Global landscape of structural proteins of infectious spleen and kidney necrosis virus

Journal of Virology

Volumn 85, Issue 6, 2011, Pages 2869-2877

  Dong, Chuan Fu ^a   Xiong, Xiao Peng ^a   Shuang, Fan ^a   Weng, Shao Ping ^a   Zhang, Jing ^a   Zhang, Ye ^a   Luo, Yong Wen ^a   He, Jian Guo ^a  

^a SUN YAT SEN UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEOME; VIRUS PROTEIN;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; GEL ELECTROPHORESIS; GENE EXPRESSION; IMMUNOELECTRON MICROSCOPY; IN VITRO STUDY; INFECTIOUS SPLEEN AND KIDNEY NECROSIS VIRUS; IRIDOVIRUS; LIQUID CHROMATOGRAPHY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN LOCALIZATION; TWO DIMENSIONAL GEL ELECTROPHORESIS; VIRION; VIRUS GENOME; WESTERN BLOTTING;

ANIMALS; CELL LINE; CHINA; CHROMATOGRAPHY, LIQUID; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FISHES; IRIDOVIRIDAE; PROTEOME; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; VIRAL STRUCTURAL PROTEINS; VIRION;

INFECTIOUS SPLEEN AND KIDNEY NECROSIS VIRUS; IRIDOVIRIDAE; MEGALOCYTIVIRUS;

EID: 79952414866     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.01444-10     Document Type: Article

References (41)

1. Ao, J., and X. Chen. 2006. Identification and characterization of a novel gene encoding an RGD-containing protein in large yellow croaker iridovirus. Virology 355:213-222. (Pubitemid 44692771)
2. Chao, C. B., C. Y. Chen, Y. Y. Lai, C. S. Lin, and H. T. Huang. 2004. Histological, ultrastructural, and in situ hybridization study on enlarged cells in grouper Epinephelus hybrids infected by grouper iridovirus in Taiwan (TGIV). Dis. Aquat. Organ. 58:127-142.
3. Chinchar, V. G., et al. 2005. Family Iridoviridae, p. 145-161. In C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger, and L. A. Ball (ed.), Virus taxonomy. Eighth report of the International Committee on Taxonomy of Viruses. Academic Press, San Diego, CA.
4. Chinchar, V. G., A. Hyatt, T. Miyazaki, and T. Williams. 2009. Family Iridoviridae: poor viral relations no longer. Curr. Top. Microbiol. Immunol. 328:123-170.
5. Do, J. W., et al. 2005. Phylogenetic analysis of the major capsid protein gene of iridovirus isolates from cultured flounders Paralichthys olivaceus in Korea. Dis. Aquat. Organ. 64:193-200.
6. Do, J. W., et al. 2004. Complete genomic DNA sequence of rock bream iridovirus. Virology 325:351-363. (Pubitemid 38902800)
7. Dong, C., et al. 2008. Development of a mandarin fish Siniperca chuatsi fry cell line suitable for the study of infectious spleen and kidney necrosis virus (ISKNV). Virus Res. 135:273-281.
8. Dong, C., et al. 2010. A new marine megalocytivirus from spotted knifejaw, Oplegnathus punctatus, and its pathogenicity to freshwater mandarinfish, Siniperca chuatsi. Virus Res. 147:98-106.
9. Eaton, H. E., et al. 2007. Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes. Virol. J. 4:11.
10. He, J. G., et al. 2001. Complete genome analysis of the mandarin fish infectious spleen and kidney necrosis iridovirus. Virology 291:126-139. (Pubitemid 34062206)
11. Heppell, J., and L. Berthiaume. 1992. Ultrastructure of lymphocystis disease virus (LDV) as compared to frog virus 3 (FV3) and chilo iridescent virus (CIV): effects of enzymatic digestions and detergent degradations. Arch. Virol. 125:215-226.
12. Huang, C., et al. 2002. Proteomic analysis of shrimp white spot syndrome viral proteins and characterization of a novel envelope protein VP466. Mol. Cell. Proteomics 1:223-231.
13. Imajoh, M., T. Ikawa, and S. Oshima. 2007. Characterization of a new fibroblast cell line from a tail fin of red sea bream, Pagrus major, and phylogenetic relationships of a recent RSIV isolate in Japan. Virus Res. 126:45-52.
14. Jeong, J. B., et al. 2008. Outbreaks and risks of infectious spleen and kidney necrosis virus disease in freshwater ornamental fishes. Dis. Aquat. Organ. 78:209-215.
15. Kim, Y. I., Y. M. Ha, Y. K. Nam, K. H. Kim, and S. K. Kim. 2008. Production of polyclonal antibody against recombinant ORF 112 L of rock bream (Oplegnathus fasciatus) iridovirus (RBIV) and in vitro neutralization. J. Environ. Biol. 29:571-576.
16. Kocher, T., et al. 2009. High precision quantitative proteomics using iTRAQ on an LTQ Orbitrap: a new mass spectrometric method combining the benefits of all. J. Proteome Res. 8:4743-4752.
17. Kurita, J., K. I. H. Nakajima, and T. Aoki. 2002. Complete genome sequencing of red sea bream iridovirus (RSIV). Fish. Sci. 68:1113-1115.
18. Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
19. Li, Z., et al. 2007. Shotgun identification of the structural proteome of shrimp white spot syndrome virus and iTRAQ differentiation of envelope and nucleocapsid subproteomes. Mol. Cell. Proteomics 6:1609-1620.
20. Lü, L., et al. 2005. Complete genome sequence analysis of an iridovirus isolated from the orange-spotted grouper, Epinephelus coioides. Virology 339:81-100. (Pubitemid 41096066)
21. Lua, D. T., M. Yasuike, I. Hirono, and T. Aoki. 2005. Transcription program of red sea bream iridovirus as revealed by DNA microarrays. J. Virol. 79:15151-15164. (Pubitemid 43032298)
22. Maxwell, K. L., and L. Frappier. 2007. Viral proteomics. Microbiol. Mol. Biol. Rev. 71:398-411.
23. Michel, B., et al. 2010. The genome of cyprinid herpesvirus 3 encodes 40 proteins incorporated in mature virions. J. Gen. Virol. 91:452-462.
24. Modis, Y., S. Ogata, D. Clements, and S. C. Harrison. 2004. Structure of the dengue virus envelope protein after membrane fusion. Nature 427:313-319.
25. Ramaroson, M. F., J. Ruby, M. B. Goshe, and H. C. Liu. 2008. Changes in the Gallus gallus proteome induced by Marek's disease virus. J. Proteome Res. 7:4346-4358.
26. Song, W., Q. Lin, S. B. Joshi, T. K. Lim, and C. L. Hew. 2006. Proteomic studies of the Singapore grouper iridovirus. Mol. Cell. Proteomics 5:256-264.
27. Song, W. J., et al. 2004. Functional genomics analysis of Singapore grouper iridovirus: complete sequence determination and proteomic analysis. J. Virol. 78:12576-12590.
28. Tan, Y., D. K. Bideshi, J. J. Johnson, Y. Bigot, and B. A. Federici. 2009. Proteomic analysis of the Spodoptera frugiperda ascovirus 1a virion reveals 21 proteins. J. Gen. Virol. 90:359-365.
29. Tsai, J. M., et al. 2004. Genomic and proteomic analysis of thirty-nine structural proteins of shrimp white spot syndrome virus. J. Virol. 78:11360-11370.
30. Tsai, J. M., et al. 2006. Identification of the nucleocapsid, tegument, and envelope proteins of the shrimp white spot syndrome virus virion. J. Virol. 80:3021-3029.
31. Wang, Y. Q., et al. 2007. Molecular epidemiology and phylogenetic analysis of a marine fish infectious spleen and kidney necrosis virus-like (ISKNV-like) virus. Arch. Virol. 152:763-773.
32. Wang, Z. L., et al. 2008. Infectious spleen and kidney necrosis virus ORF48R functions as a new viral vascular endothelial growth factor. J. Virol. 82:4371-4383.
33. Westermeier, R., and T. Naven. 2002. Proteomics in practice: a laboratory manual of proteome analysis, p. 143-145. Wiley-VCH Verlag-GmbH, Weinheim, Germany.
34. Whitley, D. S., et al. 2010. Frog virus 3 ORF 53R, a putative myristoylated membrane protein, is essential for virus replication in vitro. Virology 405:448-456.
35. Williams, T., V. Barbosa-Solomieu, and V. G. Chinchar. 2005. A decade of advances in iridovirus research. Adv. Virus Res. 65:173-248.
36. Xie, J., et al. 2007. RING finger proteins of infectious spleen and kidney necrosis virus (ISKNV) function as ubiquitin ligase enzymes. Virus Res. 123:170-177. (Pubitemid 46054339)
37. Xie, X., L. Xu, and F. Yang. 2006. Proteomic analysis of the major envelope and nucleocapsid proteins of white spot syndrome virus. J. Virol. 80:10615-10623. (Pubitemid 44628907)
38. Xiong, X. P., et al. 2010. Differentially expressed outer membrane proteins of Vibrio alginolyticus in response to six types of antibiotics. Mar. Biotechnol. (N.Y.) 12:686-695.
39. Zhang, X., C. Huang, X. Tang, Y. Zhuang, and C. L. Hew. 2004. Identification of structural proteins from shrimp white spot syndrome virus (WSSV) by 2DE-MS. Proteins 55:229-235.
40. Zhao, Z., et al. 2008. Identification and characterization of a novel envelope protein in Rana grylio virus. J. Gen. Virol. 89:1866-1872.
41. Zhou, Q., L. Xu, H. Li, Y. P. Qi, and F. Yang. 2009. Four major envelope proteins of white spot syndrome virus bind to form a complex. J. Virol. 83:4709-4712.