Deep Cap Analysis of Gene Expression

Methods in Molecular Biology

Volumn 687, Issue , 2011, Pages 147-163

  Kurosawa, Junpei ^a   Nishiyori, Hiromi ^a   Hayashizaki, Yoshihide ^a  

^a RIKEN   (Japan)

Author keywords

Cap trap; DeepCAGE; High throughput sequencer; Transcription start sites; Transcriptome

Indexed keywords

COMPLEMENTARY DNA; PRIMER DNA;

ARTICLE; GENE EXPRESSION PROFILING; GENETICS; METHODOLOGY; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION;

BASE SEQUENCE; DNA PRIMERS; DNA, COMPLEMENTARY; GENE EXPRESSION PROFILING; POLYMERASE CHAIN REACTION;

MLCS; MLOWN;

EID: 79952277545     PISSN: 10643745     EISSN: 19406029     Source Type: Book Series    
DOI: 10.1007/978-1-60761-944-4_10     Document Type: Chapter

References (4)

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2. Maeda, N., Kasukawa, T., Oyama, R., et al. (2006) Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs. PLoS Genet 2, e62.
3. Hayashizaki, Y. and Carninci, P. (2006) Genome Network and FANTOM3: assessing the complexity of the transcriptome. PLoS Genet 2, e63.
4. de Hoon, M. and Hayashizaki, Y. (2008) Deep cap analysis gene expression (CAGE): genome-wide identification of promoters, quantification of their expression, and network inference. Biotechniques 44, 627–32.