Comparing genotyping algorithms for Illumina's Infinium whole-genome SNP BeadChips

BMC Bioinformatics

Volumn 12, Issue , 2011, Pages

  Ritchie, Matthew E ^a,b   Liu, Ruijie ^a   Carvalho, Benilton S ^c   Irizarry, Rafael A ^d   Bahlo, Melanie ^a   Booth, David R ^e   Broadley, Simon A ^f,g   Brown, Matthew A ^h,i   Foote, Simon J ^j   Griffiths, Lyn R ^k   Kilpatrick, Trevor J ^b,l   Lechner Scott, Jeanette ^m,n   Moscato, Pablo ^n,o   Perreau, Victoria M ^b   Rubio, Justin P ^b   Scott, Rodney J ^m,n,o   Stankovich, Jim ^j   Stewart, Graeme J ^e   Taylor, Bruce V ^j   Wiley, James ^p   Clarke, Glynnis ^q   Cox, Mathew B ^n,o   Csurhes, Peter A ^r   Danoy, Patrick ^h   Dickinson, Joanne L ^j   Drysdale, Karen ^j   Field, Judith ^b   Greer, Judith M ^r   Guru, Preethi ^j   Hadler, Johanna ^h   Hoban, Ella ^j   McMorran, Brendan J ^j   Jensen, Cathy J ^b   Johnson, Laura J ^b   McCallum, Ruth ^s   Merriman, Marilyn ^s   Merriman, Tony ^s   Polanowski, Andrea ^j   Pryce, Karena ^h   Tajouri, Lotfi ^k   Whittock, Lucy ^j   Wilkins, Ella J ^b   Browning, Brian L ^t   Browning, Sharon R ^t   Perera, Devindri ^j   Butzkueven, Helmut ^b,u   Carroll, William M ^v,w   Chapman, Caron ^x   Kermode, Allan G ^v,w   Marriott, Mark ^l   Mason, Deborah ^y   Heard, Robert N ^e   Pender, Michael P ^h,z   Slee, Mark ^aa   Tubridy, Niall ^ab   Willoughby, Ernest ^ac   more..

^a WALTER AND ELIZA HALL INSTITUTE OF MEDICAL RESEARCH   (Australia)

^b UNIVERSITY OF MELBOURNE   (Australia)

^c UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^d JOHNS HOPKINS BLOOMBERG SCHOOL OF PUBLIC HEALTH   (United States)

^e WESTMEAD HOSPITAL   (Australia)

^f GRIFFITH UNIVERSITY   (Australia)

^g GOLD COAST UNIVERSITY HOSPITAL   (Australia)

^h UNIVERSITY OF QUEENSLAND   (Australia)

ⁱ UNIVERSITY OF OXFORD   (United Kingdom)

^j UNIVERSITY OF TASMANIA   (Australia)

^k GRIFFITH UNIVERSITY   (Australia)

^l ROYAL MELBOURNE HOSPITAL   (Australia)

^m JOHN HUNTER HOSPITAL   (Australia)

ⁿ HUNTER MEDICAL RESEARCH INSTITUTE   (Australia)

^o UNIVERSITY OF NEWCASTLE   (Australia)

^p NEPEAN HOSPITAL   (Australia)

^q UNIVERSITY OF OTAGO   (New Zealand)

^r UNIVERSITY OF QUEENSLAND   (Australia)

^s UNIVERSITY OF OTAGO   (New Zealand)

^t UNIVERSITY OF AUCKLAND   (New Zealand)

^u BOX HILL HOSPITAL   (Australia)

^v SIR CHARLES GAIRDNER HOSPITAL   (Australia)

^w Australian Neuromuscular Research Institute   (Australia)

^x BARWON HEALTH   (Australia)

^y CANTERBURY DISTRICT HEALTH BOARD   (New Zealand)

^z ROYAL BRISBANE AND WOMEN'S HOSPITAL   (Australia)

^aa FLINDERS UNIVERSITY   (Australia)

^ab ST VINCENT S UNIVERSITY HOSPITAL   (Ireland)

^ac Waitemata District Healthboard   (New Zealand)

more..

Author keywords

[No Author keywords available]

Indexed keywords

GENETIC STUDIES; GENOME-WIDE ASSOCIATION STUDIES; GENOTYPING; ILLUMINA; LARGE-SCALES; NUMBER OF SAMPLES; PERFORMANCE; SAMPLE SIZES; SMALL SCALE; STATISTIC MODELING;

ALGORITHM; ALLELE; ARTICLE; CLUSTER ANALYSIS; COMPARATIVE STUDY; GENE FREQUENCY; GENETIC ASSOCIATION; GENOTYPE; HUMAN; SAMPLE SIZE; SINGLE NUCLEOTIDE POLYMORPHISM; STATISTICAL MODEL;

ALGORITHMS; ALLELES; CLUSTER ANALYSIS; GENE FREQUENCY; GENOME-WIDE ASSOCIATION STUDY; GENOTYPE; HUMANS; MODELS, STATISTICAL; POLYMORPHISM, SINGLE NUCLEOTIDE; SAMPLE SIZE;

MLCS; MLOWN;

EID: 79952330384     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-12-68     Document Type: Article

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