Temporal population genetics and coi phylogeography of the sandhopper macarorchestia remyi (Amphipoda: Talitridae)

Zoological Studies

Volumn 50, Issue 2, 2011, Pages 220-229

  Pavesi, Laura ^a,b   de Matthaeis, Elvira ^a   Tiedemann, Ralph ^b   Ketmaier, Valerio ^b  

^a SAPIENZA UNIVERSITY OF ROME   (Italy)

^b UNIVERSITY OF POTSDAM   (Germany)

Author keywords

Cytochrome oxidase I; Macarorchestia remyi; Population genetics; Talitridae

Indexed keywords

AMPHIPODA; TALITRIDAE;

EID: 79952426417     PISSN: 10215506     EISSN: 1810522X     Source Type: Journal    
DOI: None     Document Type: Article

References (29)

1. Clement M, D Posada, KA Crandall. 2000. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9: 1657-1659.
2. Costa FO, JR deWaard, J Boutillier, S Ratnasingham, RT Dooh, M Hajibabaei, PDN Hebert. 2007. Biological identification through DNA barcodes: the case of Crustacea. Can. J. Fish. Aquat. Sci. 64: 272-295.
3. De Matthaeis E, M Cobolli, M Mattoccia, F Scapini. 1995. Geographic variation in Talitrus saltator (Crustacea, Amphipoda): biochemical evidence. Boll. Zool. 62: 77-84.
4. De Matthaeis E, D Davolos, M Cobolli. 1998. Genetic divergence between populations and species of talitrids from Aegean islands. J. Hered. 89: 37-43.
5. De Matthaeis E, D Davolos, M Cobolli, V Ketmaier. 2000. Isolation by distance in equilibrium and non-equilibrium populations of four talitrid species in the Mediterranean Sea. Evolution 54: 1606-1613.
6. De Matthaeis E, V Ketmaier, D Davolos, M Cobolli. 1999. Genetic structure and gene flow patterns in four talitrid amphipod species of Aegean area. Biogeographia 20: 95-104. (in Italian)
7. De Matthaeis E, V Ketmaier, D Davolos, PJ Schembri. 2000. Pattern of genetic diversity in Mediterranean supralittoral amphipods (Crustacea, Amphipoda). Pol. Arch. Hydrobiol. 47: 473-487.
8. Excoffier L, A Estoup, JM Cornuet. 2005. Bayesian analysis of an admixture model with mutations and arbitrarily linked markers. Genetics 169: 1727-1738.
9. Excoffier L, P Smouse, J Quattro. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
10. Folmer O, M Black, W Hoeh, R Lutz, R Vrijenhoek. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol. 3: 294-299.
11. Harpending RC. 1994. Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Hum. Biol. 66: 591-600.
12. Henzler CM. 2006. Rafting and refugia in North Atlantic amphipods: understanding the effects of Pleistocene climate change on low-dispersal marine species. PhD dissertation, Duke Univ., Durham, NC.
13. Henzler CM, A Ingólfsson. 2007. The biogeography of the beachflea, Orchestia gammarellus (Crustacea, Amphipoda, Talitridae), in the North Atlantic with special reference to Iceland: a morphometric and genetic study. Zool. Scr. 37: 57-70.
14. Kelly DW, HJ MacIsaac, DD Heath. 2006. Vicariance and dispersal effects on phylogeographic structure and speciation in a widespread estuarine invertebrate. Evolution 60: 257-267.
15. Ketmaier V, E De Matthaeis, L Fanini, C Rossano, F Scapini. 2010. Variation of genetic and behavioral traits in the sandhopper Talitrus saltator (Crustacea, Amphipoda) along a dynamic sand beach. Ethol. Ecol. Evol. 22: 17-35.
16. Ketmaier V, V Iuri, E De Matthaeis. 2005a. Genetic resources and molecular markers in Talitrus saltator (Amphipoda, Talitridae) from the beach of Smir. In A Bayed, F Scapini, eds. Special Issue of Série des travaux de l'Institut Scientifique (Université Mohammed V-Agdal): 55-60. Ecosystèmes côtiers sensibles de la Méditerranée cas du littoral de Smir. Trav. Inst. Scientif., Rabat, sériee générale 4: 55-59.
17. Ketmaier V, D Pirollo, E De Matthaeis, R Tiedemann, G Mura. 2008. Large scale mitochondrial phylogeography in the halophilic fairy shrimp Phallocryptus spinosa (Milne- Edwards 1840) (Branchiopoda: Anostraca). Aquat. Sci. 70: 65-76.
18. Ketmaier V, F Scapini, E De Matthaeis. 2003. Exploratory analysis of talitrid population genetics as an indicator of the quality of sandy beaches. Estuar. Coast. Shelf. Sci. 58: 159-167.
19. Ketmaier V, F Scapini, E De Matthaeis. 2005b. Microgeographical variation of genetic and behavioural traits in the sandhopper Talitrus saltator (Crustacea, Amphipoda) along a dynamic beach. A paper presented at the Sixth International Crustacean Congress. 18-22 July 2005, Glasgow, Scotland.
20. Pavesi L, E De Matthaeis. 2009. Life history of the amphipod Macarorchestia remyi (Schellenberg, 1950) on a Tyrrhenian sandy beach, Italy. Hydrobiologia 635: 171-180.
21. Posada D, Crandall KA. 1998. MODEL-TEST: testing the model of DNA substitution. Bioinformatics 14: 656-658.
22. Ruffo S. 1960. Studies on Crustacean amphipods. A contribution to the knowledge of Crustacean amphipods of subterranean waters of Sardinia and Baleari Islands. Estratto dagli Atti dell'Istituto Veneto di Scienze, Lettere ed Arti. A. A. 1959-60 - Tomo CXVIII, pp. 168-180. (in Italian)
23. Ruffo S. 1993. The Amphipoda of the Mediterranean. Part 3. Gammaridea (Melphidippidae to Talitridae), Ingolfiellidea, Caprellidea. In D Bellan-Santini, G Karaman, G Krapp- Schickel, M Ledoyer, S Ruffo. Me ́m. Inst. Oce ́anogr. Monaco 13: 365-576. Mém. Inst. Océanogr. Monaco, 13: xxi-xxv + 577-814.
24. Schellenberg A. 1950. Subterrane Amphipoden korsikanischer Biotope. Arch. f. Hydrobiol. 44(Supplement 2): 325-332.
25. Schneider S, L Excoffier. 1999. Estimation of demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites: application to human mitochondrial DNA. Genetics 152: 1079-1089.
26. Slatkin M. 1993. Isolation by distance in equilibrium and nonequilibrium populations. Evolution 47: 264-279.
27. Swofford D. 2002. PAUP* β-version 4.10. Sunderland, MA: Sinauer Associates.
28. Templeton AR, KA Crandall, CF Sing. 1992. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 132: 619-633.
29. Witt JDS, DL Threloff, PDN Hebert. 2006. DNA barcoding reveals extraordinary cryptic diversity in an amphipod genus: implications for desert spring conservation. Mol. Ecol. 15: 3073-3082.