg, D. R., and Boris-Lawrie, K. (2006) Nat. Struct. Mol. Biol. 13, 509-516
2. Bolinger, C., Yilmaz, A., Hartman, T. R., Kovacic, M. B., Fernandez, S., Ye, J., Forget, M., Green, P. L., and Boris-Lawrie, K. (2007) Nucleic Acids Res. 35, 2629-2642
3. Bolinger, C., Sharma, A., Singh, D., Yu, L., and Boris-Lawrie, K. (2010) Nucleic Acids Res. 38, 1686-1696
4. Fierro-Monti, I., and Mathews, M. B. (2000) Trends Biochem. Sci. 25, 241-246
5. Burd, C. G., and Dreyfuss, G. (1994) Science 265, 615-621
6. Fuller-Pace, F. V. (2006) Nucleic Acids Res. 34, 4206-4215
7. Saunders, L. R., and Barber, G. N. (2003) FASEB J. 17, 961-983
8. Bolinger, C., and Boris-Lawrie, K. (2009) Retrovirology 6, 8
9. Smith, W. A., Schurter, B. T., Wong-Staal, F., and David, M. (2004) J. Biol. Chem. 279, 22795-22798
10. Ghisolfi, L., Kharrat, A., Joseph, G., Amalric, F., and Erard, M. (1992) Eur. J. Biochem. 209, 541-548
11. Cartegni, L., Maconi, M., Morandi, E., Cobianchi, F., Riva, S., and Biamonti, G. (1996) J. Mol. Biol. 259, 337-348
12. Bouvet, P., Diaz, J. J., Kindbeiter, K., Madjar, J. J., and Amalric, F. (1998) J. Biol. Chem. 273, 19025-19029
13. Darnell, J. C., Jensen, K. B., Jin, P., Brown, V., Warren, S. T., and Darnell, R. B. (2001) Cell 107, 489-499
14. Zanotti, K. J., Lackey, P. E., Evans, G. L., and Mihailescu, M. R. (2006) Biochemistry 45, 8319-8330
15. Rocak, S., and Linder, P. (2004) Nat. Rev. Mol. Cell Biol. 5, 232-241
16. Linder, P., Lasko, P. F., Ashburner, M., Leroy, P., Nielsen, P. J., Nishi, K., Schnier, J., and Slonimski, P. P. (1989) Nature 337, 121-122
17. Tanner, N. K., and Linder, P. (2001) Mol. Cell 8, 251-262
18. Linder, P. (2006) Nucleic Acids Res. 34, 4168-4180
19. Bamming, D., and Horvath, C. M. (2009) J. Biol. Chem. 284, 9700-9712
20. Cordin, O., Banroques, J., Tanner, N. K., and Linder, P. (2006) Gene 367, 17-37
21. Butsch, M., Hull, S., Wang, Y., Roberts, T. M., and Boris-Lawrie, K. (1999) J. Virol. 73, 4847-4855
22. Hull, S., and Boris-Lawrie, K. (2002) J. Virol. 76, 10211-10218
23. Hernandez, J. M., Floyd, D. H., Weilbaecher, K. N., Green, P. L., and Boris-Lawrie, K. (2008) Oncogene 27, 4757-4767
24. Roberts, T. M., and Boris-Lawrie, K. (2003) J. Virol. 77, 11973-11984
25. Stewart-Maynard, K. M., Cruceanu, M., Wang, F., Vo, M. N., Gorelick, R. J., Williams, M. C., Rouzina, I., and Musier-Forsyth, K. (2008) J. Virol. 82, 10129-10142
26. Taylor, J. R. (1997) An Introduction to Error Analysis: The Study of Uncertainties in Physical Measurements, University Science Books, Sausalito, CA
27. Hellman, L. M., and Fried, M. G. (2007) Nat. Protoc. 2, 1849-1861
28. Stello, T., Hong, M., and Musier-Forsyth, K. (1999) Nucleic Acids Res. 27, 4823-4829
29. Ryter, J. M., and Schultz, S. C. (1998) EMBO J. 17, 7505-7513
30. Nagel, R., and Ares, M., Jr. (2000) RNA 6, 1142-1156
31. Lebars, I., Lamontagne, B., Yoshizawa, S., Aboul-Elela, S., and Fourmy, D. (2001) EMBO J. 20, 7250-7258
32. Ramos, A., Grünert, S., Adams, J., Micklem, D. R., Proctor, M. R., Freund, S., Bycroft, M., St Johnston, D., and Varani, G. (2000) EMBO J. 19, 997-1009
33. Rogers, G. W., Jr., Richter, N. J., Lima, W. F., and Merrick, W. C. (2001) J. Biol. Chem. 276, 30914-30922
34. Nanduri, S., Rahman, F., Williams, B. R., and Qin, J. (2000) EMBO J. 19, 5567-5574
35. Schlegel, B. P., Starita, L. M., and Parvin, J. D. (2003) Oncogene 22, 983-991
36. Erkizan, H. V., Kong, Y., Merchant, M., Schlottmann, S., Barber-Rotenberg, J. S., Yuan, L., Abaan, O. D., Chou, T. H., Dakshanamurthy, S., Brown, M. L., Uren, A., and Toretsky, J. A. (2009) Nat. Med. 15, 750-756
37. Guénard, F., Labrie, Y., Ouellette, G., Beauparlant, C. J., and Durocher, F. (2009) J. Hum. Genet. 54, 152-161