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Physics of Life Reviews
Volumn 8, Issue 1, 2011, Pages 67-68
Intrinsic structural variability of DNA allows multiple genomic encoding for nucleosomes. Comment on "Cracking the chromatin code: Precise rule of nucleosome positioning" by E.N. Trifonov
Author keywords

[No Author keywords available]
Indexed keywords

DNA;
EID: 79952187545     PISSN: 15710645     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plrev.2011.02.002     Document Type: Note
Times cited : (1)
References (7)
  • 1
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    • Cracking the chromatin code: precise rule of nucleosome positioning
    • [in this issue]
    • Trifonov E.N. Cracking the chromatin code: precise rule of nucleosome positioning. Phys Life Rev 2011, 8(1):39-50. [in this issue].
    • (2011) Phys Life Rev , vol.8 , Issue.1 , pp. 39-50
    • Trifonov, E.N.1
  • 2
    • 77950361329 scopus 로고    scopus 로고
    • Are nucleosome positions in vivo primarily determined by histone-DNA sequence preferences?
    • Stein E., Takasuka T.E., Collings C.K. Are nucleosome positions in vivo primarily determined by histone-DNA sequence preferences?. Nucleic Acids Res 2010, 38:709-719.
    • (2010) Nucleic Acids Res , vol.38 , pp. 709-719
    • Stein, E.1    Takasuka, T.E.2    Collings, C.K.3
  • 3
    • 66349114339 scopus 로고    scopus 로고
    • Small local variations in B-form DNA lead to a large variety of global geometries which can accommodate most DNA-binding protein motifs
    • Marathe A., Karandur D., Bansal M. Small local variations in B-form DNA lead to a large variety of global geometries which can accommodate most DNA-binding protein motifs. BMC Struct Biol 2009, 9:24.
    • (2009) BMC Struct Biol , vol.9 , pp. 24
    • Marathe, A.1    Karandur, D.2    Bansal, M.3
  • 4
    • 70450248170 scopus 로고    scopus 로고
    • A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA
    • Lavery R., Zakrzewska K., Beveridge D., Bishop T.C., Case D.A., Cheatham T.E., et al. A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA. Nucleic Acids Res 2009, 38:299-313.
    • (2009) Nucleic Acids Res , vol.38 , pp. 299-313
    • Lavery, R.1    Zakrzewska, K.2    Beveridge, D.3    Bishop, T.C.4    Case, D.A.5    Cheatham, T.E.6
  • 5
    • 78650776665 scopus 로고    scopus 로고
    • An ensemble of B-DNA dinucleotide geometries lead to characteristic nucleosomal DNA structure and provide plasticity required for gene expression
    • Marathe A., Bansal M. An ensemble of B-DNA dinucleotide geometries lead to characteristic nucleosomal DNA structure and provide plasticity required for gene expression. BMC Struct Biol 2011, 11:1.
    • (2011) BMC Struct Biol , vol.11 , pp. 1
    • Marathe, A.1    Bansal, M.2
  • 6
    • 3042621005 scopus 로고    scopus 로고
    • Nucleosome conformational flexibility and implications for chromatin dynamics
    • Sivolob A., Prunell A. Nucleosome conformational flexibility and implications for chromatin dynamics. Phil Trans R Soc A 2004, 362:1519-1547.
    • (2004) Phil Trans R Soc A , vol.362 , pp. 1519-1547
    • Sivolob, A.1    Prunell, A.2
  • 7
    • 33749259954 scopus 로고    scopus 로고
    • Kinking occurs during molecular dynamics simulations of small DNA minicircles
    • Lankas F., Lavery R., Maddocks J.H. Kinking occurs during molecular dynamics simulations of small DNA minicircles. Structure 2006, 14:1527-1534.
    • (2006) Structure , vol.14 , pp. 1527-1534
    • Lankas, F.1    Lavery, R.2    Maddocks, J.H.3

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.