Sparse canonical correlation analysis applied to fMRI and genetic data fusion

Proceedings - 2010 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2010

Volumn , Issue , 2010, Pages 422-426

  Boutte, David ^a   Liu, Jingyu ^a  

^a MIND RESEARCH NETWORK   (United States)

Author keywords

CCA; CNV; Data fusion; fMRI

Indexed keywords

BIO-MARKER DISCOVERY; BRAIN ACTIVITY; CANONICAL CORRELATION ANALYSIS; CCA; CNV; FMRI; FUNCTIONAL MAGNETIC RESONANCE IMAGING; GENETIC DATA; GENETIC INFORMATION; MEASUREMENT SPACES;

BIOINFORMATICS; BRAIN; DATA STRUCTURES; GENES; INFORMATION FUSION; MAGNETIC RESONANCE IMAGING; RESONANCE;

DATA FUSION;

EID: 79952374823     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/BIBM.2010.5706603     Document Type: Conference Paper

References (12)

1. J. Liu, G. Pearlson, A. Windemuth, G. Ruano, N. I. Perrone-Bizzozero and V. D. Calhoun, "Combining fMRI and SNP data to investigate connections between brain function and genetics using parallel ICA." Human Brain Mapping vol. 30 No. 1 pp: 241-255, 2009.
2. H. Hotelling, "Relations between two sets of variates", Biometrika vol. 28, pp. 321-377, 1936.
3. E.H. Cook and S.W. Scherer, "Copy-number variations associated with neuropsychiatric conditions." Nature 455 pp: 919-923, 2008.
4. A. Hyvarinen, J. Karhunen and E. Oja, Independent component analysis, John Wiley and Sons, New York, 2001.
5. D. Witten, R. Tibshirani and T. Hastie, "A penalized matrix decomposition, with application to sparse principle components and canonical correlation analysis", Biostatistics, pp. 1-20, 2009.
6. R. Tibshirani, "Regression shrinkage and selection via the lasso", Journal of the Royal Statistical Society B. 58, pp: 267-288, 1996.
7. E. Parkhomenko, D. Tritchler and J. Beyene, "Sparse canonical correlation analysis with application to genomic data integration", Statistical Applications in Genetics and Molecular Biology, vol. 8, No. 1, 2009.
8. S. Waaijenborg, P. Verselewel de Witt Hamer, and A. Zwinderman, "Quantifying the association between gene expressions and dna-markers by penalized canonical correlation analysis", Statistical Applications in Genetics and Molecular Biology, vol. 7, No. 1, 2008.
9. H. Zou and T. Hastie, "Regularization and variable selection via the elastic net", Journal of the Royal Statistical Society B. 67, pp: 301-320, 2005. (Pubitemid 40465877)
10. A. Lykou and J. Whittaker, "Sparse CCA using a lasso with positivity constraints", Computational Statistics and Data Analysis, doi:10.1016/j.csda.2009.08.002, 2009.
11. R. A. Johnson and D. W. Wichern, Applied Multivariate Statistical Analysis, Prentice-Hall, 2002.
12. A. N. Tychonoff and V. Y. Arsenin, Solution of Ill-posed Problems, Winston and Sons, 1977.