Exploring demographic, physical, and historical explanations for the genetic structure of two lineages of greater antillean bats

PLoS ONE

Volumn 6, Issue 3, 2011, Pages

  Muscarella, Robert A ^a,b   Murray, Kevin L ^b   Ortt, Derek ^c,d   Russell, Amy L ^e   Fleming, Theodore H ^b  

^a Och Spine at New York Presbyterian Hospitals   (United States)

^b Department of Biology   (United States)

^c UNIVERSITY OF MIAMI   (United States)

^d ImpactWeather Inc   (United States)

^e GRAND VALLEY STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BAT; CLIMATE; CONTROLLED STUDY; EROPHYLLA BOMBIFRONS; EROPHYLLA SEZEKORNI; GENE CLUSTER; GENE FLOW; GENE LINKAGE DISEQUILIBRIUM; GENETIC DISTANCE; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; MACROTUS WATERHOUSII; NONHUMAN; POPULATION GENETIC STRUCTURE; POPULATION SIZE; ANIMAL; GENETICS; POPULATION DENSITY; SPECIES DIFFERENCE;

CHIROPTERA; EROPHYLLA; MACROTUS WATERHOUSII; PHYLLOSTOMIDAE;

ANIMALS; CHIROPTERA; GENE FLOW; GENETIC VARIATION; POPULATION DENSITY; SPECIES SPECIFICITY;

EID: 79952827705     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0017704     Document Type: Article

References (80)

1. Dent DH, Wright SJ, (2009) The future of tropical species in secondary forests: A quantitative review. Biological Conservation 142: 2833-2843.
2. Slatkin M, (1987) Gene flow and the geographic structure of natural populations. Science 236: 787-792.
3. Freeland J, (2006) Molecular Ecology West Sussex, England John Wiley & Sons Ltd.
4. Coulon A, Cosson JF, Angibault JM, Cargnelutti B, Galan M, et al. (2004) Landscape connectivity influences gene flow in a roe deer population inhabiting a fragmented landscape: an individual-based approach. Molecular Ecology 13: 2841-2850.
5. Cushman SA, McKelvey KS, Hayden J, Schwartz MK, (2006) Gene flow in complex landscapes: testing multiple hypotheses with causal modeling. The American Naturalist 168: 486-499.
6. Balkenhol N, Gugerli F, Cushman S, Waits L, Coulon A, et al. (2009) Identifying future research needs in landscape genetics: where to from here? Landscape Ecology 24: 455-463.
7. Manel S, Schwartz MK, Luikart G, Taberlet P, (2003) Landscape genetics: combining landscape ecology and population genetics. Trends in Ecology & Evolution 18: 189-197.
8. Sork VL, Waits L, (2010) Contributions of landscape genetics- approaches, insights, and future potential. Molecular Ecology 19: 3489-3495.
9. Dias PC, (1996) Sources and sinks in population biology. Trends in Ecology & Evolution 11: 326-330.
10. Telschow A, Engelstädter J, Yamamura N, Hammerstein P, Hurst GDD, (2006) Asymmetric gene flow and constraints on adaptation caused by sex ratio distorters. Journal of Evolutionary Biology 19: 869-878.
11. Hemmer-Hansen J, Nielsen EE, Grønkjaer P, Loeschcke V, (2007) Evolutionary mechanisms shaping the genetic population structure of marine fishes; lessons from the European flounder (Platichthys flesus L.). Molecular Ecology 16: 3104-3118.
12. Pulliam HR, (1988) Sources, sinks, and population regulation. The American Naturalist 132: 652-661.
13. MacArthur RH, Wilson EO, (1967) The Theory of Island Biogeography: Princeton University Press.
14. Fraser DJ, Lippe C, Bernatchez L, (2004) Consequences of unequal population size, asymmetric gene flow and sex-biased dispersal on population structure in brook charr (Salvelinus fontinalis). Molecular Ecology 13: 67-80.
15. Renner S, (2004) Plant dispersal across the tropical Atlantic by wind and sea currents. International Journal of Plant Sciences 165: S23-S33.
16. Palstra FP, O'Connell MF, Ruzzante DE, (2007) Population structure and gene flow reversals in Atlantic salmon (Salmo salar) over contemporary and long-term temporal scales: effects of population size and life history. Molecular Ecology 16: 4504-4522.
17. Kawecki TJ, Holt RD, (2002) Evolutionary consequences of asymmetric dispersal rates. The American Naturalist 160: 333-347.
18. Cook LG, Crisp MD, (2005) Directional asymmetry of long-distance dispersal and colonization could mislead reconstructions of biogeography. Journal of Biogeography 32: 741-754.
19. Vuilleumier S, Possingham HP, (2006) Does colonization asymmetry matter in metapopulations? Proceedings of the Royal Society B: Biological Sciences 273: 1637-1642.
20. Wares JP, Gaines SD, Cunningham CW, (2001) A comparative study of asymmetric migration events across a marine biogeographic boundary. Evolution; International Journal of Organic Evolution 55: 295-306.
21. Hare MP, Guenther C, Fagan WF, (2005) Nonrandom larval dispersal can steepen marine clines. Evolution 59: 2509-2517.
22. Galindo HM, Olson DB, Palumbi SR, (2006) Seascape genetics: a coupled oceanographic-genetic model predicts population structure of Caribbean corals. Current Biology 16: 1622-1626.
23. Westberg E, Kadereit JW, (2009) The influence of sea currents, past disruption of gene flow and species biology on the phylogeographical structure of coastal flowering plants. Journal of Biogeography 36: 1398-1410.
24. Muñoz J, Felicísimo ÁM, Cabezas F, Burgaz AR, Martínez I, (2004) Wind as a long-distance dispersal vehicle in the southern hemisphere. Science 304: 1144-1147.
25. Austerlitz F, Dutech C, Smouse PE, Davis F, Sork VL, (2007) Estimating anisotropic pollen dispersal: a case study in Quercus lobata. Heredity 99: 193-204.
26. Calsbeek R, Smith TB, (2003) Ocean currents mediate evolution in island lizards. Nature 426: 552-555.
27. Consuegra S, Verspoor E, Knox D, Garcia de Leaniz C, (2005) Asymmetric gene flow and the evolutionary maintenance of genetic diversity in small, peripheral Atlantic salmon populations. Conservation Genetics 6: 823-842.
28. Carstens BC, Sullivan J, Davalos LM, Larsen PA, Pedersen SC, (2004) Exploring population genetic structure in three species of Lesser Antillean bats. Molecular Ecology 13: 2557-2566.
29. Simmons NB, (2005) Order Chiroptera Baltimore, MD Johns Hopkins Press pp. 312-529.
30. Murray KL, Fleming TH, (2008) Social structure and mating system of the buffy flower bat, Erophylla sezekorni (Chiroptera, Phyllostomidae). Journal of Mammalogy 89: 1391-1400.
31. Fleming TH, Murray KL, Carstens BC, (2009) Phylogeography and genetic structure of three evolutionary lineages of West Indian Phyllostomid bats. In: Fleming TH, Racey PA, editors. Island Bats: Evolution, Ecology, and Conservation Chicago University of Chicago Press pp. 116-152.
32. Nowak RM, (1994) Walker's Bats of the World Baltimore, MD The Johns Hopkins University Press.
33. Baker RJ, Hoofer SR, Porter CA, Van den Bussche RA, (2003) Diversification among New World Leaf-nosed bats: an evolutionary hypothsis and classification inferred from digenomic congruence of DNA sequences. Occasional Papers, Museum of Texas Tech University 230: 1-32.
34. Jones KE, Bininda-Emonds ORP, Gittleman JL, (2005) Bats, clocks, and rocks: diversification patterns in Chiroptera. Evolution 59: 2243-2255.
35. Teeling EC, Springer MS, Madsen O, Bates P, O'Brien SJ, et al. (2005) A molecular phylogeny for bats illuminates biogeography and the fossil record. Science 307: 580-584.
36. Anderson S, (1969) Macrotus waterhousii. Mammalian Species 1: 1-4.
37. Rodríguez-Durán A, (1995) Metabolic rates and thermal conductance in four species of neotropical bats roosting in hot caves. Comparative Biochemistry and Physiology Part A: Physiology 110: 347-355.
38. Soto-Centeno JA, Kurta A, (2006) Diet of two nectarivorous bats, Erophylla sezekorni and Monophyllus redmani (Phyllostomidae), on Puerto Rico. Journal of Mammalogy 87: 19-26.
39. Bell GP, (1985) The sensory basis of prey location by the California Leaf-nosed bat Macrotus californicus (Chiroptera: Phyllostomidae). Behavioral Ecology and Sociobiology 16: 343-347.
40. Murray KL, Fleming TH, Gaines MS, Williams DA, (2008) Characterization of polymorphic microsatellite loci for two species of phyllostomid bats from the Greater Antilles. Molecular Ecology Resources 8: 596-598.
41. Weir BS, Cockerham CC, (1984) Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
42. Kerth G, Mayer F, Petit E, (2002) Extreme sex-biased dispersal in the communally breeding, nonmigratory Bechstein's bat (Myotis bechsteinii). Molecular Ecology 11: 1491-1498.
43. Goudet J, Perrin N, Waser P, (2002) Tests for sex-biased dispersal using bi-parentally inherited genetic markers. Molecular Ecology 11: 1103-1114.
44. Goudet J, (2001) FSTAT: a program to estimate and test gene diversities and fixation indices.
45. Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P, (2004) Micro-Checker: software for identifying and correcting genotyping errors in microsatellite data. Molecular Ecology Notes 4: 535-538.
46. Pritchard JK, Stephens M, Donnelly P, (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
47. Corander J, Gyllenberg M, Koski T, (2006) Random partition models and exchangeability for bayesian identification of population structure. Bulletin of Mathematical Biology 69: 797-815.
48. Corander J, Waldmann P, Sillanpaa MJ, (2003) Bayesian analysis of genetic differentiation between populations. Genetics 163: 367-374.
49. Hadley G, (1735) On the cause of the general trade-winds. Philosophical Transactions 39: 58-62.
50. Jenness J, (2004) Distance and bearing between matched features extension for ArcView 3.x. Jenness Enterprises.
51. Clark Labs (2006) IDRISI Andes Worcester, MA Clark University.
52. Beerli P, Felsenstein J, (2001) Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proceedings of the National Academy of Sciences of the United States of America 98: 4563-4568.
53. Whitlock MC, McCauley DE, (1999) Indirect measures of gene flow and migration: FST[ne]1/(4Nm+1). Heredity 82: 117-125.
54. Beerli P, (2004) MIGRATE, documentation and program, part of LAMARC. 2.0 ed.
55. Wilson GA, Rannala B, (2003) Bayesian inference of recent migration rates using multilocus genotypes. Genetics 163: 1177-1191.
56. Hey J, Nielsen R, (2004) Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis. Genetics 167: 747-760.
57. Hey J, (2005) On the number of new world founders: a population genetic portrait of the peopling of the Americas. PLoS Biol 3: e193-e193.
58. Mantel N, (1967) The detection of disease clustering and a generalized regression approach. Cancer Research 27: 209-220.
59. Russell AL, Goodman SM, Cox MP, (2007) Coalescent analyses support multiple mainland-to-island dispersals in the evolution of Malagasy Triaenops bats (Chiroptera: Hipposideridae). Journal of Biogeography 35: 995-1003.
60. Hedges SB, (1996) Historical biogeography of West Indian vertebrates. Annual Review of Ecology and Systematics 27: 163-196.
61. Roberts TE, (2006) History, ocean channels, and distance determine phylogeographic patterns in three widespread Philippine fruit bats (Pteropodidae). Molecular Ecology 15: 2183-2199.
62. Morgan GS, (2001) Patterns of extinction in West Indian bats. In: C.A. W, Sergile FE, editors. Biogeography of the West Indies: patterns and perspectives Boca Raton CRC Press pp. 368-407.
63. Jones KE, Purvis A, Gittleman JL, (2003) Biological correlates of extinction risk in bats. The American Naturalist 161: 601-614.
64. Safi K, Kerth G, (2004) A comparative analysis of specialization and extinction risk in temperate-zone bats. Conservation Biology 18: 1293-1303.
65. Griffiths TA, Klingener D, (1988) On the distribution of Greater Antillean bats. Biotropica 20: 240-251.
66. Liechti F, (2006) Birds: blowin' by the wind? Journal of Ornithology 147: 202-211.
67. Akesson S, Hedenström A, (2007) How migrants get there: migratory performance and orientation. BioScience 57: 123-123.
68. Shamoun-Baranes J, Loon Ev, Liechti F, (2007) Analyzing the effect of wind on flight: pitfalls and solutions. Journal of Experimental Biology 210: 82-90.
69. Hanfling B, Weetman D, (2006) Concordant genetic estimators of migration reveal anthropogenically enhanced source-sink population structure in the River Sculpin, Cottus gobio. Genetics 173: 1487-1501.
70. Norberg UM, Rayner JMV, (1987) Ecological morphology and flight in bats (Mammalia; Chiroptera): wing adaptations, flight performance, foraging strategy and echolocation. Philosophical Transactions of the Royal Society B: Biological Sciences 316: 335-427.
71. Norberg U, (1990) Vertebrate Flight: mechanics, physiology, morphology, ecology, and evolution Berlin Springer-Verlag.
72. Jennings NV, Parsons S, Barlow KE, Gannon MR, (2004) Echolocation calls and wing morphology of bats from the West Indies. Acta Chiropterologica 6: 75-90.
73. Valdivieso D, Conde E, Tamsitt JR, (1968) Lactate dehydrogenase studies in Puerto Rican bats. Comparative Biochemistry and Physiology 27: 133-138.
74. Sahley C, Horner M, Fleming T, (1993) Flight speeds and mechanical power outputs of the nectar-feeding bat, Leptonycteris curasoae (Phyllostomidae, Glossophaginae). Journal of Mammalogy 74: 594-600.
75. Caviedes Cs, (1991) Five hundred years of hurricanes in the Caribbean: their relationship with global climatic variabilities. GeoJournal 23.
76. Jones KE, Barlow KE, Vaughan N, Rodriguez-Duran A, Gannon MR, (2001) Short-term impacts of extreme environmental disturbance on the bats of Puerto Rico. Animal Conservation 4: 59-66.
77. Gannon MR, Willig MR, (1994) The effects of hurricane Hugo on bats of the Luquillo Experimental Forest of Puerto Rico. Biotropica 26: 320-331.
78. Fleming TH, Murray KL, (2009) Population and genetic consequences of hurricanes for three species of West Indian Phyllostomid bats. Biotropica 41: 250-256.
79. Zink RM, (1996) Comparative phylogeography in North American birds. Evolution 50: 308-317.
80. Heaney LR, (2007) Is a new paradigm emerging for oceanic island biogeography? Journal of Biogeography 34: 753-757.