One-step reverse transcription loop-mediated isothermal amplification assay for rapid detection of Cymbidium mosaic virus

Journal of Virological Methods

Volumn 173, Issue 1, 2011, Pages 43-48

  Lee, Meng Shiou ^a   Yang, Meng Ja ^a   Hseu, You Cheng ^a   Lai, Guan Hua ^a   Chang, Wen Te ^a   Hsu, Yau Heiu ^b   Lin, Ming Kuem ^a  

^a CHINA MEDICAL UNIVERSITY   (Taiwan)

^b NATIONAL CHUNG HSING UNIVERSITY   (Taiwan)

Author keywords

CymMV; Detection; Orchid; RT LAMP

Indexed keywords

ARTICLE; CONTROLLED STUDY; CYMBIDIUM MOSAIC VIRUS; GENE AMPLIFICATION; MOSAIC VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; ORCHIDACEAE; PRIORITY JOURNAL; REVERSE TRANSCRIPTION LOOP MEDIATED ISOTHERMAL AMPLIFICATION; SENSITIVITY AND SPECIFICITY; VIRAL PLANT DISEASE; VIRUS DETECTION; VIRUS GENE; VIRUS ISOLATION;

CONSERVED SEQUENCE; DNA PRIMERS; NUCLEIC ACID AMPLIFICATION TECHNIQUES; ORCHIDACEAE; PLANT DISEASES; POTEXVIRUS; RNA, VIRAL; SENSITIVITY AND SPECIFICITY; TEMPERATURE; VIROLOGY;

CYMBIDIUM MOSAIC VIRUS; ORCHIDACEAE;

EID: 79952194159     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2011.01.005     Document Type: Article

References (20)

1. Adams M.J., Accotto G.P., Agranovsky A.A., Bar-Joseph M., Boscia D., Brunt A.A., Candresse T., Coutts R.H.A., Dolja V.V., Falk B.W., Foster G.D., Gonsalves D., Jelkmann W., Karasev A., Martelli G.P., Mawassi M., Milne R.G., Minafra A., Namba S., Rowhani A., Vetten H.J., Vishnichenko V.K., Wisler G.C., Yoshikawa N., Zavriev S.K. Genus Potexvirus. Virus Taxonomy: Eighth Report of the International Committee on Taxonomy of Virus 2005, 1091-1095. Elsevier Academic Press, San Diego, CA. C.M. Fauquet, M.A. Mayo, J. Maniloff, U. Desselberger, L.A. Ball (Eds.).
2. Buates S., Bantuchai S., Sattabongkot J., Han E.T., Tsuboi T., Udomsangpetch R., Sirichaisinthop J., Tan-Ariya P. Development of a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) for clinical detection of Plasmodium falciparum gametocytes. Parasitol. Int. 2010, 59:414-420.
3. Chinese Materia Medica Dictionary. In: Jiangsu New Medical College (Ed.), Shanghai Sci. and Tech. House, 1985. Shanghai, pp. 1467-1471.
4. Eun A.J.C., Wong S.M. Detection of Cymbidium mosaic potexvirus and Odontoglossum ringspot tobamovirus using immuno-capillary zone electrophoresis. Phytopathology 1999, 89:522-528.
5. Eun A.J.C., Huang L., Chew F.T., Li S.F.Y., Wong S.M. Detection of two orchid viruses using quartz crystal microbalance-based DNA biosensors. Phytopathology 2002, 92:654-658.
6. Eun A.J.C., Seoh M.L., Wong S.M. Simultaneous quantitation of two orchid viruses by the TaqMan real-time RT-PCR. J. Virol. Methods 2000, 87:151-160.
7. Fukuta S., Iida T., Mizukami Y., Ishida A., Ueda J., Kanbe M., Ishimoto Y. Detection of Japanese yam mosaic virus by RT-LAMP. Arch. Virol. 2003, 148:1713-1720.
8. Fukuta S., Ohishi K., Yoshida K., Mizukami Y., Ishida A., Kanbe M. Development of immunocapture reverse transcription loop-mediated isothermal amplification for the detection of tomato spotted wilt virus from chrysanthemum. J. Virol. Methods 2004, 121:49-55.
9. Hu W.W., Wong S.M. The use of DIG-labelled cRNA probes for the detection of Cymbidium mosaic potexvirus (CymMV) and Odotonglossum ringspot tobamovirus (ORSV) in orchids. J. Virol. Methods 1998, 70:193-199.
10. Huang C.H., Lai G.H., Lee M.S., Lin W.H., Lien Y.Y., Hsueh S.C., Kao J.Y., Chang W.T., Lu T.C., Lin W.N., Chen H.J., Lee M.S. Development and evaluation of a loop-mediated isothermal amplification assay for rapid detection of chicken anaemia virus. J. Appl. Microbiol. 2010, 108:917-924.
11. Lin M.K., Hu C.C., Lin N.S., Chang B.Y., Hsu Y.H. Movement of potexviruses requires species-specific interactions among the cognate triple gene block proteins, as revealed by a trans-complementation assay based on the bamboo mosaic virus satellite RNA-mediated expression system. J. Gen. Virol. 2006, 87:1357-1367.
12. Lin M.K., Chang B.Y., Liao J.T., Lin N.S., Hsu Y.H. Arg-16 and Arg-21 in the N-terminal region of the triple-gene-block protein 1 of bamboo mosaic virus are essential for virus movement. J. Gen. Virol. 2004, 85:251-259.
13. Notomi T., Okayama H., Masubuchi H., Yonekawa T., Watanabe K., Amino N., Hase T. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 2000, 28:e63.
14. Ryu K.H., Yoon K.E., Park W.M. Detection by RT-PCR of Cymbidium mosaic virus in orchids. J. Phytopathol. 1995, 143:643-646.
15. Seoh M.L., Wong S.M., Zhang L. Simultaneous TD/RT-PCR detection of cymbidium mosaic potexvirus and odontoglossum ringspot tobamovirus with a single pair of primer. J. Virol. Methods 1998, 72:197-204.
16. Tanaka S., Nishii H., Ito S., Kameyaiwaki M., Sommartya P. Detection of Cymbidium mosaic potexvirus and Odontoglossum ringspot tobamovirus from Thai orchids by rapid immunofilter paper assay. Plant Dis. 1997, 81:167-170.
17. Tang W., Eisenbrand G. Chinese Drugs of Plant Origin 1992, Springer, New York.
18. Varga A., James D. Use of reverse transcription loop-mediated isothermal amplification for the detection of Plum pox virus. J. Virol. Methods 2006, 138:184-190.
19. Wong S.M., Chng C.G., Lee Y.H., Tan K., Zettler F.W. Incidence of cymbidium mosaic and odontoglossum ringspot viruses and their significance in orchid cultivation in Singapore. Crop. Protect. 1994, 13:235-239.
20. Zettler F.W., Ko N.J., Wisler G.C., Elliott M.S., Wong S.M. Viruses of Orchids and their control. Plant Dis. 1990, 74:621-626.