Probabilistic peak calling and controlling false discovery rate estimations in transcription factor binding site mapping from ChIP-seq.

Methods in molecular biology (Clifton, N.J.)

Volumn 674, Issue , 2010, Pages 161-177

  Jiao, Shuo ^a   Bailey, Cheryl P ^b   Zhang, Shunpu ^b   Ladunga, Istvan ^b  

^a Fred Hutchinson Cancer Research Center   (United States)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

GA BINDING PROTEIN; TRANSCRIPTION FACTOR;

ARTICLE; BINDING SITE; CHROMATIN IMMUNOPRECIPITATION; COMPUTER PROGRAM; DNA SEQUENCE; GENETICS; HUMAN; INTERNET; LABORATORY DIAGNOSIS; LEUKEMIA CELL LINE; METABOLISM; PROBABILITY; REGULATORY SEQUENCE; REPRODUCIBILITY;

BINDING SITES; CHROMATIN IMMUNOPRECIPITATION; FALSE POSITIVE REACTIONS; GA-BINDING PROTEIN TRANSCRIPTION FACTOR; HUMANS; INTERNET; JURKAT CELLS; PROBABILITY; REGULATORY SEQUENCES, NUCLEIC ACID; REPRODUCIBILITY OF RESULTS; SEQUENCE ANALYSIS, DNA; SOFTWARE; TRANSCRIPTION FACTORS;

MLCS; MLOWN;

EID: 79952112441     PISSN: None     EISSN: 19406029     Source Type: Journal    
DOI: 10.1007/978-1-60761-854-6_10     Document Type: Article

References (0)